One Fungus One Name (1F=1N) on yeasts
| Project/Area Number |
26650148
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| Research Category |
Grant-in-Aid for Challenging Exploratory Research
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| Allocation Type | Multi-year Fund |
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| Research Field |
Biodiversity/Systematics
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| Research Institution | Institute of Physical and Chemical Research |
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Principal Investigator |
Takashima Masako 国立研究開発法人理化学研究所, バイオリソースセンター, ユニットリーダー (20333304)
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| Co-Investigator(Renkei-kenkyūsha) |
ENDOH Rikiya 国立研究開発法人理化学研究所, バイオリソースセンター, 協力研究員 (90634494)
SUGITA Takashi 明治薬科大学, 薬学部, 教授 (10312076)
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| Research Collaborator |
MANABE Ri-ichiro 国立研究開発法人理化学研究所, ライフサイエンス技術基盤研究センター, 上級研究員 (30280837)
IWASAKI Wataru 東京大学, 理学(系)研究科(研究院), 准教授 (50545019)
OHKUMA Moriya 国立研究開発法人理化学研究所, バイオリソースセンター, 室長 (10270597)
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| Project Period (FY) |
2014-04-01 – 2017-03-31
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| Project Status |
Completed (Fiscal Year 2016)
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| Budget Amount *help |
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
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| Keywords | One Fungus One Name / メルボルン規約 / 酵母分類 / 系統樹 / ハイブリッドゲノム / Trichosporonales目 / Trichosporon属 / ゲノム分類 / 酵母分類学 / Trichosporonales / ハラタケ亜門 / サビキン亜門 / One fungus one name / Trichosporon |
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| Outline of Final Research Achievements |
According to the "One Fungus = One Name (1F=1N)" principle implemented by the Code of Nomenclature for algae, fungi, and plants (Melbourne code), yeast phylogeny is studied to reclassify the polyphyletic taxa under the collaboration with the yeast taxonomic community in the world. For making a backbone tree with high quality, we constructed phylogenetic trees based on (1) the 30 orthologous genes selected from draft genome data and (2) whole genomes, using the Trichosporonales species as an example. We also introduced to use the genome data for obtaining the traits/properties that distinguish one genus from the other, as anamorphic yeast taxa generally lack the morphological characteristic which has been employed for the most important taxonomic criterion in fungi. The data obtained suggests that our strategy would contribute to the taxonomy for other yeast taxa.
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Report
(4 results)
Research Products
(16 results)
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[Journal Article] Selection of orthologous genes for construction of a highly resolved phylogenetic tree and clarification of the phylogeny of Trichosporonales species.2015
Author(s)
Takashima, M., Manabe, R., Iwasaki, W., Ohyama, A., Ohkuma, M., and Sugita, T.
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Journal Title
PLOS ONE
Volume: 10
Issue: 8
Pages: e0131217-e0131217
DOI
Related Report
Peer Reviewed / Open Access / Acknowledgement Compliant
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[Journal Article] Phylogeny of yeasts and related filamentous fungi within Pucciniomycotina determined from multigene sequence analyses.2015
Author(s)
Wang, Q.-M., Groenewald, M., Takashima, M., Theelen, B., Han, P.-J., Liu, X.-Z., Boekhout, T., and Bai, F.-Y.
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Journal Title
Stud. Mycol.
Volume: 81
Issue: 1
Pages: 27-53
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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