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Development of an acaricide resistance gene linkage mapping method

Research Project

Project/Area Number 26660042
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Plant protection science
Research InstitutionKyoto University

Principal Investigator

Osakabe Masahiro  京都大学, 農学研究科, 准教授 (50346037)

Research Collaborator Thomas Vanleeuwen  University of Amsterdam, Institute for Biodiversity and Ecosystem Dynamics, Associate Professor
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2015: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2014: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywordsハダニ / ゲノム / 染色体地図 / 薬剤抵抗性 / 遺伝子マーカー / ゲノム構造 / 連鎖地図 / QTL / ダニゲノム / 殺ダニ剤抵抗性 / ピリダベン抵抗性 / ナミハダニ
Outline of Final Research Achievements

Development of a new method analyzing acaricide resistance factor using genome mapping in the two-spotted spider mite was aimed in this study. To construct genome map, genetic linkages among microsatellite (SSR) loci, which position in scaffolds had been determined, were analyzed in the two-spotted spider mite. Consequently, 26 scaffolds of 40 largest scaffolds (> 90% of a hole genome) were mapped into the resulting five linkage groups of SSRs.
Resistance genes to pyridaben, a mitochondrial electron transport complex I inhibitors, was analyzed by QTL analysis. A significant QTL was indicated at scaffold 7 where PSST gene, a component of the complex I, existed, and the significant QTL area was extended to the next 10 cM, where one pseudo and five full-length cytochrome P450 monooxygenase genes were found. Previous studies suggested involvement of pyridaben resistance with cytochrome P450 functions.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (13 results)

All 2017 2016 2015 2014 Other

All Int'l Joint Research (5 results) Journal Article (3 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 3 results,  Acknowledgement Compliant: 3 results) Presentation (5 results) (of which Int'l Joint Research: 1 results,  Invited: 2 results)

  • [Int'l Joint Research] Ghent University(Belgium)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] University of Amsterdam(オランダ)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] University of Crete/Institute Mol. Biol. & Biotechnol./Agricultural University of Athens(Greece)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] ゲント大学(ベルギー)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] アムステルダム大学(オランダ)

    • Related Report
      2015 Research-status Report
  • [Journal Article] A mutation in the PSST homologue of complex I (NADH:ubiquinone oxidoreductase) from Tetranychus urticae is associated with resistance to METI acaricides.2017

    • Author(s)
      Bajda, S., W. Dermauw, R. Panteleri, N. Sugimoto, V. Douris, L. Tirry, M. Osakabe, J. Vontas, T. Van Leeuwen
    • Journal Title

      Insect Biochemistry and Molecular Biology

      Volume: 80 Pages: 79-90

    • DOI

      10.1016/j.ibmb.2016.11.010

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Combination of restriction endonuclease digestion with the ΔΔCt method in realtime PCR to monitor etoxazole resistance allele frequency in the two-spotted spider mite2017

    • Author(s)
      Osakabe, M., T. Imamura, R. Nakano, S. Kamikawa, M. Tadatsu, Y. Kunimoto, M. Doi
    • Journal Title

      Pesticide Biochemistry and Physiology

      Volume: in press Pages: 1-8

    • DOI

      10.1016/j.pestbp.2017.04.003

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Molecular analysis of cyenopyrafen resistance in the two-spotted spider mite Tetranychus urticae.2016

    • Author(s)
      Khalighi, M., W. Dermauw, N. Wybouw, S. Bajda, M. Osakabe, L. Tirry and T. Van Leeuwen
    • Journal Title

      Pest Management Science

      Volume: 72 Issue: 1 Pages: 103-112

    • DOI

      10.1002/ps.4071

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] QTL解析によるピリダベン抵抗性遺伝子のナミハダニゲノムへのマッピング2016

    • Author(s)
      刑部正博・杉本直也・井尻悠士・上樂明也・S. Bajda・T. Van Leeuwen
    • Organizer
      日本昆虫学会第76回大会・第60回日本応用動物昆虫学会・合同大会
    • Place of Presentation
      大阪府立大学
    • Year and Date
      2016-03-26
    • Related Report
      2015 Research-status Report
  • [Presentation] Recent progress in the linkage analysis among scaffolds in T. urticae genome2015

    • Author(s)
      M. Osakabe
    • Organizer
      7th spider mite genome meeting
    • Place of Presentation
      Hostal Empurias (Catalunia, Spain)
    • Year and Date
      2015-09-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] ピリダベン抵抗性における卵限定的母性効果発現機構の解析2015

    • Author(s)
      井尻悠士, 刑部正博, T. Van Leeuwen
    • Organizer
      第59回日本応用動物昆虫学会大会
    • Place of Presentation
      山形市
    • Year and Date
      2015-03-26 – 2015-03-28
    • Related Report
      2014 Research-status Report
  • [Presentation] Adaptation to acaricide and UV radiation in spider mites.2014

    • Author(s)
      M. Osakabe
    • Organizer
      6th Spider Mite Genome Meeting
    • Place of Presentation
      Ibiza, Spain
    • Year and Date
      2014-10-06 – 2014-10-10
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Combination between classical genetic mapping tools and genomics in acaricide resistance study2014

    • Author(s)
      M. Osakabe, N. Sugimoto and R. Uesugi
    • Organizer
      XIV International Congress of Acarology
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2014-07-14 – 2014-07-18
    • Related Report
      2014 Research-status Report
    • Invited

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Published: 2014-04-04   Modified: 2022-02-16  

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