• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Comparative genomic study of the symbiotic genes of rhizobia with legumes

Research Project

Project/Area Number 26660057
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Applied microbiology
Research InstitutionThe University of Tokyo

Principal Investigator

Aoki Seishiro  東京大学, 大学院理学系研究科(理学部), 特任研究員 (10334301)

Co-Investigator(Kenkyū-buntansha) 伊藤 元己  東京大学, 大学院総合文化研究科, 教授 (00193524)
Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords分子進化 / 共生 / 窒素固定 / 根粒 / 水平移行 / 平行進化 / 遺伝子重複 / 機能進化 / 遺伝子機能進化 / 進化 / 生物情報学 / 系統学 / 植物生理学 / 多様性 / 植物微生物相互作用 / 植物-微生物相互作用
Outline of Final Research Achievements

The symbiosis of nitrogen-fixing bacteria with plants is a widespread and important phenomenon in ecosystems. The genes for this symbiosis have ever been found with genetic analysis. It has been thought that the symbiotic genes passed though different evolutionary pathways from the other housekeeping genes and have characteristic features in the molecular evolution. We searched for these genes using the analysis of microbial comparative genomics and revealed that several symbiotic genes might have originated from the gene duplication of the housekeeping genes in bacteria. We also found that new evolutionary phenomena such as parallel evolution of symbiosis function, convergent evolution of gene order, and gene conversion in several symbiotic genes.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (12 results)

All 2017 2016 2015 2014

All Journal Article (4 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 4 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (7 results) Book (1 results)

  • [Journal Article] Function and evolution of a Lotus japonicas AP2/ERF family transcription factor that is required for development of infection threads2017

    • Author(s)
      Yano K, Aoki S, Liu M, Umehara Y, Suganuma N, Iwasaki W, Sato S, Soyano T, Kouchi H, Kawaguchi M
    • Journal Title

      DNA Research

      Volume: 印刷中 Pages: 193-203

    • DOI

      10.1093/dnares/dsw052

    • Related Report
      2017 Annual Research Report 2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Wide distribution range of rhizobial symbionts associated with pantropical sea-dispersed legumes2016

    • Author(s)
      Masaru Bamba, Sayuri Nakata, Seishiro Aoki, Koji Takayama, Juan Nunez Farfan,Motomi Ito, Masaki Miya, Tadashi Kajita
    • Journal Title

      Antonie van Leeuwenhoek

      Volume: 109 Issue: 12 Pages: 1605-1614

    • DOI

      10.1007/s10482-016-0761-y

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Phylogenetic analysis of NAP, an unconventional actin of the Volvocales2015

    • Author(s)
      Takako Kato-Minoura, Kumiko Karino, Nobuyuki Akimoto, Norito Yoshiga, Mika Ehara, Seishiro Aoki
    • Journal Title

      Plant Systematics and Evolution

      Volume: 301 Issue: 6 Pages: 1725-1733

    • DOI

      10.1007/s00606-014-1187-5

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Evolutionary dynamics of nitrogen fixation in the legume-rhizobia symbiosis.2014

    • Author(s)
      Fujita, H., Aoki, S., and Kawaguchi, M.
    • Journal Title

      PLoS One

      Volume: 9 Issue: 4 Pages: e93670-e93670

    • DOI

      10.1371/journal.pone.0093670

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 西表島海浜土壌に含まれる根粒菌群集2017

    • Author(s)
      番場大, 青木誠志郎, 高山浩司, 伊藤元己, 宮正樹, 梶田忠
    • Organizer
      日本植物分類学会 京都大会
    • Place of Presentation
      京都大学 (京都府京都市左京区)
    • Year and Date
      2017-03-09
    • Related Report
      2016 Research-status Report
  • [Presentation] 日本各地の野生ミヤコグサに共生する根粒菌の単離と系統解析2017

    • Author(s)
      番場 大、青木 誠志郎、梶田 忠、瀬戸口 浩彰、綿野 泰行、佐藤 修正、土松 隆志
    • Organizer
      日本進化学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 日本各地の野生ミヤコグサ(Lotus japonicus)に共生している根粒菌の系統解析2017

    • Author(s)
      番場 大、青木 誠志郎、梶田 忠、瀬戸口 浩彰、綿野 泰行、佐藤 修正、土松 隆志
    • Organizer
      日本植物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ヒメハギ科カスミヒメハギ(Polygala paniculata L.)の根粒共生進化研究に向けた種特性の解析.2017

    • Author(s)
      徳本雄史、征矢野敬、青木誠志郎、福原舞、中川知己、横山潤、藤田浩徳、川口正代司
    • Organizer
      日本植物学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 日本各地より採集された野生ミヤコグサに共生する根粒菌の系統解析2017

    • Author(s)
      番場 大、青木 誠志郎、梶田 忠、瀬戸口 浩彰、綿野 泰行、佐藤 修正、土松 隆志
    • Organizer
      植物微生物研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 遺伝子重複・GC含量変化・分子進化加速・水平伝播による根粒菌共生遺伝子nodIJの誕生と進化2015

    • Author(s)
      青木誠志郎、伊藤元己、岩崎渉
    • Organizer
      日本進化学会
    • Place of Presentation
      中央大学後楽園キャンパス ( 東京都文京区 )
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
  • [Presentation] 海浜土壌におけるマメ科植物の根粒菌相の解析2015

    • Author(s)
      番場大・青木意義志郎・高山浩司・伊藤元己・宮正樹・梶田忠
    • Organizer
      日本植物分類学会
    • Place of Presentation
      福島大学金谷川キャンパス(福島県)
    • Year and Date
      2015-03-06 – 2015-03-08
    • Related Report
      2014 Research-status Report
  • [Book] 進化の謎をゲノムで解く2015

    • Author(s)
      藤田浩徳,青木誠志郎,川口正代司
    • Total Pages
      199
    • Publisher
      学研メデイカル秀潤社
    • Related Report
      2015 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2019-03-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi