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Development of easy red-tide diagnostic kit using NASBA and nucleic-acid chromatography.

Research Project

Project/Area Number 26660155
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Aquatic bioproduction science
Research InstitutionJapan Fisheries Research and Education Agency

Principal Investigator

Tomaru Yuji  国立研究開発法人水産総合研究センター, 瀬戸内海区水産研究所, 主任研究員 (10416042)

Co-Investigator(Kenkyū-buntansha) KIMURA Kei  佐賀大学, 低平地沿岸海域研究センター, 講師 (30612676)
Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords珪藻 / ノリ / 赤潮 / NASBA法 / 核酸クロマトグラフ / 発現解析 / 生理 / 生理状態診断 / 赤潮診断
Outline of Final Research Achievements

We designed NASBA primers and nucleic acid-chromatography probes for detecting alkaline phosphatase (AP) gene and actin gene as house-keeping of the bloom-forming diatom Chaetoceros tenuissimus. The results showed that the intense signal of the AP gene expressions were successfully detected by the nucleic acid-chromatography, when the diatoms were under phosphate limited conditions. This device would be useful to detect gene expression of phytoplanktons. We also identified nitrogen, phosphorus metabolism related and house-keeping genes of the seaweed Nori. Furthermore, data for RNA sequences of the fish killing dinoflagellate Karenia mikimotoi were accumulated. These knowledge may contribute to develop an easy diagnostic method for gene expressions of marine algae.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (5 results)

All 2016 2015 2014 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (2 results) Book (1 results) Remarks (1 results)

  • [Journal Article] RNA sequencing revealed numerous polyketide synthase genes in the harmful dinoflagellate Karenia mikimotoi2015

    • Author(s)
      Kimura K, Okuda S, Nakayama K, Shikata T, Takahashi F, Yamaguchi H, Sakamoto S, Yamaguchi M, Tomaru Y
    • Journal Title

      PLOS One

      Volume: 10 Issue: 11 Pages: 0142731-0142731

    • DOI

      10.1371/journal.pone.0142731

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] NASBA法と核酸クロマトグラフを用いた赤潮原因珪藻の簡易生理状態判定キットの開発~リン酸塩欠乏状態の場合~2016

    • Author(s)
      外丸 裕司・山口晴生・木村圭・滝野ちあき・宇治家武史
    • Organizer
      日本水産学会
    • Place of Presentation
      東京海洋大学(品川キャンパス)
    • Year and Date
      2016-03-29
    • Related Report
      2015 Annual Research Report
  • [Presentation] 渦鞭毛藻Karenia mikimotoiの網羅的遺伝子発現解析に基づく毒素生合成関連遺伝子群の探索2014

    • Author(s)
      木村圭
    • Organizer
      日本水産学会
    • Place of Presentation
      九州大学箱崎キャンパス
    • Year and Date
      2014-09-21
    • Related Report
      2014 Research-status Report
  • [Book] 有害有毒プランクトンの科学2016

    • Author(s)
      外丸裕司・白石智考
    • Total Pages
      352
    • Publisher
      恒星社厚生閣
    • Related Report
      2015 Annual Research Report
  • [Remarks] 珪藻ウイルスの生態学的研究

    • URL

      http://feis.fra.affrc.go.jp/keisou_Virus/members_tomaru.html

    • Related Report
      2015 Annual Research Report

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Published: 2014-04-04   Modified: 2017-05-10  

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