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The analysis of the gut microbiota change in severe emergency patients via high-throughput DNA sequencing

Research Project

Project/Area Number 26670788
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Emergency medicine
Research InstitutionOsaka University

Principal Investigator

Masahiro Ojima  大阪大学, 医学部附属病院, 医員 (70721091)

Co-Investigator(Kenkyū-buntansha) 吉矢 和久  大阪大学, 医学部附属病院, 助教 (40379201)
山田 知輝  大阪大学, 医学系研究科, 特任研究員 (40623434)
嶋津 岳士  大阪大学, 医学系研究科, 教授 (50196474)
小倉 裕司  大阪大学, 医学系研究科, 准教授 (70301265)
中村 洋平  大阪大学, 医学部附属病院, 医員 (80644004)
新谷 歩  大阪大学, 医学系研究科, 寄附講座教授 (00724395)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2016: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2015: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2014: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords腸内細菌叢 / 重症患者 / 高処理シークエンサー / 抗生物質 / 重症度 / シークエンサー / バクテロイデス / ファーミキューティス / OTU
Outline of Final Research Achievements

It has been shown that the gut microbiota plays an important role in the whole body immune system and it may affect patient's prognosis and infectious complications in emergency patients. In recent years, it has become possible to analyze comprehensive bacterial mirobiota by high-throughput sequencer. This study revealed the dynamic gut microbiota changes in the acute phase of severe emergency patients and that the antibiotics and the severity of the disease had some effect on gut microbiota change. Also, it was revealed that each patient had a unique gut microbiota at the time of arrival and that the gut microbiota shifted especially up to one week after hospitalization, and thereafter it shifted to a new and static state. It was also shown that the deviation of excessive intestinal flora may adversely affect the life prognosis of the host patient.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (5 results)

All 2016 2015

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (3 results)

  • [Journal Article] プロバイオティクス・プレバイオティクス2016

    • Author(s)
      清水健太郎、小島将裕、小倉裕司、嶋津岳士
    • Journal Title

      日本静脈経腸学会雑誌

      Volume: 31 Pages: 797-802

    • NAID

      130005158198

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Metagenomic analysis reveals dynamic changes of whole gut microbiota in the acute phase of intensive care unit patients2015

    • Author(s)
      Masahiro Ojima, Daisuke Motooka, Kentaro Shimizu, Kazuyoshi Gotoh, Ayumi Shintani, Kazuhisa Yoshiya, Shota Nakamura, Hiroshi Ogura, Tetsuya Iida, Takeshi Shimazu
    • Journal Title

      Digestive Diseases and Sciences

      Volume: online Issue: 6 Pages: 1-7

    • DOI

      10.1007/s10620-015-4011-3

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 高処理シーケンサーを用いた重症救急患者における腸内細菌叢の網羅的評価2016

    • Author(s)
      小島将裕、清水健太郎、元岡大祐、石原拓磨、吉矢和久、小倉裕司、中村昇太、新谷歩、嶋津岳士
    • Organizer
      第44回日本救急医学会
    • Place of Presentation
      グランドプリンスホテル新高輪
    • Year and Date
      2016-11-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] 重症病態における腸内細菌叢の変化と腸管内治療による予後改善の可能性2015

    • Author(s)
      小島将裕、清水健太郎、吉矢和久、小倉裕司、嶋津岳士
    • Organizer
      第43回日本救急医学会総会・学術集会
    • Place of Presentation
      東京国際フォーラム・東京都・千代田区
    • Year and Date
      2015-10-21
    • Related Report
      2015 Research-status Report
  • [Presentation] High-throughput DNA sequencing reveals dynamic change of gut microbiota in ICU patients2015

    • Author(s)
      Masahiro Ojima
    • Organizer
      Society of Critical Care Medicine's ( SCCM)
    • Place of Presentation
      Phenix Convention Center
    • Year and Date
      2015-01-17 – 2015-01-21
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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