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Establishment of novel diagnostic method in oral candidiasis using LH-PCR and next-generation sequencing

Research Project

Project/Area Number 26670868
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Surgical dentistry
Research InstitutionKyushu University

Principal Investigator

Moriyama Masafumi  九州大学, 歯学研究院, 助教 (20452774)

Co-Investigator(Kenkyū-buntansha) 竹下 徹  九州大学, 歯学研究院, 准教授 (50546471)
中村 誠司  九州大学, 歯学研究院, 教授 (60189040)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2016: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywords口腔カンジダ症 / 次世代シーケンサー / LH-PCR法 / 診断方法 / 加齢 / Candida albicans / Candida dubliniensis
Outline of Final Research Achievements

The widespread use of empiric and prophylactic antifungal drugs has caused a shift in fungal biodiversity towards other Candida. We thus used NGS to examine the oral fungal biodiversity of 27 patients with pseudomembranous oral candidiasis (POC) and 66 healthy controls. The total number of fungal species in patients with POC and healthy controls was 67 and 86, respectively. The copy number of total PCR products and the proportion of non-C. albicans, especially C. dubliniensis, in patients with POC, were higher than those in healthy controls. The detection patterns in patients with POC were similar to those in controls after antifungal treatment. Interestingly, the number of fungal species and the copy number of total PCR products in healthy controls increased with aging. These results suggest that high fungal biodiversity and aging might be involved in the pathogenesis of oral candidiasis. We therefore conclude that NGS is a useful technique for investigating oral candida infections.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (4 results)

All 2016 2015 2014

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (2 results)

  • [Journal Article] Molecular analysis of fungal populations in patients with oral candidiasis using next-generation sequencing2016

    • Author(s)
      Imabayashi Y, Moriyama M, Takeshita T, Ieda S, Hayashida JN, Tanaka A, Maehara T, Furukawa S, Ohta M, Kubota K, Yamauchi M, Ishiguro N, Yamashita Y, Nakamura S
    • Journal Title

      Sci Rep

      Volume: 6 Issue: 1 Pages: 28110-28110

    • DOI

      10.1038/srep28110

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Molecular analysis of fungal populations in patients with oral candidiasis using internal transcribed spacer region.2014

    • Author(s)
      Ieda S, Moriyama M, Takeshita T, Maehara T, Imabayashi Y, Shinozaki S, Tanaka A, Hayashida JN, Furukawa S, Ohta M,Yamashita Y, Nakamura S
    • Journal Title

      PLoS One

      Volume: 30 Issue: 6 Pages: e101156-e101156

    • DOI

      10.1371/journal.pone.0101156

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 次世代シーケンサーを用いた口腔カンジダ症患者における口腔内真菌叢の網羅的解析2015

    • Author(s)
      今林 佑美、森山 雅文、竹下 徹、家田 晋輔、山下 喜久、中村 誠司
    • Organizer
      第63回国際歯科研究学会日本部会総会・学術大会
    • Place of Presentation
      福岡
    • Year and Date
      2015-10-30
    • Related Report
      2015 Research-status Report
  • [Presentation] 口腔カンジダ症の新たな診断と治療法確立の試み2014

    • Author(s)
      家田 晋輔、森山 雅文、篠崎 昌一、林田 淳之介、前原 隆、大山 恵子、中村 誠司
    • Organizer
      第11回 口腔ケア学会総会・学術集会
    • Place of Presentation
      旭川
    • Year and Date
      2014-06-29
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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