Profiling of disease factors in human microbiome
Project/Area Number |
26700029
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Research Category |
Grant-in-Aid for Young Scientists (A)
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Allocation Type | Partial Multi-year Fund |
Research Field |
Life / Health / Medical informatics
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Research Institution | Niigata University |
Principal Investigator |
Okuda Shujiro 新潟大学, 医歯学系, 准教授 (00512310)
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Project Period (FY) |
2014-04-01 – 2018-03-31
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Project Status |
Completed (Fiscal Year 2017)
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Budget Amount *help |
¥24,570,000 (Direct Cost: ¥18,900,000、Indirect Cost: ¥5,670,000)
Fiscal Year 2017: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2016: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2015: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2014: ¥8,190,000 (Direct Cost: ¥6,300,000、Indirect Cost: ¥1,890,000)
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Keywords | 腸内細菌 / マイクロバイオーム / メタゲノム / 種間相互作用 / 共生細菌叢 |
Outline of Final Research Achievements |
An important factor in promoting the research of human microbiome including gut microbiome is to estimate what interaction between bacteria are needed and how bacterial community are built. We have developed the fundamental method that is necessary for that purpose. We infer the interaction points on the metabolic pathways which are likely to be responsible for the interaction among bacteria and also developed a method to estimate the bacterial interaction network based on these interaction points. This makes it possible to analyze and visualize the relationships between bacteria in complex microbiome systems.
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Report
(5 results)
Research Products
(12 results)
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[Journal Article] Genomic landscape of colorectal cancer in Japan: Clinical implications of comprehensive genomic sequencing for precision medicine.2016
Author(s)
Nagahashi M, Wakai T, Shimada Y, Ichikawa H, Kameyama H, Kobayashi T, Sakata J, Sato N, Kitagawa Y, Uetake H, Yoshida K, Oki E, Kudo S, Izutsu H, Komada K, Nakada M, Tse J, Russell M, Heyer J, Powers W, Sun R, Ring J. E, Takabe K, Protopopov A, Ling Y, Okuda S, Lyle S.
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Journal Title
Genome Medicine
Volume: 8
Issue: 1
Pages: 136-136
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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