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Development of Digital Nanochannels for Single Cell Omics

Research Project

Project/Area Number 26706010
Research Category

Grant-in-Aid for Young Scientists (A)

Allocation TypePartial Multi-year Fund
Research Field Nano/Microsystems
Research InstitutionOsaka Prefecture University

Principal Investigator

Xu Yan  大阪府立大学, 工学(系)研究科(研究院), 准教授 (90593898)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥23,270,000 (Direct Cost: ¥17,900,000、Indirect Cost: ¥5,370,000)
Fiscal Year 2016: ¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Fiscal Year 2015: ¥7,150,000 (Direct Cost: ¥5,500,000、Indirect Cost: ¥1,650,000)
Fiscal Year 2014: ¥12,740,000 (Direct Cost: ¥9,800,000、Indirect Cost: ¥2,940,000)
Keywordsデジタル化ナノチャネル / 単一細胞オミクス / 細胞計測 / ハイスループット計測 / Nano-in-Nano集積化 / ナノ流体デバイス / 1分子計測
Outline of Final Research Achievements

In this study, we established technology base for the proof-of-concept of a new technology called digital nanochannel (DN), which was proposed by us and holds great potential allowing single cell omics analysis at the single molecule level. First, the basic technology for fabricating nanofluidic chips with precise, high density, stable DN structures was developed. Second, the mechanism of signal detection for single molecule counting by DN was confirmed. Third, fundamental technologies to improve the performance of single molecule detection by DN, such as suppression of nonspecific protein adsorption in DN and regeneration of DN chips, were further established. These results promise that DN could be a powerful tool for single cell omics studies after further development in the future.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (51 results)

All 2017 2016 2015 2014 Other

All Journal Article (14 results) (of which Peer Reviewed: 12 results,  Acknowledgement Compliant: 11 results,  Open Access: 4 results) Presentation (34 results) (of which Int'l Joint Research: 13 results,  Invited: 12 results) Remarks (2 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] On-Chip Cell Preservation by Using a Phospholipid Polymer Hydrogel2016

    • Author(s)
      許 岩
    • Journal Title

      Journal of the Japan Society of Colour Material

      Volume: 89 Issue: 5 Pages: 154-158

    • DOI

      10.4011/shikizai.89.154

    • NAID

      130005405104

    • ISSN
      0010-180X, 1883-2199
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] ナノ流路で開閉可能な超微小スマートバルブ──フェムトリットル単位の液体を自在に制御2016

    • Author(s)
      許 岩,原田 敦史
    • Journal Title

      化学

      Volume: 71 Pages: 36-39

    • NAID

      40020883700

    • Related Report
      2016 Annual Research Report
  • [Journal Article] 1兆分の1 mLの水を自在に制御できる技術2016

    • Author(s)
      許 岩
    • Journal Title

      自動車技術 (「超の世界」)

      Volume: 70 Pages: 122-123

    • Related Report
      2016 Annual Research Report
    • Acknowledgement Compliant
  • [Journal Article] Antifouling Surface Modification of Nanochannels Using a Silanized Phospholipid Monomer2016

    • Author(s)
      Xu Y., Wu Q
    • Journal Title

      Proceedings of Micro Total Analysis Systems 2016

      Volume: 1 Pages: 1152-1153

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Bridging world-to-nanofluidics interfaces through nano-in-nano integration technology2016

    • Author(s)
      Xu Y.
    • Journal Title

      IEEE Micro-NanoMechatronics and Human Science (MHS), 2016 International Symposium on

      Volume: 1 Pages: 16603900-16603900

    • DOI

      10.1109/mhs.2016.7824225

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Soft Matter-Regulated Active Nanovalves Locally Self-Assembled in Femtoliter Nanofluidic Channels2016

    • Author(s)
      Yan Xu, Misato Shinomiya, Atsushi Harada
    • Journal Title

      Advanced Materials

      Volume: 28 Issue: 11 Pages: 2209-2216

    • DOI

      10.1002/adma.201505132

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Spontaneous packaging and hypothermic storage of mammalian cells with a cell-membrane-mimetic polymer hydrogel in a microchip2015

    • Author(s)
      Y.Xu, K.Mawatari, T.Konno, T.Kitamori, K.Ishihara
    • Journal Title

      ACS Appl Mater Interfaces

      Volume: 7 Issue: 41 Pages: 23089-23097

    • DOI

      10.1021/acsami.5b06796

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] An Integrated Glass Nanofluidic Device Enabling in situ Electrokinetic Probing of Water Confined in a Single Nanochannel under Pressure-Driven Flow Conditions2015

    • Author(s)
      Yan Xu, Baihui Xu
    • Journal Title

      Small

      Volume: 11 Issue: 46 Pages: 6165-6171

    • DOI

      10.1002/smll.201502125

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Regeneration of Glass Nanofluidic Chips through a Multiple-Step Sequential Thermochemical Decomposition Process at High Temperatures2015

    • Author(s)
      Yan Xu, Qian Wu, Yuji Shimatani, Koji Yamaguchi
    • Journal Title

      Lab on a Chip

      Volume: 15 Issue: 19 Pages: 3856-3861

    • DOI

      10.1039/c5lc00604j

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Flexible and In-Situ Fabrication of Nanochannels with High Aspect Ratios and Nanopillar Arrays in Fused Silica Substrates Utilizing Focused Ion Beam2015

    • Author(s)
      Yan Xu, Nobuhiro Matsumoto
    • Journal Title

      RSC Advances

      Volume: 5 Issue: 62 Pages: 50638-50643

    • DOI

      10.1039/c5ra06306j

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Site-Specific Nanopatterning of Functional Metallic and Molecular Arbitrary Features in Nanofluidic Channels2015

    • Author(s)
      Yan Xu, Nobuhiro Matsumoto, Qian Wu, Yuji Shimatani, Hiroaki Kawata
    • Journal Title

      Lab on a Chip

      Volume: 15 Issue: 9 Pages: 1989-1993

    • DOI

      10.1039/c5lc00190k

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Formation of submicron particle arrays by utilizing nanowells in nanochannels2015

    • Author(s)
      Misato Shinomiya, Yan Xu
    • Journal Title

      Proceedings of Micro Total Analysis Systems

      Volume: - Pages: 1556-1558

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Determination of Cattle Foot-and-Mouth Disease Virus by Micro-ELISA Method2014

    • Author(s)
      Yiyang Dong, Yan Xu, Zaixin Liu, Yuanfang Fu, Toshinori Ohashi, Kazuma Mawatari, Takehiko Kitamori
    • Journal Title

      Analytical Sciences

      Volume: 30 Issue: 3 Pages: 359-363

    • DOI

      10.2116/analsci.30.359

    • NAID

      130004827418

    • ISSN
      0910-6340, 1348-2246
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Aptamer and its potential applications for food safety2014

    • Author(s)
      Yiyang Dong, Yan Xu, Wei Yong, Xiaogang Chu, Daning Wang
    • Journal Title

      Critical Reviews in Food Science and Nutrition

      Volume: 54 Issue: 12 Pages: 1548-156

    • DOI

      10.1080/10408398.2011.642905

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Presentation] 超微量流体を制御するNano-in-Nano集積化技術を駆使したナノ化学システム2017

    • Author(s)
      許岩
    • Organizer
      JSTオープンイノベーションフェアWEST2017 ~関西発 大学技術シーズ見本市~
    • Place of Presentation
      ブリーゼプラザ803号室, 大阪, 日本
    • Year and Date
      2017-02-22
    • Related Report
      2016 Annual Research Report
  • [Presentation] Nanofluidic Nanoarrays for Single-Cell Omics with Single-Molecule Sensitivity2016

    • Author(s)
      Xu Y.
    • Organizer
      The 10th Shenzhen Symposium on Biomedical and Health Engineering
    • Place of Presentation
      深セン先院, Shenzhen, China
    • Year and Date
      2016-12-23
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Bridging World-to-Nanofluidics Interfaces through Nano-in-Nano Integration Technology.2016

    • Author(s)
      Xu Y.
    • Organizer
      27th 2016 International Symposium on Micro-NanoMechatronics and Human Science (From Micro & Nano Scale Systems to Robotics & Mechatronics Systems)
    • Place of Presentation
      Noyori memorial Conference Hall, Nagoya University, Nagoya, Japan
    • Year and Date
      2016-11-28
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] シラン化 MPCモノマーの蛋白質吸着抑制効果の評価とナノ流体デバイスへの応用2016

    • Author(s)
      藤本学都、呉倩、許岩
    • Organizer
      日本バイオマテリアル学会シンポジウム2016
    • Place of Presentation
      福岡国際会議場, 福岡, 日本
    • Year and Date
      2016-11-21
    • Related Report
      2016 Annual Research Report
  • [Presentation] Antifouling surface Modification of Nanochannels Using a Silanized Phospholipid Monomer2016

    • Author(s)
      Xu Y. , Wu Q.
    • Organizer
      The 20th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2016)
    • Place of Presentation
      Convetion Center Dublin, Dublin, Ireland
    • Year and Date
      2016-10-09
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Nano-in-Nano集積化技術を利用したナノチャネルin-situ温度測定2016

    • Author(s)
      中嶋太一、許岩
    • Organizer
      日本分析化学会第65年会
    • Place of Presentation
      北海道大学工学部, 札幌, 日本
    • Year and Date
      2016-09-14
    • Related Report
      2016 Annual Research Report
  • [Presentation] In-situ Measurement of Temperature in Nanochannels Utilizing Nano-in-nano Integration Technology2016

    • Author(s)
      Nakajima T., Xu Y.
    • Organizer
      RSC Tokyo International Conference 2016
    • Place of Presentation
      Makuhari-Messe, Chiba, Japan
    • Year and Date
      2016-09-08
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Nano-in-Nano 集積化によるエネルギー変換デバイス創製への挑戦2016

    • Author(s)
      中嶋太一、許岩
    • Organizer
      化学とマイクロ・ナノシステム学会第34回研究会
    • Place of Presentation
      幕張メッセ コンベンションホール, 千葉, 日本
    • Year and Date
      2016-09-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] Active Regulation of Femtoliter-scale Fluids in Nanochannel by Nano-in-Nano Technology2016

    • Author(s)
      Xu Y.
    • Organizer
      The 6th International Multidisciplinary Conference on Optofluidics
    • Place of Presentation
      Park Plaza Beijing Science Park, Beijing, China
    • Year and Date
      2016-07-24
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Single Molecule Detection Using A Nanofluidic Nanoarray For Single Cell Omics2016

    • Author(s)
      Xu Y
    • Organizer
      8th International Symposium on microchemisry and microsystems (ISMM2016)
    • Place of Presentation
      University of Hong Kong, Hong kong, China
    • Year and Date
      2016-05-31
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 「Nano-in-Nano」超高精度ナノ集積化技術を駆使したデジタル化ナノチャネル分析2016

    • Author(s)
      許岩
    • Organizer
      第76回分析化学討論会
    • Place of Presentation
      岐阜薬科大学, 岐阜, 日本
    • Year and Date
      2016-05-27
    • Related Report
      2016 Annual Research Report
  • [Presentation] Fabrication of smartbiointerfaces in nanochannels with a thiolatedtemperature-responsivepolymer.2016

    • Author(s)
      Xu Y.
    • Organizer
      10th World Biomaterials Congress(WBC2016)
    • Place of Presentation
      Montreal Convention Center, Montreal, Canada
    • Year and Date
      2016-05-17
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 超高精度ナノ集積化技術(Nano-in-nano技術)を利用したナノ流路in-situ温度測定2016

    • Author(s)
      中嶋太一、許岩
    • Organizer
      化学とマイクロ・ナノシステム学会第33回研究会
    • Place of Presentation
      東京大学, 東京, 日本
    • Year and Date
      2016-04-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Beyond the Bare Nanochannels: Exploring the Possibilities of Nanofluidics through Nano-in-Nano Integration2016

    • Author(s)
      Xu Y.
    • Organizer
      State Key Laboratory of Analog and Mixed-Signal VLSI (AMSV) Distinguished Lecture
    • Place of Presentation
      Macau university, Macau, China
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Femtoliter-Scale Nanofluidic Analysis Enabled by Nano-in-Nano Integration Technology.2016

    • Author(s)
      Xu Y.
    • Organizer
      3rd Asian Symposium for Analytical Sciences (3rd ASAS)
    • Place of Presentation
      Hokkaido University Faculty of Engineering Academic Lounge 3
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Nano-in-Nano 集積化技術を駆使したナノ化学システムの開発2016

    • Author(s)
      許岩
    • Organizer
      化学工学会関西支部 第4回技術シーズフォーラム
    • Place of Presentation
      同志社大学室町キャンパス, 京都, 日本
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] ナノ流路を用いたナノ粒子のアレイ化2015

    • Author(s)
      島谷雄士、許岩
    • Organizer
      化学とマイクロ・ナノシステム学会第32回研究会
    • Place of Presentation
      福岡国際会議場, 福岡
    • Year and Date
      2015-11-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] ナノ流路における水のその場動電的プロービング2015

    • Author(s)
      中嶋太一、許柏卉、許岩
    • Organizer
      化学とマイクロ・ナノシステム学会第32回研究会
    • Place of Presentation
      福岡国際会議場, 福岡
    • Year and Date
      2015-11-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] デジタル化ナノチャネルによるリガンド-受容体反応の1分子検出2015

    • Author(s)
      藤本学都、許岩
    • Organizer
      化学とマイクロ・ナノシステム学会第32回研究会
    • Place of Presentation
      福岡国際会議場, 福岡
    • Year and Date
      2015-11-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] バイオセンサー応用を指向したフォトニック結晶導波路の設計・試作2015

    • Author(s)
      孫佳儀、許岩、末吉健志、久本秀明、遠藤達郎
    • Organizer
      化学とマイクロ・ナノシステム学会第32回研究会
    • Place of Presentation
      福岡国際会議場, 福岡
    • Year and Date
      2015-11-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] ナノ空間内タンパク質の非特異的吸着を抑制するためのMPCSiモノマーの合成と評価2015

    • Author(s)
      呉倩、許岩
    • Organizer
      日本バイオマテリアル学会
    • Place of Presentation
      京都テルサ, 京都
    • Year and Date
      2015-11-09
    • Related Report
      2015 Annual Research Report
  • [Presentation] Site-specific working inside nanofluidic channels: general methodology, critical techniques, and nanobio applications2015

    • Author(s)
      Yan Xu
    • Organizer
      The 2nd FZU-OPU Joint International Symposium on Photocatalysis, Phot-functional Materials and Nano-Science &. Technology
    • Place of Presentation
      福州大学, Fuzhou, China
    • Year and Date
      2015-11-06
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Nanobio interfaces innovation enabling nanofluidics: general methodology, critical techniques, and nanobio applications2015

    • Author(s)
      Yan Xu
    • Organizer
      Lecture Series for the 100th Anniversary of the Birth of Lu Jiaxi
    • Place of Presentation
      Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou, China
    • Year and Date
      2015-11-05
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Formation of Submicron Particle Arrays by Utilizing Nanowells in Nanochannels2015

    • Author(s)
      Yuji Shimatan, Yan Xu
    • Organizer
      The 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2015)
    • Place of Presentation
      Hwabaek International Convention Center(HICO), Gyeongju, KOREA
    • Year and Date
      2015-10-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] A Simple Regeneration Method for Glass Nanofluidic Chips by Utilizing a Thermochemical Decomposition Process2015

    • Author(s)
      Yuji Shimatan, Qian Wu, Koji Yamaguchi, Yan Xu
    • Organizer
      RSC Tokyo International Conference 2015
    • Place of Presentation
      幕張メッセ, Chiba, Japan
    • Year and Date
      2015-09-03
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Arraying of Nanoparticles in Nanochannels with Nanowells2015

    • Author(s)
      Yuji Shimatan, Yan Xu
    • Organizer
      7th International Symposium on Microchemistry and Microsystems (ISMM2015)
    • Place of Presentation
      京都大学桂キャンパス, kyoto, Japan
    • Year and Date
      2015-06-08
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] マイクロ化学チップのお話し--髪の毛ほどの太さの流路を使って化学をする-2015

    • Author(s)
      許岩
    • Organizer
      「未来の博士」育成ラボ・H27年度開講式
    • Place of Presentation
      大阪府立大学, 堺, 大阪
    • Year and Date
      2015-04-18
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] マイクロ・ナノ化学チップ技術の最前線2015

    • Author(s)
      許 岩
    • Organizer
      第12回NanoSquareカフェ
    • Place of Presentation
      大阪府立大学 I-site なんば(大阪)
    • Year and Date
      2015-03-07
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Functionalization of Nanofluidic Channels and its Application to NanoBio Sciences2015

    • Author(s)
      Yan Xu
    • Organizer
      Summit of Biomedical and Health Engineering (2015) of SIAT, CAS
    • Place of Presentation
      Shenzhen(China)
    • Year and Date
      2015-01-05
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] A Phospholipid Polymer Hydrogel for On-Chip Cell-Based Applications in Flexible Working Conditions2014

    • Author(s)
      Yan Xu, Tomohiro Konno, Kazuhiko Ishihara, Takehiko Kitamori
    • Organizer
      24th MRS-J
    • Place of Presentation
      Yokohama Kaikou Memorial Museum, Naka-ku, Yokohama, Kanagawa (Japan)
    • Year and Date
      2014-12-10 – 2014-12-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] Design, synthesis and characterization of a thiolated temperature-responsive polymer for smart nanofluidic control2014

    • Author(s)
      Misato Shinomiya, Atsushi Harada, Yan Xu
    • Organizer
      The 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2014)
    • Place of Presentation
      San Antonio, Texas(USA)
    • Year and Date
      2014-10-26 – 2014-10-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] Fabrication of Nanofluidic Chips with Nanoelectrodes Embedded into Nanochannels for Electrokinetic Measurements of Nanospace2014

    • Author(s)
      Yan Xu, Baihui Xu, Hiroaki Kawata
    • Organizer
      The 6th International Symposium on Microchemistry and Microsystems (ISMM2014)
    • Place of Presentation
      Singapore (Singapore)
    • Year and Date
      2014-07-30 – 2014-08-01
    • Related Report
      2014 Annual Research Report
  • [Presentation] マイクロ・ナノ界面の創製によるマイクロ・ナノ化学バイオシステムの研究2014

    • Author(s)
      許 岩
    • Organizer
      化学とマイクロ・ナノシステム学会第29回研究会
    • Place of Presentation
      日本女子大学目白キャンパス 桜楓2号館(東京)
    • Year and Date
      2014-05-22 – 2014-05-23
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] ナノ流路内1分子検出信号を局所化する為のナノウェルアレイの作制2014

    • Author(s)
      島谷雄士、許岩
    • Organizer
      化学とマイクロ・ナノシステム学会第29回研究会
    • Place of Presentation
      日本女子大学目白キャンパス 桜楓2号館(東京)
    • Year and Date
      2014-05-22 – 2014-05-23
    • Related Report
      2014 Annual Research Report
  • [Remarks] 大阪府立大学・許研究室HP

    • URL

      http://www.chemeng.osakafu-u.ac.jp/group8/index.html

    • Related Report
      2015 Annual Research Report
  • [Remarks] 許研究室HP

    • URL

      http://www.nanosq.21c.osakafu-u.ac.jp/ttsl_lab/y_xu/index.html

    • Related Report
      2014 Annual Research Report
  • [Patent(Industrial Property Rights)] 流路構造体および流路構造体の製造方法2014

    • Inventor(s)
      許岩
    • Industrial Property Rights Holder
      許岩
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2014-101461
    • Filing Date
      2014-05-15
    • Related Report
      2014 Annual Research Report

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Published: 2014-04-04   Modified: 2018-03-22  

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