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Development of fluorescent probes for detection of histone deacetylase activity

Research Project

Project/Area Number 26750371
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Chemical biology
Research InstitutionOsaka University

Principal Investigator

MINOSHIMA Masafumi  大阪大学, 工学研究科, 助教 (20600844)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords蛍光プローブ / ヒストン脱アセチル化酵素 / DNA / エピゲノム創薬 / 化学プローブ
Outline of Final Research Achievements

In this study, fluorescent probes were developed for detecting histone deacetylase (HDAC) activity involved in epigenetic gene expression. We designed and synthesized peptide conjugates between nuclear staining dye and HDAC substrates based on the control of DNA interaction upon deacetylation. Reaction of the probes with HDAC in the presence of DNA resulted in fluorescence enhancement in concomitant with the increase of DNA binding affinity. Our method demonstrated rapid detection of HDAC activity with a one-pot procedure.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (15 results)

All 2017 2016 2015 2014

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Acknowledgement Compliant: 2 results) Presentation (12 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] Photostable and Photoswitching Fluorescent Dyes for Super-resolution Imaging2017

    • Author(s)
      M. Minoshima, K. Kikuchi
    • Journal Title

      Journal of Biological Inorganic Chemistry

      Volume: - Issue: 5 Pages: 1-14

    • DOI

      10.1007/s00775-016-1435-y

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Chemical Tools for Probing Histone Deacetylase (HDAC) Activity2015

    • Author(s)
      M. Minoshima, and K. Kikuchi
    • Journal Title

      Analytical Sciences

      Volume: 31 Issue: 4 Pages: 287-292

    • DOI

      10.2116/analsci.31.287

    • NAID

      130005061530

    • ISSN
      0910-6340, 1348-2246
    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Development of a Fluorogenic Probe Based on a DNA Staining Dye for Continuous Monitoring of the Histone Deacetylase Reaction2014

    • Author(s)
      M. Minoshima, T. Matsumoto, and K. Kikuchi
    • Journal Title

      Anal. Chem.

      Volume: 86 Issue: 15 Pages: 7925-7930

    • DOI

      10.1021/ac501881s

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] 生体内破骨細胞活性を検出するpH感受性赤色蛍光プローブの開発2017

    • Author(s)
      大森雄太、前田拓樹、蓑島維文、菊地和也
    • Organizer
      日本化学会第97春季年会
    • Place of Presentation
      慶應義塾大学(神奈川県・横浜市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Annual Research Report
  • [Presentation] 蛍光プローブとDNAを用いたHDAC活性検出法の開発2016

    • Author(s)
      立松結花、蓑島維文、菊地和也
    • Organizer
      第25回日本バイオイメージング学会学術集会
    • Place of Presentation
      名古屋市立大学(愛知県・名古屋市)
    • Year and Date
      2016-09-05
    • Related Report
      2016 Annual Research Report
  • [Presentation] Development of DNA-binding fluorescent probe for detection of histone deacetylase activity2016

    • Author(s)
      Masafumi Minoshima, Yuka Tatematsu, Tetsuaki Matsumoto, Kazuya Kikuchi
    • Organizer
      EMBO Conference 2016: Chemical Biology
    • Place of Presentation
      Heiderberg, Germany
    • Year and Date
      2016-08-31
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] DNA結合性蛍光プローブによるHDAC活性検出手法の開発2016

    • Author(s)
      蓑島維文、立松結花、松本哲明、菊地和也
    • Organizer
      日本ケミカルバイオロジー学会第11回年会
    • Place of Presentation
      京都テルサ(京都府・京都市)
    • Year and Date
      2016-06-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] 蛍光プローブとDNAを用いたHDAC活性検出法の開発2016

    • Author(s)
      立松結花、蓑島維文、菊地和也
    • Organizer
      日本化学会第96春季年会
    • Place of Presentation
      同志社大学(京都府・京田辺市)
    • Year and Date
      2016-03-24
    • Related Report
      2015 Research-status Report
  • [Presentation] Development of Detection System for Histone Deacetylase Activity Using Fluorescent Probe and DNA2015

    • Author(s)
      M. Minoshima, T. Matsumoto, K. Kikuchi
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu, HI, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 蛍光プローブとDNAを用いたヒストン脱アセチル化酵素の検出2015

    • Author(s)
      蓑島維文、松本哲明、立松結花、菊地和也
    • Organizer
      第9回バイオ関連化学合同シンポジウム
    • Place of Presentation
      熊本大学(熊本県・熊本市)
    • Year and Date
      2015-09-10
    • Related Report
      2015 Research-status Report
  • [Presentation] DNA結合色素を使ったエピジェネティック酵素活性検出法の開発2015

    • Author(s)
      蓑島維文・松本哲明・菊地和也
    • Organizer
      日本化学会第95春季年会
    • Place of Presentation
      日本大学船橋キャンパス・薬学部、千葉
    • Year and Date
      2015-03-26 – 2015-03-29
    • Related Report
      2014 Research-status Report
  • [Presentation] 核染色色素を基にした蛍光プローブでヒストン脱アセチル化酵素活性を検出する2015

    • Author(s)
      蓑島維文・松本哲明・菊地和也
    • Organizer
      第17回 生命化学研究会
    • Place of Presentation
      三翠園、高知
    • Year and Date
      2015-01-08 – 2015-01-10
    • Related Report
      2014 Research-status Report
  • [Presentation] Fluorogenic detection of deacetylase enzymes using DNA binding dye2014

    • Author(s)
      Masafumi Minoshima, Tetsuaki Matsumoto, Kazuya Kikuchi
    • Organizer
      41th International Symposium of Nucleic Acids Chemistry
    • Place of Presentation
      北九州国際会議場、福岡
    • Year and Date
      2014-11-05 – 2014-11-07
    • Related Report
      2014 Research-status Report
  • [Presentation] DNA結合色素を基にしたヒストン脱アセチル化酵素活性検出法の開発2014

    • Author(s)
      松本哲明・蓑島維文・菊地和也
    • Organizer
      日本ケミカルバイオロジー学会 第9回年会
    • Place of Presentation
      大阪大学豊中キャンパス、大阪
    • Year and Date
      2014-06-11 – 2014-06-13
    • Related Report
      2014 Research-status Report
  • [Presentation] Development of Fluorogenic System for Detection of Histone Deacetylase Activity Using DNA Binding Dye2014

    • Author(s)
      Masafumi Minoshima, Tetsuaki Matsumoto, Kazuya Kikuchi
    • Organizer
      Gordon Research Conference, Bioorganic Chemistry 2014
    • Place of Presentation
      Procter Academy, NH, USA
    • Year and Date
      2014-06-08 – 2014-06-13
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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