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Quantitative proteomics of cellular protein-thiol redox homeostasis

Research Project

Project/Area Number 26750376
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Chemical biology
Research InstitutionNational Institute of Advanced Industrial Science and Technology

Principal Investigator

Araki Kazutaka  国立研究開発法人産業技術総合研究所, 創薬分子プロファイリング研究センター, 研究員 (60514255)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords質量分析測定 / タンパク質 / 酸化還元 / プロテオミクス / 翻訳語修飾 / 質量分析 / 翻訳後修飾
Outline of Final Research Achievements

The protein cysteine residue is one of the amino acids most susceptible to oxidative modifications, frequently caused by oxidative stress. Several applications have enabled cysteine-targeted proteomics analysis with simultaneous detection and quantitation, like ICAT method. In this study, we employed a quantitative approach using a set of iodoacetyl-based cysteine reactive isobaric tags (iodoTMT) and evaluated the transient cellular oxidation ratio of free and reversibly modified cysteine thiols under DTT and hydrogen peroxide (H2O2) treatments. DTT treatment (1 mM for 5 min) reduced most cysteine thiols, irrespective of their cellular localizations. Modest H2O2 treatment (50 μM for 5 min) did not cause global oxidations but, instead, had apparently reductive effects. Moreover, with H2O2, significant oxidative shifts were observed only in redox active proteins. Overall, we could succeed to yeild quantitative data, illustrating both H2O2- and reduction-mediated cellular responses.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (4 results)

All 2016 2015 Other

All Presentation (3 results) Remarks (1 results)

  • [Presentation] プロテオミクスによる細胞内システイン残基の酸化状態定量解析2016

    • Author(s)
      新木和孝
    • Organizer
      第15回 LS-BT合同研究発表会
    • Place of Presentation
      産業技術総合研究所つくばセンター(茨城県)
    • Year and Date
      2016-02-03
    • Related Report
      2015 Annual Research Report
  • [Presentation] プロテオミクスによる細胞内システイン残基の酸化状態定量解析2016

    • Author(s)
      新木和孝
    • Organizer
      つくば医工連携フォーラム2016
    • Place of Presentation
      産業技術総合研究所つくばセンター(茨城県)
    • Year and Date
      2016-01-22
    • Related Report
      2015 Annual Research Report
  • [Presentation] プロテオミクスによる細胞内システイン残基の酸化還元状態定量解析2015

    • Author(s)
      新木和孝
    • Organizer
      第38回日本分子生物学会年会、第88回日本生化学会大会 合同大会
    • Place of Presentation
      神戸ポートアイランド(兵庫県)
    • Year and Date
      2015-12-03
    • Related Report
      2015 Annual Research Report
  • [Remarks] 産総研創薬分子プロファイリング研究センター・個人サイト

    • URL

      http://www.molprof.jp/~araki/

    • Related Report
      2015 Annual Research Report

URL: 

Published: 2014-04-04   Modified: 2017-05-10  

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