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The pattern formations in hepatic lobule considering the effects of the cell polarity of hepatocytes in hepatic disease rat

Research Project

Project/Area Number 26800225
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biological physics/Chemical physics/Soft matter physics
Research InstitutionKyoto Prefectural University of Medicine

Principal Investigator

Shoji Hiroto  京都府立医科大学, 医学(系)研究科(研究院), 講師 (00378936)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Fiscal Year 2016: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2015: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords形態形成 / チューリングパターン
Outline of Final Research Achievements

Microstructures in the liver are primarily composed of hepatocyte, hepatic blood, and biliary vessels. Because each hepatocyte comes in contact with hepatic blood, and biliary vessels, these vessels and the hepatocyte cord form 3D periodic network patterns. We have elucidated the morphogenesis of 3D microstructures in liver using imaging data of diseased rat liver. Based on the confocal image of hepatocyte and blood vessels in diseased liver and the quantitative data of blood flow, we have performed an allometric analysis of 3D morphological changes in liver. We also discuss the physical effect to morphogenesis by using the fractal index of patterns of the blood vessel.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (23 results)

All 2017 2016 2015 2014

All Journal Article (5 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 3 results,  Acknowledgement Compliant: 3 results,  Open Access: 2 results) Presentation (17 results) (of which Int'l Joint Research: 7 results,  Invited: 2 results) Book (1 results)

  • [Journal Article] A Reaction-diffusion Algorithm for Segmentation of Confocal Laser Scanning Microscope Images2016

    • Author(s)
      Hiroto Shoji
    • Journal Title

      FORMA

      Volume: 31 Pages: 23-25

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] フラクタル解析から見るラット肝類洞、毛細胆管ネットワーク構造と疾患による形態変化2016

    • Author(s)
      昌子浩登、佐久間省吾、本谷秀堅、赤星径一、工藤篤
    • Journal Title

      京都大学数理解析研究所考究録

      Volume: 1994 Pages: 94-100

    • Related Report
      2016 Annual Research Report
    • Open Access / Acknowledgement Compliant
  • [Journal Article] Scaling law in free walking of mice in circular open fields of various diameters2016

    • Author(s)
      Hiroto Shoji
    • Journal Title

      Journal of Biological Physics

      Volume: 42 Issue: 2 Pages: 259-270

    • DOI

      10.1007/s10867-015-9406-z

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] 肝小葉内の類洞と毛細胆管の形態形成数理モデル2015

    • Author(s)
      昌子浩登
    • Journal Title

      京都大学数理解析学研究所研究集会講究録

      Volume: 1937 Pages: 112-119

    • Related Report
      2015 Research-status Report
    • Open Access
  • [Journal Article] Computer simulations of three-dimensional Turing patterns in the Lengyel-Epstein model2015

    • Author(s)
      (H. Shoji and T. Ohta
    • Journal Title

      Phys. Rev.

      Volume: E91 Issue: 3 Pages: 32913-32913

    • DOI

      10.1103/physreve.91.032913

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] Design analysis of Three dimensional periodic network patterns of the sinusoid and bile canaliculius in the hepatic lobule2017

    • Author(s)
      Hiroto Shoji
    • Organizer
      The third international symposium on the project multidisciplinary computational anatomy
    • Place of Presentation
      Nara
    • Year and Date
      2017-03-08
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] A Reaction-diffusion Algorithm for Segmentation of Liver Sinusoid in Rats Fed a High Fat and Cholesterol Diet and Their Evaluations2017

    • Author(s)
      Hiroto Shoji, Kohtaro Yamada
    • Organizer
      International Forum on Medical Imaging in Asia 2017
    • Place of Presentation
      tenbusu kaikan, okinawa, japan
    • Year and Date
      2017-01-26
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 肝小葉内ミクロ構造を用いた共焦点顕微鏡像のセグメンテーションへの反応拡散モデルを用いたアルゴリズム2016

    • Author(s)
      昌子浩登
    • Organizer
      第26回非線形反応と協同現象の研究会
    • Place of Presentation
      明治大学中野キャンパス
    • Year and Date
      2016-12-10
    • Related Report
      2016 Annual Research Report
  • [Presentation] 肝疾患における形態変形の解析,2016

    • Author(s)
      昌子浩登
    • Organizer
      京都大学数理解析学研究所研究集会
    • Place of Presentation
      京都大学数理解析学研究所
    • Year and Date
      2016-11-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] Physical Analysis of Branching Patterns of Sinusoidal Networks Hepatic lobule2016

    • Author(s)
      Hiroto Shoji
    • Organizer
      2016年日本数理生物学会
    • Place of Presentation
      九州大学元岡キャンパス
    • Year and Date
      2016-09-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] Computer simulations of three-dimensional Turing patterns in Lengyel-Epstein model2016

    • Author(s)
      Hiroto Shoji, Takao Ohta
    • Organizer
      International Conference: Patterns and Waves
    • Place of Presentation
      Sappro, Japan
    • Year and Date
      2016-08-01
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Three Dimensional Imaging of Diseased Rat Lung and Liver Using Ultrahigh Resolution Optical Coherence Tomography2016

    • Author(s)
      M. Nanbu, Y. Ando, H. Kawagoe, M. Yamanaka, M. Matsushima, K. Mori, T. Kawabe, H. Shoji and N. Nishizawa
    • Organizer
      5th Advanced Lasers and Photon Sources
    • Place of Presentation
      Yokohama, Japan
    • Year and Date
      2016-05-17
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Design analysis of 3D periodic networks of sinusoid and bile canaliculi in hepatic lobule2016

    • Author(s)
      Hiroto Shoji
    • Organizer
      The second international symposium on the project multidisciplinary computational anatomy
    • Place of Presentation
      Noyori conferencel hall, Nagoya University
    • Year and Date
      2016-02-11
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 肝小葉の類洞と毛細胆管ネットワーク形態形成 メカニズムの数理的理解に向けて2015

    • Author(s)
      昌子浩登
    • Organizer
      京都大学数理解析学研究所研究集会第12回生物数学の理論とその応用
    • Place of Presentation
      京都大学数理解析学研究所
    • Year and Date
      2015-11-24
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Walking durations in Free-walking in circular open fields of various diameters2015

    • Author(s)
      Hiroto Shoji
    • Organizer
      SWARM2015
    • Place of Presentation
      京都大学時計台ホール
    • Year and Date
      2015-10-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Toward Mathematical Understandings of 3D morphology of two types of vein in Hepatic lobule2015

    • Author(s)
      Hiroto Shoji
    • Organizer
      明治大学MIMS現象数理学拠点共同研究集会「自然、社会に現れる複雑現象の数理」
    • Place of Presentation
      明治大学中野キャンパス
    • Year and Date
      2015-10-05
    • Related Report
      2015 Research-status Report
  • [Presentation] Towards mathematical understandings of 3D morphology of two types of veins in hepatic lobule2015

    • Author(s)
      Hiroto Shoji
    • Organizer
      GTCJapan2015
    • Place of Presentation
      虎ノ門ヒルズフォーラム
    • Year and Date
      2015-09-18
    • Related Report
      2015 Research-status Report
  • [Presentation] 3D Network Patterns in Lobulus Hepatis and their Characterizations by Physical Analysis2015

    • Author(s)
      Hiroto Shoji
    • Organizer
      第5回日中韓数理生物コロキュウム&第25回日本数理生物学会
    • Place of Presentation
      同志社大学今出川キャンパス
    • Year and Date
      2015-08-26
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 肝小葉内類洞と毛細胆管の3次元ネットワーク数理デザイン解析2015

    • Author(s)
      昌子浩登
    • Organizer
      第一回多元計算解剖学サマーワークショップ
    • Place of Presentation
      コスモスクエア国際交流センター
    • Year and Date
      2015-08-24
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Mathematical model for two types of vains in hepatic lobular2015

    • Author(s)
      昌子浩登
    • Organizer
      定量生物学の会第七回年会
    • Place of Presentation
      九州大学筑紫キャンパス 筑紫ホール・C-cube
    • Year and Date
      2015-01-11 – 2015-01-12
    • Related Report
      2014 Research-status Report
  • [Presentation] 肝小葉内の類洞と毛細胆管の形態形成数理モデル2014

    • Author(s)
      昌子浩登
    • Organizer
      京都大学数理科学研究所研究集会、第11回生物数学の理論とその応用
    • Place of Presentation
      京都大学数理科学研究所420号室
    • Year and Date
      2014-09-16
    • Related Report
      2014 Research-status Report
  • [Presentation] Possible three-dimensional Turing patterns in Lengyel-Epstein model utilizing CUDA2014

    • Author(s)
      Hiroto Shoji
    • Organizer
      GPU Technology Conference, Japan 2014
    • Place of Presentation
      東京ミッドタウンホール
    • Year and Date
      2014-07-16
    • Related Report
      2014 Research-status Report
  • [Book] マレー数理生物学 応用編-パターン形成の数理とバイオメディカルへの応用2016

    • Author(s)
      監修 三村昌泰、瀬野裕美、昌子浩登 他17人
    • Total Pages
      512
    • Publisher
      丸善出版
    • Related Report
      2016 Annual Research Report

URL: 

Published: 2014-04-04   Modified: 2018-03-22  

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