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Quantitatve evaluation of amino acid polymerization on oxide minerals

Research Project

Project/Area Number 26800276
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Geochemistry/Cosmochemistry
Research InstitutionTokyo Institute of Technology

Principal Investigator

Kitadai Norio  東京工業大学, 地球生命研究所, WPI研究員 (80625723)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2014: ¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Keywords生命の起源 / アストロバイオロジー / 化学進化 / ペプチド / アミノ酸 / 生命の化学進化
Outline of Final Research Achievements

In this study, I have examined the synthetic and polymerization behaviors of amino acids under various conditions. I determined a complete set of thermodynamic parameters for the 20 protein amino acids, three short peptides, and four non-protein amino acids. Calculations using the dataset suggested that Hadean alkaline hydrothermal settings, where steep pH and temperature gradients may have existed between cool, slightly acidic Hadean ocean water and hot, alkaline hydrothermal fluids at the vent-ocean interface, is energetically the most suitable environment for the synthesis and polymerization of protein-amino acids. As an experimental approach, I have examined the polymerization of glycine on nine oxide minerals. Polymerization activation was inferred to have arisen from deprotonation of the NH3+ group of adsorbed Gly to the nucleophilic NH2 group, and from withdrawal of electron density from the carboxyl carbon to the surface metal ions.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (21 results)

All 2016 2015 2014 2013

All Journal Article (10 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 10 results,  Acknowledgement Compliant: 3 results,  Open Access: 1 results) Presentation (11 results) (of which Int'l Joint Research: 2 results,  Invited: 3 results)

  • [Journal Article] Dissolved divalent metal and pH effects on amino acid polymerization: A thermodynamic evaluation2016

    • Author(s)
      Norio Kitadai
    • Journal Title

      Origins of Life and Evolution of Biospheres

      Volume: 印刷中

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Predicting thermodynamic behaviors of non-protein amino acids as a function of temperature and pH,2016

    • Author(s)
      Kitadai, N.
    • Journal Title

      Origins of Life and Evolution of Biospheres

      Volume: 46 Issue: 1 Pages: 3-18

    • DOI

      10.1007/s11084-015-9457-y

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Energetics of amino acid synthesis in alkaline hydrothermal environments2015

    • Author(s)
      Kitadai, N.
    • Journal Title

      Origins of Life and Evolution of Biospheres

      Volume: 45 Issue: 4 Pages: 377-409

    • DOI

      10.1007/s11084-015-9428-3

    • Related Report
      2015 Annual Research Report 2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] A principled approach to the origin problem2015

    • Author(s)
      Aono, M., Kitadai, N., Oono, Y
    • Journal Title

      Origins of Life and Evolution of Biospheres

      Volume: 45 Issue: 3 Pages: 327-338

    • DOI

      10.1007/s11084-015-9444-3

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Polymerization of building blocks of life on Europa and other icy moons2015

    • Author(s)
      Kimura, J., Kitadai, N.
    • Journal Title

      Astrobiology

      Volume: 15 Issue: 6 Pages: 430-441

    • DOI

      10.1089/ast.2015.1306

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Polymerization of building blocks of life on Europa and other icy moons2015

    • Author(s)
      Kimura J. and Kitadai N.
    • Journal Title

      Astrobiology

      Volume: 未定

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] A principled approach to the origin problem2015

    • Author(s)
      Aono M., Kitadai, N., Oono, Y.
    • Journal Title

      Origins of Life and Evolution of Biospheres

      Volume: 未定

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Thermodynamic prediction of glycine polymerization as a function of temperature and pH consistent with experimentally obtained results2014

    • Author(s)
      Kitadai, N.
    • Journal Title

      Journal of Molecular Evolution

      Volume: 78 Issue: 3-4 Pages: 171-187

    • DOI

      10.1007/s00239-014-9616-1

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Effect of ions on the OH stretching band of water as revealed by ATR-IR spectroscopy2014

    • Author(s)
      Kitadai N. Sawai T. Tonoue R. Nakashima S. Katsura M. and Fukushi K.
    • Journal Title

      Journal of Solution Chemistry

      Volume: 43 Issue: 6 Pages: 1055-1077

    • DOI

      10.1007/s10953-014-0193-0

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Distribution and mineralogy of radioactive Cs in reservoir sediment contaminated by the Fukushima nuclear accident2013

    • Author(s)
      Aoi Y. Fukushi K. Itono T. Kitadai N. Kashiwaya K. Yamada H. Hatta T. and Manpuku Y.
    • Journal Title

      Journal of Mineralogical and Petrological Sciences

      Volume: 109 Issue: 1 Pages: 23-27

    • DOI

      10.2465/jmps.130620c

    • NAID

      130003383598

    • ISSN
      1345-6296, 1349-3825
    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] Electrochemistry and the origin of life2016

    • Author(s)
      Norio Kitadai
    • Organizer
      Workshop without walls: Upstairs Downstairs
    • Place of Presentation
      Arizona State University, Arizona, USA
    • Year and Date
      2016-02-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Electrochemically-driven carbon fixation2015

    • Author(s)
      Kitadai N., Hongo Y., Li Y., Yamaguchi A., Nakamura R., Yamamoto M., Takai K
    • Organizer
      The 8th Astrobiology Workshop
    • Place of Presentation
      ELSI, Tokyo Tech., Tokyo
    • Year and Date
      2015-11-27
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] アルカリ熱水噴気孔条件における硫化鉱物への有機酸の吸着2015

    • Author(s)
      西井明梨,北台紀夫,時盛ひとみ,黒川顕
    • Organizer
      2015年度 日本地球化学会年会
    • Place of Presentation
      横浜国立大学,神奈川県
    • Year and Date
      2015-09-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] エネルギーから探る生命の起源2015

    • Author(s)
      北台紀夫
    • Organizer
      生命の起源と宇宙の生命
    • Place of Presentation
      朝日カルチャーセンター 横浜教室,神奈川県
    • Year and Date
      2015-08-01
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] グリシン重合化に及ぼす鉱物種の影響2014

    • Author(s)
      大西浩之,北台紀夫,福士圭介
    • Organizer
      日本地球化学会第61回年会
    • Place of Presentation
      富山
    • Year and Date
      2014-09-16 – 2014-09-18
    • Related Report
      2014 Research-status Report
  • [Presentation] Polymerization of building blocks of life on Europa and other icy moons2014

    • Author(s)
      Jun Kimura and Norio Kitadai
    • Organizer
      European Planetary Science Congress (EPSC)
    • Place of Presentation
      Cascais, Portugal
    • Year and Date
      2014-09-07 – 2014-09-12
    • Related Report
      2014 Research-status Report
  • [Presentation] Proto-Metabolism ~代謝の起源~2014

    • Author(s)
      北台紀夫
    • Organizer
      生命の起源および進化学会 夏の学校
    • Place of Presentation
      東京
    • Year and Date
      2014-08-29 – 2014-08-30
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 代謝の起源2014

    • Author(s)
      北台紀夫
    • Organizer
      日本進化学会第16回大阪大会
    • Place of Presentation
      大阪
    • Year and Date
      2014-08-21 – 2014-08-24
    • Related Report
      2014 Research-status Report
  • [Presentation] Why life uses only α-amino acids as building blocks of proteins? A thermodynamic evaluation2014

    • Author(s)
      Kitadai, N.
    • Organizer
      Origins 2014
    • Place of Presentation
      Nara, Japan
    • Year and Date
      2014-07-06 – 2014-07-11
    • Related Report
      2014 Research-status Report
  • [Presentation] Polymerization of building blocks of life on Europa and other icy moons2014

    • Author(s)
      Jun Kimura and Norio Kitadai
    • Organizer
      Origins 2014
    • Place of Presentation
      Nara, Japan
    • Year and Date
      2014-07-06 – 2014-07-11
    • Related Report
      2014 Research-status Report
  • [Presentation] グリシン重合化に及ぼす鉱物種の影響2014

    • Author(s)
      大西浩之,北台紀夫,福士圭介
    • Organizer
      地球惑星科学連合2014年大会
    • Place of Presentation
      神奈川
    • Year and Date
      2014-04-28 – 2014-05-02
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2017-05-10  

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