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Translating human genetics into mouse with genome editing

Research Project

Project/Area Number 26830131
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Medical genome science
Research InstitutionTokyo Medical and Dental University

Principal Investigator

Aida Tomomi  東京医科歯科大学, 難治疾患研究所, 准教授 (50540481)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywordsノックインマウス / CRISPR / TALEN / ゲノム編集 / 疾患ゲノム / レアバリアント / 疾患モデル / ノックイン / マウス / 変異 / バリアント / CRISPR/Cas / 緑内障
Outline of Final Research Achievements

Recent advances in next generation sequencing technologies have revealed the landscape of human genetic diversity, which is comprised of millions of rare variants associated with health and disease. One possible approach to address the biological function of rare variants, as well as determining whether they are causal for the human phenotype of interest, is the use of precisely modified knockin mouse models carrying such human rare variants. We developed highly efficient, ultra-rapid, and cost-effective genome editing technologies for knockin mouse production. We generated a series of knockin mice mice carrying rare variants discovered from glaucoma patients. We found the pathogenic mechanism of these rare variant to glaucoma-like abnormalities in mice. Our results provide an useful approach to examining in vivo functional significance of rare variants.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (23 results)

All 2016 2015 2014 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (15 results) (of which Int'l Joint Research: 3 results,  Invited: 6 results) Book (2 results) Remarks (4 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Cloning-free CRISPR/Cas system facilitates functional cassette knockin in mice2015

    • Author(s)
      Aida T, Chiyo K, Usami T, Ishikubo H, Imahashi R, Wada Y, Tanaka K, Sakuma T, Yamamoto T, Tanaka K
    • Journal Title

      Genome Biol

      Volume: 16 Issue: 1 Pages: 87-87

    • DOI

      10.1186/s13059-015-0653-x

    • Related Report
      2015 Annual Research Report 2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Gene cassette knock-in in mice with cloning-free CRISPR/Cas system2016

    • Author(s)
      Aida T
    • Organizer
      13th Transgenic Technology Meeting
    • Place of Presentation
      プラハ、チェコ
    • Year and Date
      2016-03-23
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Genome editing in mice with cloning-free CRISPR/Cas system2015

    • Author(s)
      Aida T, Sakuma T, Yamamoto T, Tanaka K
    • Organizer
      Transposon and Genome Engineering 2015
    • Place of Presentation
      奈良春日野国際フォーラム甍(奈良市、奈良)
    • Year and Date
      2015-11-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cloning-free CRISPR/Cas system facilitates functional cassette knock-in in mice2015

    • Author(s)
      Aida T, Sakuma T, Yamamoto T, Tanaka K
    • Organizer
      Cold Spring Harbor Laboratory Meeting - Genome Engineering: The CRISPR/Cas Revolution
    • Place of Presentation
      ニューヨーク、アメリカ
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Cloning-free genome editing in mice.2015

    • Author(s)
      Tomomi Aida
    • Organizer
      第5回新潟大学脳研究所共同研究拠点国際シンポジウム
    • Place of Presentation
      新潟大学
    • Year and Date
      2015-03-05 – 2015-03-06
    • Related Report
      2014 Research-status Report
  • [Presentation] CRISPR/Cas mediated highly efficient generation of knockin mice carrying a gene cassette.2015

    • Author(s)
      Tomomi Aida
    • Organizer
      Keystone Symposia - Precision Genome Engineering and Synthetic Biology
    • Place of Presentation
      Montana, USA
    • Year and Date
      2015-01-11 – 2015-01-16
    • Related Report
      2014 Research-status Report
  • [Presentation] 機能カセットノックインマウスのためのCRISPR/Casを用いたin vivoゲノム編集2014

    • Author(s)
      相田知海
    • Organizer
      分子生物学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Research-status Report
  • [Presentation] グルタミン酸トランスポーターGLASTのヒトレアバリアントは網膜神経節細胞の脆弱性にin vivoで寄与する2014

    • Author(s)
      今橋里沙
    • Organizer
      分子生物学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Research-status Report
  • [Presentation] クローニングフリーゲノム編集による簡便・高効率の疾患モデルマウス作製2014

    • Author(s)
      相田知海
    • Organizer
      独)科学技術振興機構 研究開発戦略センター  「ゲノム編集研究開発戦略」に関する俯瞰ワークショップ
    • Place of Presentation
      JST東京別館
    • Year and Date
      2014-11-01
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] グルタミン酸トランスポーターと精神神経疾患.2014

    • Author(s)
      相田知海
    • Organizer
      生理学研究所研究会 グリア細胞機能から迫る脳機能解明
    • Place of Presentation
      生理学研究所
    • Year and Date
      2014-10-23 – 2014-10-24
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] CRISPR/Casによるノックインマウス作製の効率化2014

    • Author(s)
      相田知海
    • Organizer
      第4回ゲノム編集研究会
    • Place of Presentation
      広島国際会議場
    • Year and Date
      2014-10-06 – 2014-10-07
    • Related Report
      2014 Research-status Report
  • [Presentation] Platinum TALENによる高速・高効率なノックインマウス作製とヒトゲノム多様性の個体レベルでの機能解釈2014

    • Author(s)
      今橋里沙
    • Organizer
      第4回ゲノム編集研究会
    • Place of Presentation
      広島国際会議場
    • Year and Date
      2014-10-06 – 2014-10-07
    • Related Report
      2014 Research-status Report
  • [Presentation] グルタミン酸トランスポーターと精神神経疾患.2014

    • Author(s)
      相田知海
    • Organizer
      青山学院大学私立大学戦略的研究基盤形成プロジェクトワークショップ
    • Place of Presentation
      青山学院大学
    • Year and Date
      2014-10-04
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Rapid and highly efficient in vivo genome editing for knockin mouse: from human rare variants to gene cassettes2014

    • Author(s)
      Imahashi R
    • Organizer
      日本神経科学学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-09-11 – 2014-09-13
    • Related Report
      2014 Research-status Report
  • [Presentation] 高速・高効率in vivoゲノム編集によるマウス遺伝子改変2014

    • Author(s)
      相田知海
    • Organizer
      生理学研究所研究会 シナプス機能の普遍性と多様性
    • Place of Presentation
      生理学研究所
    • Year and Date
      2014-06-05 – 2014-06-06
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] In vivo genome editing for knockin mice production2014

    • Author(s)
      Tomomi Aida
    • Organizer
      Therapeutics Discovery Symposia USA
    • Place of Presentation
      Boston, USA
    • Year and Date
      2014-05-05 – 2014-05-06
    • Related Report
      2014 Research-status Report
    • Invited
  • [Book] CRISPR/Casでマウスゲノムを自在に操る、生化学2016

    • Author(s)
      相田 知海,田中 光一
    • Total Pages
      279
    • Publisher
      日本生化学学会
    • Related Report
      2015 Annual Research Report
  • [Book] Genome editing in mice using TALENs. Targeted Genome Editing Using Site-specific Nucleases: ZFNs, TALENs, and the CRISPR/Cas9 System2014

    • Author(s)
      Aida T
    • Total Pages
      205
    • Publisher
      Springer Publishing Company
    • Related Report
      2014 Research-status Report
  • [Remarks] 東京医科歯科大学 難治疾患研究所 分子神経科学分野

    • URL

      http://www.tmd.ac.jp/mri/aud/index.html

    • Related Report
      2015 Annual Research Report
  • [Remarks] 高効率を実現した遺伝子改変技術の開発

    • URL

      http://www.tmd.ac.jp/press-release/20150429/index.html

    • Related Report
      2015 Annual Research Report
  • [Remarks] 研究室ホームページ

    • URL

      http://www.tmd.ac.jp/mri/aud/index.html

    • Related Report
      2014 Research-status Report
  • [Remarks] 東京医科歯科大学プレスリリース

    • URL

      http://www.tmd.ac.jp/press-release/20150429/index.html

    • Related Report
      2014 Research-status Report
  • [Patent(Industrial Property Rights)] 簡便で高効率の遺伝子改変非ヒト哺乳動物の作製方法2014

    • Inventor(s)
      田中光一、相田知海、和田悠作
    • Industrial Property Rights Holder
      国立大学法人東京医科歯科大学、株式会社ファスマック
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2014-232963
    • Filing Date
      2014-11-17
    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2017-05-10  

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