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FTIR analysis of photosynthetic water oxidation

Research Project

Project/Area Number 26840091
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Plant molecular biology/Plant physiology
Research InstitutionNagoya University

Principal Investigator

Nagao Ryo  名古屋大学, 理学(系)研究科(研究院), 助教 (30633961)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywords光合成 / 水分解反応 / 赤外分光 / 植物・藻類
Outline of Final Research Achievements

Photosynthetic water oxidation proceeds through five intermediates, which results in the release of four electrons, four protons, and one O2 molecule by splitting two water molecules. To examine the role of the YZ network in water oxidation, we analyzed a site-directed mutant of D1-N298A using Fourier transformed infrared (FTIR) spectroscopy. FTIR analysis showed that the D1-N298A mutation decreased the efficiency of the S2 → S3 transition and virtually blocked the S3 → S0 transition, indicating that the hydrogen-bond network around YZ is employed as a proton transfer pathway during the S2 → S3 and S3 → S0 transitions.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (17 results)

All 2016 2015 2014

All Journal Article (8 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 8 results,  Acknowledgement Compliant: 2 results,  Open Access: 1 results) Presentation (9 results) (of which Int'l Joint Research: 2 results,  Invited: 2 results)

  • [Journal Article] Redox potential of the terminal quinone electron acceptor QB in photosystem II reveals the mechanism of electron-transfer regulation2016

    • Author(s)
      Y. Kato, R. Nagao, T. Noguchi
    • Journal Title

      Proc. Natl. Acad. Sci. U.S.A.

      Volume: 113 Issue: 3 Pages: 620-625

    • DOI

      10.1073/pnas.1520211113

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The N-terminal sequence of the extrinsic PsbP protein modulates the redox potential of Cyt b559 in photosystem II2016

    • Author(s)
      T. Nishimura, R. Nagao, T. Noguchi, J. Nield, F. Sato, K. Ifuku
    • Journal Title

      Sci. Rep.

      Volume: 6 Issue: 1 Pages: 21490-21490

    • DOI

      10.1038/srep21490

    • NAID

      120005818272

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Effects of extrinsic proteins on the protein conformation of the oxygen-evolving center in cyanobacterial photosystem II as revealed by Fourier transform infrared spectroscopy2015

    • Author(s)
      R. Nagao, T. Tomo, T. Noguchi
    • Journal Title

      Biochemistry

      Volume: 54 Issue: 11 Pages: 2022-2031

    • DOI

      10.1021/acs.biochem.5b00053

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Control Mechanism of Excitation Energy Transfer in a Complex Consisting of Photosystem II and Fucoxanthin Chlorophyll a/c-Binding Protein2014

    • Author(s)
      Ryo Nagao, Makio Yokono, Tatsuya Tomo,and Seiji Akimoto
    • Journal Title

      Journal of Physical Chemistry Letters

      Volume: 5 Issue: 17 Pages: 2983-2987

    • DOI

      10.1021/jz501496p

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Fourier transform infrared detection of a polarizable proton trapped between photooxidized tyrosine Yz and a coupled histidine in photosystem II : Relevance to the proton transfer mechanism of water oxidation2014

    • Author(s)
      S. Nakamura, R. Nagao, R. Takahashi, and T. NoguchiS. Nakamura, R. Nagao, R. Takahashi, T. Noguchi
    • Journal Title

      Biochemistry

      Volume: 53 Issue: 19 Pages: 3131-3144

    • DOI

      10.1021/bi500237y

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Light-Harvesting Ability of the Fucoxanthin Chlorophyll a/c-Binding Protein Associated with Photosystem II from the Diatom Chaetoceros gracilis As Revealed by Picosecond Time-Resolved Fluorescence Spectroscopy2014

    • Author(s)
      Ryo Nagao, Makio Yokono, Ayaka Teshigahara, Seiji Akimoto, and Tatsuya Tomo
    • Journal Title

      JOURNAL OF PHYSICAL CHEMISTRY B

      Volume: 118 Issue: 19 Pages: 5093-5100

    • DOI

      10.1021/jp502035y

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Excitation relaxation dynamics and energy transfer in fucoxanthin-chlorophyll a/c-protein complexes, probed by time-resolved fluorescence2014

    • Author(s)
      Seiji Akimoto, Ayaka Teshigahara, Makio Yokono, Mamoru Mimuro, Ryo Nagao, Tatsuya Tomo
    • Journal Title

      BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

      Volume: 1837 Issue: 9 Pages: 1514-1521

    • DOI

      10.1016/j.bbabio.2014.02.002

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Identification of the basic amino acid residues on the PsbP protein involved in the electrostatic interaction with photosystem II2014

    • Author(s)
      T. Nishimura, C. Uno, K. Ido, R. Nagao, T. Noguchi, F. Sato and K. Ifuku
    • Journal Title

      Biochim. Biophys. Acta

      Volume: (in press) Issue: 9 Pages: 1447-1453

    • DOI

      10.1016/j.bbabio.2013.12.012

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] 光化学系IIの部位特異的変異導入による反応中心クロロフィルの電子構造の解明2016

    • Author(s)
      長尾遼、山口元気、三富達也、野口巧
    • Organizer
      第57回日本植物生理学会
    • Place of Presentation
      岩手大学上田キャンパス
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] Hydrogen-bond network around Yz controls proton transfer in photosynthetic water oxidation2016

    • Author(s)
      Ryo Nagao, Hanayo Ueoka-Nakanishi, Takumi Noguchi
    • Organizer
      7th OCARINA International Symposium
    • Place of Presentation
      大阪市立大学
    • Year and Date
      2016-03-17
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Role of the hydrogen bond network around Yz in photosynthetic water oxidation2015

    • Author(s)
      Ryo Nagao, Hanayo Ueoka-Nakanishi, Takumi Noguchi
    • Organizer
      International Meeting Photosynthesis Research for Sustainability-2015
    • Place of Presentation
      Crete, Greece
    • Year and Date
      2015-09-21
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] FTIR study on the role of hydrogen bond network around Yz during photosynthetic water oxidation2015

    • Author(s)
      Ryo Nagao, Hanayo Ueoka-Nakanishi, Takumi Noguchi
    • Organizer
      第53回日本生物物理学会
    • Place of Presentation
      金沢大学
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] チロシンZが関与する水素結合ネットワークの光合成水分解反応における役割2015

    • Author(s)
      長尾遼、中西華代、野口巧
    • Organizer
      第23回光合成セミナー2015
    • Place of Presentation
      龍谷大学大宮キャンパス
    • Year and Date
      2015-07-11
    • Related Report
      2015 Annual Research Report
  • [Presentation] Functional role of a hydrogen bond network around YZ during photosynthetic water oxidation2015

    • Author(s)
      Ryo Nagao, Takumi Noguchi
    • Organizer
      Gordon Research Conference on Photosynthesis
    • Place of Presentation
      Bentley University, USA
    • Year and Date
      2015-06-28
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] チロシンZ周辺の水素結合ネットワークが光合成水分解反応に与える影響2015

    • Author(s)
      長尾遼、中西華代、野口巧
    • Organizer
      第6回日本光合成学会
    • Place of Presentation
      岡山国際交流センター
    • Year and Date
      2015-05-22
    • Related Report
      2015 Annual Research Report
  • [Presentation] 光化学系IIタンパク質への部位特異的変異導入による水分解反応機構の解析2015

    • Author(s)
      長尾遼、中西華代、野口巧
    • Organizer
      第56回日本植物生理学会
    • Place of Presentation
      東京農業大学 世田谷キャンパス
    • Year and Date
      2015-03-16 – 2015-03-18
    • Related Report
      2014 Research-status Report
  • [Presentation] Site-directed mutagenesis study of amino acid residues relevant to photosynthetic water oxidation in photosystem II2014

    • Author(s)
      Ryo Nagao, Hanayo Ueoka-Nakanishi, Takumi Noguchi
    • Organizer
      第52回日本生物物理学会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2017-05-10  

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