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Mechanism that coordinates DNA replication and transcription activities in human ribosomal RNA gene

Research Project

Project/Area Number 26840114
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Genetics/Chromosome dynamics
Research InstitutionThe University of Tokyo (2015-2017)
National Institute of Genetics (2014)

Principal Investigator

Akamatsu Yufuko  東京大学, 分子細胞生物学研究所, 助教 (50381661)

Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2015: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
KeywordsリボソームRNA遺伝子 / DNA複製 / ゲノム安定性 / RNA poymerase I / 転写 / ゲノム不安定性 / rRNA遺伝子 / DNA複製阻害点
Outline of Final Research Achievements

In S phase, the replication and transcription of genomic DNA need to accommodate each other, otherwise their machineries collide, with chromosomal instability as a possible consequence. The ribosomal RNA gene (rDNA) is the most actively transcribed gene in human cells and the activity is high during S phase. To understand how the collision between rDNA transcription and replication is prevented, the role of replication fork barrier (RFB) was investigated. We found that the Sal-box elements that are able to terminate rDNA transcription were the cis elements for the RFB activity. When fork arrests at these sites failed, rDNA transcription impedes replication fork progression. These results reveal a role of RFB for coordinating the progression of replication and transcription activity in highly transcribed rDNA.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (3 results)

All 2016 2015 2014

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (2 results)

  • [Journal Article] The Human RNA Polymerase I Transcription Terminator Complex Acts as a Replication Fork Barrier That Coordinates the Progress of Replication with rRNA Transcription Activity2015

    • Author(s)
      Yufuko Akamatsu and Takehiko Kobayashi
    • Journal Title

      Molecular and Cellular Biology

      Volume: 35 Pages: 1871-1881

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] ヒトribosomal RNA 遺伝子に存在するreplication fork barrierの機能解明2016

    • Author(s)
      赤松 由布子、小林 武彦
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Research-status Report
  • [Presentation] The PolI Transcription Terminator Complex Sal-box/TTF-1 Acts as Replication Fork Barrier in Human Cells2014

    • Author(s)
      Yufuko Akamatsu
    • Organizer
      3R Symposium
    • Place of Presentation
      Gotemba Kogen Hotel, Gotemba, Shizuoka, Japan
    • Year and Date
      2014-11-17 – 2014-11-21
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2019-03-29  

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