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Process of genomic and chromosomal evolution in vertebrates inferred from comparative gene mapping for archaic-looking fishes

Research Project

Project/Area Number 26840118
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Evolutionary biology
Research InstitutionInstitute of Physical and Chemical Research (2017)
Nagoya University (2014-2016)

Principal Investigator

Uno Yoshinobu  国立研究開発法人理化学研究所, ライフサイエンス技術基盤研究センター, 研究員 (60609717)

Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
KeywordsFISH / 核型進化 / マイクロ染色体 / 脊椎動物 / 染色体地図 / 条鰭類 / 四肢動物 / Polypterus / ポリプテルス / ガー / 硬骨魚類
Outline of Final Research Achievements

To deduce genomic and chromosomal evolution including the origins of microchromosomes in vertebrates, I constructed chromosome maps of 210 functional genes including 92 genes on microchromosomes in the chicken using FISH mapping for the extant fish in the most basal group of the ray-finned fish, the gray bichir (Polypterus senegalus), which has no microchromosomes. All of 18 genetic linkages of the chicken microchromosomes are highly conserved in Polypterus chromosomes. Moreover, the results of comparisons of chromosome synteny among the other vertebrates including Polypterus collectively suggest that the protokaryotypes of tetrapods and actinopterygians had contained many microchromosomes, each of whose linkages were conserved in the single microchromosomes of the chicken.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (5 results)

All 2016 2015

All Presentation (5 results) (of which Int'l Joint Research: 2 results,  Invited: 1 results)

  • [Presentation] The origin and evolutionary process of microchromosomes in ray-finned fishes and tetrapods inferred from comparative gene mapping for Polypterus2016

    • Author(s)
      Yoshinobu Uno, Chizuko Nishida, Atsushi Toyoda, Asao Fujiyama, Masataka Okabe, Yoichi Matsuda
    • Organizer
      The joint meeting of the 22nd International Congress of Zoology and the 87th Meeting of the Zoological Society of Japan
    • Place of Presentation
      沖縄科学技術大学院大学(沖縄)
    • Year and Date
      2016-11-14
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] ポリプテルスの比較染色体解析により明らかになった脊椎動物におけるマイクロ染色体の進化過程2016

    • Author(s)
      宇野 好宣,西田 千鶴子,豊田 敦,藤山 秋佐夫,岡部 正隆,松田 洋一
    • Organizer
      染色体学会第66回年会
    • Place of Presentation
      東京大学(東京)
    • Year and Date
      2016-11-02
    • Related Report
      2016 Research-status Report
  • [Presentation] 古代魚の比較染色体マッピングによる脊椎動物のマイクロ染色体の進化過程の解析2015

    • Author(s)
      宇野好宣、西田千鶴子、豊田敦、藤山秋佐夫、岡部正隆、松田洋一
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学(仙台)
    • Year and Date
      2015-09-24
    • Related Report
      2015 Research-status Report
  • [Presentation] 古代魚ポリプテルスの比較染色体解析により明らかになった脊椎動物におけるマイクロ染色体の進化過程2015

    • Author(s)
      宇野好宣、西田千鶴子、豊田敦、藤山秋佐夫、岡部正隆、松田洋一
    • Organizer
      日本進化学会第17回大会
    • Place of Presentation
      中央大学(東京)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
  • [Presentation] Evolution of microchromosomes in vertebrates.2015

    • Author(s)
      Yoshinobu Uno
    • Organizer
      The 5th Asian Chromosome Colloquium
    • Place of Presentation
      Kasetsart University(タイ、バンコク)
    • Year and Date
      2015-04-29
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited

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Published: 2014-04-04   Modified: 2019-03-29  

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