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Isolation and characterization of novel phages infectious to Pectobacterium for phage therapy against wasabi soft-rot

Research Project

Project/Area Number 26850027
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Plant protection science
Research InstitutionShizuoka University

Principal Investigator

Hirata Hisae  静岡大学, 農学部, 准教授 (00432196)

Research Collaborator DORA Hideo  
HORIIKE Tokumasa  
NISHIJIMA Takuya  
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2016: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Keywordsワサビ軟腐病 / バクテリオファージ / 軟腐病菌 / ワサビ / 蔬菜類軟腐病菌 / 植物病原細菌 / 軟腐病
Outline of Final Research Achievements

Soft rot of Japanese horseradish (wasabi) is a seasonally serious disease caused by Pectobacterium carotovorum subsp. carotovorum (Pcc), P. carotovorum subsp. wasabiae or some other soft rot bacteria. For preventing bacterial disease, phage therapy could be useful, especially in a wasabi field where agricultural chemicals cannot be applied. In this study, lytic phages infectious to some Pcc isolated from soft-rotted wasabi were found in a plaque assay. Sequencing of the phage genomic DNA suggested that each phage is new species of the family Podoviridae and some have similarities to other Pectobacterium phages reported in other countries. Mutational analysis against host bacteria was performed and host factors involved in lytic reaction were identified. It is also notable finding that their host range corresponds to the bacterial groups based on genetic differences, so that the phages are also useful for detection and classification of Pcc isolated from wasabi.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (5 results)

All 2017 2016 2015

All Journal Article (2 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Open Access: 1 results,  Acknowledgement Compliant: 2 results) Presentation (3 results)

  • [Journal Article] Genome Sequence of Pectobacterium carotovorum Phage PPWS1, Isolated from Japanese Horseradish [Eutrema japonicum (Miq.) Koidz] Showing Soft-Rot Symptoms2016

    • Author(s)
      Hirata H, Kashihara M, Horiike T, Suzuki T, Dohra H, Netsu O, Tsuyumu S.
    • Journal Title

      Genome Announcements

      Volume: 4 Issue: 2 Pages: 1-2

    • DOI

      10.1128/genomea.01625-15

    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] SlyA regulates motA and motB, virulence and stress-related genes under conditions induced by the PhoP-PhoQ system in Dickeya dadantii 39372015

    • Author(s)
      Haque MM, Hirata H, Tsuyumu S.
    • Journal Title

      Research in Microbiology

      Volume: 166 Issue: 6 Pages: 467-75

    • DOI

      10.1016/j.resmic.2015.05.004

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] 静岡県内で分離されたワサビ軟腐病菌の溶菌性バクテリオファージについて2017

    • Author(s)
      柏原美紗子・大津菜文・青木雄太・平田久笑
    • Organizer
      平成29年度日本植物病理学会大会
    • Place of Presentation
      アイーナ・いわて県民情報交流センター(岩手県盛岡市)
    • Year and Date
      2017-04-26
    • Related Report
      2016 Annual Research Report
  • [Presentation] ワサビ軟腐病菌の溶菌性ファージの分離と同定2016

    • Author(s)
      柏原美紗子・大津菜文・西島卓也・堀池徳祐・道羅英夫・瀧川雄一・平田久笑
    • Organizer
      平成28年度日本植物病理学会関西部会
    • Place of Presentation
      静岡県コンベンションアーツセンター グランシップ(静岡県静岡市)
    • Year and Date
      2016-09-29
    • Related Report
      2016 Annual Research Report
  • [Presentation] ワサビ軟腐病菌を宿主とするバクテリオファージF100の全ゲノム解読2015

    • Author(s)
      柏原美紗子・道羅英夫・堀池徳祐・鈴木智大・下山祐紀・露無慎二・平田久笑
    • Organizer
      日本植物病理学会 創立100周年記念大会(平成27年度大会)
    • Place of Presentation
      明治大学駿河台キャンパス(東京)
    • Year and Date
      2015-03-28 – 2015-03-31
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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