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Identification of a novel mechanism that regulates replication and transcription at the RNA level in wild-type rabies virus

Research Project

Project/Area Number 26850187
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Veterinary medical science
Research InstitutionNihon University

Principal Investigator

SUZUKI Yuki  日本大学, 生物資源科学部, 助教 (30712492)

Research Collaborator INOUE Satoshi  
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords狂犬病ウイルス / 複製・転写制御 / 3' UTR / RNAモチーフ / N遺伝子 / 高度保存領域 / 複製・転写調節 / RNA結合蛋白質 / UTR
Outline of Final Research Achievements

The aim of this study was to find a novel mechanism that regulates replication and transcription in rabies virus (RABV) at the RNA level. The RNA motifs conserved among 119 wild-type RABV strains were found at the 5’ end of N CDS and 3’-UTR of M gene. Since the reporter activities using the luciferase mRNAs with the 3’UTR of RABV genes were lower than that of control luciferase mRNA, the 3’-UTR of M and G mRNAs may promote the degradation of M and G mRNAs, respectively. The mini genome reporter assay showed that the synonymous mutations in conserved motif at the 5’ end of N CDS reduced the luciferase activities. In addition, the replication yield of recombinant RABV with synonymous mutations in the conserved motif was lower than that of parental RABV strain. These results suggest that the conserved motif at the 5’ end of N CDS encode nucleotide sequences are required for the effective replication of RABV.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (26 results)

All 2016 2015 2014 Other

All Journal Article (9 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 9 results,  Open Access: 7 results,  Acknowledgement Compliant: 3 results) Presentation (15 results) (of which Invited: 2 results) Remarks (2 results)

  • [Journal Article] An RNA-dependent RNA polymerase gene in bat genomes derived from an ancient negative-strand RNA virus.2016

    • Author(s)
      Horie M, Kobayashi Y, Honda T, Fujino K, Akasaka T, Kohl C, Wibbelt G, Muhldorfer K, Kurth A, Muller MA, Corman VM, Gillich N, Suzuki Y, Schwemmle M, Tomonaga K.
    • Journal Title

      Sci Rep.

      Volume: 6 Issue: 1 Pages: 25873-25873

    • DOI

      10.1038/srep25873

    • NAID

      120005822794

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Molecular epidemiological study of adenovirus infecting western lowland gorillas and humans in and around Moukalaba-Doudou National Park (Gabon).2016

    • Author(s)
      Nze-Nkogue C, Horie M, Fujita S, Ogino M, Kobayashi Y, Mizukami K, Masatani T, Ezzikouri S, Matsuu A, Mizutani T, Ozawa M, Yamato O, Ngomanda A, Yamagiwa J, Tsukiyama-Kohara K
    • Journal Title

      Virus Genes

      Volume: 52 Issue: 5 Pages: 671-678

    • DOI

      10.1007/s11262-016-1360-8

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Computational and molecular analysis of conserved influenza A virus RNA secondary structures involved in infectious virion production2016

    • Author(s)
      Kobayashi, Y.(新姓:鈴木), Dadonaite, B., Doremalen, N., Suzuki, Y., Barclay, W., and Pybus, O.G.
    • Journal Title

      RNA Biology

      Volume: 13 Issue: 9 Pages: 883-894

    • DOI

      10.1080/15476286.2016.1208331

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Exaptation of Bornavirus-Like Nucleoprotein Elements in Afrotherians.2016

    • Author(s)
      Kobayashi Y, Horie M, Nakano A, Murata K, Itou T, Suzuki Y.
    • Journal Title

      PLoS Pathog.

      Volume: 12 Issue: 8 Pages: e1005785-e1005785

    • DOI

      10.1371/journal.ppat.1005785

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Molecular epidemiological tracing of a cattle rabies outbreak lasting less than a month in Rio Grande do Sul in southern Brazil.2016

    • Author(s)
      Itou T, Fukayama T, Mochizuki N, Kobayashi Y, Deberaldini ER, Carvalho AA, Ito FH, Sakai T.
    • Journal Title

      BMC Res Notes.

      Volume: 9(1) Issue: 1 Pages: 87-87

    • DOI

      10.1186/s13104-016-1898-5

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Identification and Expression Profiles of microRNA in Dolphin2015

    • Author(s)
      Takao Segawa, Yuki Kobayashi, Satoko Inamoto, Miwa Suzuki, Tomoko Endoh, Takuya Itou
    • Journal Title

      Zoological Science

      Volume: 33 Issue: 1 Pages: 92-97

    • DOI

      10.2108/zs150090

    • NAID

      40020738767

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Establishing conditions for the storage and elution of rabies virus RNA using FTA<sup>®</sup> cards2015

    • Author(s)
      Sakai T, Ishii A, Segawa T, Takagi Y, Kobayashi Y, Itou T
    • Journal Title

      Journal of Veterinary Medical Science

      Volume: 77 Issue: 4 Pages: 461-465

    • DOI

      10.1292/jvms.14-0227

    • NAID

      130005067018

    • ISSN
      0916-7250, 1347-7439
    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Origin of an endogenous bornavirus-like nucleoprotein element in thirteen-lined ground squirrels2014

    • Author(s)
      Yoshiyuki Suzuki, Yuki Kobayashi, Masayuki Horie, Keizo Tomonaga
    • Journal Title

      Genes & Genetic Systems

      Volume: 89 Issue: 3 Pages: 143-148

    • DOI

      10.1266/ggs.89.143

    • NAID

      130004703733

    • ISSN
      1341-7568, 1880-5779
    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Easy-to-use rapid gene amplification method for direct detection of RNA and DNA viruses in sera and feces from various animals2014

    • Author(s)
      Segawa T, Kobayashi Y, Sase Y, Itou T, Suzuki M, Endoh T, Nakanishi T, Sakai
    • Journal Title

      J Virol Methods.

      Volume: 201C Pages: 31-37

    • DOI

      10.1016/j.jviromet.2014.01.019

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] Molecular analysis of conserved RNA secondary structures predicted in the packaging signals of influenza A virus M segment2016

    • Author(s)
      Kobayashi, Y.(新姓:鈴木), Dadonaite, B., Dorenalan, N., Suzuki, Y., Barclay, W., and Pybus O.G.
    • Organizer
      第64回日本ウイルス学会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2016-10-23
    • Related Report
      2016 Annual Research Report
  • [Presentation] Unexpected broad distribution of endogenous orthomyxovirus-like elements in arthropod genomes2016

    • Author(s)
      Horie, M., and Kobayashi, Y.(新姓:鈴木)
    • Organizer
      第64回日本ウイルス学会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2016-10-23
    • Related Report
      2016 Annual Research Report
  • [Presentation] Establishment of L gene-deficient rabies virus and its utility for functional studies on L protein2016

    • Author(s)
      Nakagawa, K., Ito, N., Kobayashi, Y.(新姓:鈴木), Okada, K., and Sugiyama, M.
    • Organizer
      第64回日本ウイルス学会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2016-10-23
    • Related Report
      2016 Annual Research Report
  • [Presentation] ハンドウイルカの肺由来細胞株の樹立と性状解析2016

    • Author(s)
      彦部京助, 瀬川太雄, 鈴木美和, 小林由紀(新姓:鈴木), 前田健, 伊藤琢也
    • Organizer
      第22回日本野生動物医学会大会
    • Place of Presentation
      宮崎市民プラザ(宮崎県・宮崎市)
    • Year and Date
      2016-09-16
    • Related Report
      2016 Annual Research Report
  • [Presentation] ンドウイルカにおける肺培養細胞の作製 -鯨類の遺伝資源保存に向けて2016

    • Author(s)
      瀬川太雄, 彦部京助, 鈴木美和, 小林由紀(新姓:鈴木), 前田健, 伊藤琢也
    • Organizer
      平成28年度日本水産学会秋季大会
    • Place of Presentation
      近畿大学農学部(奈良県・奈良市)
    • Year and Date
      2016-09-08
    • Related Report
      2016 Annual Research Report
  • [Presentation] アフリカ獣上目ゲノムに内在化したボルナウイルス核蛋白質由来エレメント(EBLN)の蛋白質発現解析2016

    • Author(s)
      中野亜由美, 小林由紀(新姓:鈴木), 堀江真行, 鈴木善幸, 伊藤琢也
    • Organizer
      第159回日本獣医学会学術会
    • Place of Presentation
      日本大学生物資源科学部(神奈川県・藤沢市)
    • Year and Date
      2016-09-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] エチオピアにおける狂犬病ウイルスの分子系統解析2016

    • Author(s)
      伊藤優真, 日高侑也, Dressa, F., 小林由紀(新姓:鈴木), 伊藤琢也
    • Organizer
      第159回日本獣医学会学術会
    • Place of Presentation
      日本大学生物資源科学部(神奈川県・藤沢市)
    • Year and Date
      2016-09-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] L遺伝子欠損型狂犬病ウイルスを活用したL蛋白質保存領域の機能解析2016

    • Author(s)
      中川賢人, 小林由紀(新姓:鈴木), 伊藤直人, 岡田和真, 杉山誠
    • Organizer
      第159回日本獣医学会学術会
    • Place of Presentation
      日本大学生物資源科学部(神奈川県・藤沢市)
    • Year and Date
      2016-09-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] ハンドウイルカにおけるMRPの発現解析2016

    • Author(s)
      新田野乃, 小林由紀(新姓:鈴木), 小林淳也, 瀬川太雄, 猪島康雄, 前田健, 鈴木美和, 鯉江洋, 伊藤琢也
    • Organizer
      第159回日本獣医学会学術会
    • Place of Presentation
      日本大学生物資源科学部(神奈川県・藤沢市)
    • Year and Date
      2016-09-06
    • Related Report
      2016 Annual Research Report
  • [Presentation] A型インフルエンザウイルスセグメントに予測される高度保存RNA二次構造はパッケージングに寄与するのか?2015

    • Author(s)
      小林由紀
    • Organizer
      日本遺伝学会第87回大会
    • Place of Presentation
      東北大学(川内北キャンパス)(宮城県・仙台市)
    • Year and Date
      2015-09-24
    • Related Report
      2015 Research-status Report
  • [Presentation] アフリカ獣上目ゲノムに内在化したボルナウイルス核蛋白質由来エレメントの機能獲得をもたらした進化メカニズム2015

    • Author(s)
      小林由紀、村田浩一、堀江真行、伊藤琢也、鈴木善幸
    • Organizer
      第158回日本獣医学会学術集会
    • Place of Presentation
      北里大学獣医学部(青森県・十和田市)
    • Year and Date
      2015-09-07
    • Related Report
      2015 Research-status Report
  • [Presentation] ボルナウイルス由来エレメントの機能獲得メカニズム2015

    • Author(s)
      小林由紀
    • Organizer
      第17回日本進化学会
    • Place of Presentation
      中央大学後楽園キャンパス(東京都・文京区)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] ブラジルの吸血および食果コウモリ由来狂犬病ウイルスの分子系統解析2014

    • Author(s)
      日下部美帆、小林由紀、Fumio H Ito、酒井健夫、伊藤琢也
    • Organizer
      第157回日本獣医学会学術集会
    • Place of Presentation
      北海道大学
    • Year and Date
      2014-09-09 – 2014-09-12
    • Related Report
      2014 Research-status Report
  • [Presentation] ハンドウイルカmicroRNAの同定と発現解析2014

    • Author(s)
      稲本理子、瀬川太雄、小林由紀、鈴木美和、遠藤智子、伊藤琢也
    • Organizer
      第157回日本獣医学会学術集会
    • Place of Presentation
      北海道大学
    • Year and Date
      2014-09-09 – 2014-09-12
    • Related Report
      2014 Research-status Report
  • [Presentation] 内在性ボルナ病ウイルス様エレメントと宿主の進化2014

    • Author(s)
      小林由紀
    • Organizer
      第16回日本進化学会
    • Place of Presentation
      大阪高槻現代劇場
    • Year and Date
      2014-08-21 – 2014-08-24
    • Related Report
      2014 Research-status Report
    • Invited
  • [Remarks] 日本大学生物資源科学部

    • URL

      http://kenkyu-web.cin.nihon-u.ac.jp/Profiles/110/0010955/profile.html

    • Related Report
      2015 Research-status Report
  • [Remarks] 日本大学生物資源科学部HP

    • URL

      http://kenkyu-web.cin.nihon-u.ac.jp/Profiles/110/0010955/profile.html

    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2018-03-22  

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