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Role of linker histone in the formation and function of nucleolus.

Research Project

Project/Area Number 26850230
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied molecular and cellular biology
Research InstitutionThe University of Tokyo

Principal Investigator

Hayakawa Koji  東京大学, 大学院農学生命科学研究科(農学部), 特任助教 (50636800)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsリンカーヒストン / 核小体 / エピジェネティクス / クロマチン
Outline of Final Research Achievements

Linker histone H1 directly binds with DNA and thereby remodels and stabilizes the chromatin structure. Ten H1 variants in mammals are classified into somatic and germ cell-specific variants. H1T is one of the germ cell-specific H1s that is highly expressed in testis, but little more than this expression profile is known about H1T.
Here, we describe the target loci and function of H1T. To elucidate the intracellular localization and target loci of H1T, fluorescent immunostaining and ChIP-seq were performed. H1T accumulated in nucleoli and predominantly targeted ribosomal DNA (rDNA) repeats, which differs from somatic H1s’ targets. Furthermore, the function of H1T at rDNA repeats was analyzed. According to the results of DNase I sensitive assay and RT-qPCR, H1T repressed rDNA transcription by condensing the chromatin structure. Imaging analysis indicated that H1T expression affected nucleolar formation. Collectively, H1T plays a role in rDNA transcription by targeting rDNA repeats.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (10 results)

All 2016 2015 2014

All Journal Article (5 results) (of which Peer Reviewed: 5 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (5 results) (of which Invited: 1 results)

  • [Journal Article] Linker histone variant H1T targets rDNA repeats.2016

    • Author(s)
      Tani R, Hayakawa K, Tanaka S, Shiota K.
    • Journal Title

      Epigenetics

      Volume: 11(4) Issue: 4 Pages: 288-302

    • DOI

      10.1080/15592294.2016.1159369

    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Novel O-GlcNAcylation on Ser40 of canonical H2A isoforms specific to viviparity.2016

    • Author(s)
      Hirosawa M, Hayakawa K, Yoneda C, Arai D, Shiota H, Suzuki T, Tanaka S, Dohmae N, Shiota K.
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1

    • DOI

      10.1038/srep31785

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] An epigenetic regulatory element of the Nodal gene in the mouse and human genomes2015

    • Author(s)
      Daisuke Arai, Koji Hayakawa, Jun Ohgane, Mitsuko Hirosawa, Yoichi Nakao, Satoshi Tanaka, Kunio Shiota
    • Journal Title

      Mechanisms of Development

      Volume: 136 Pages: 143-154

    • DOI

      10.1016/j.mod.2014.12.003

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Isolation and manipulation of mouse trophoblast stem cells2015

    • Author(s)
      Hayakawa K, Himeno E, Tanaka S, Kunath T.
    • Journal Title

      Curr Protoc Stem Cell Biol

      Volume: 32 Issue: 1 Pages: 1-32

    • DOI

      10.1002/9780470151808.sc01e04s32

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] N-Acetylmannosamine improves sleep-wake quality in middle-aged mice: relevance to autonomic nervous function.2015

    • Author(s)
      Kuwahara M, Ito K, Hayakawa K, Yagi S, Shiota K.
    • Journal Title

      Auton Neurosci

      Volume: 187 Pages: 56-62

    • DOI

      10.1016/j.autneu.2014.11.005

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] 遺伝子領域におけるリンカーヒストンバリアントH1Tの標的および機能2016

    • Author(s)
      早川 晃司、谷 瑠依子、田中 智
    • Organizer
      第10回日本エピジェネティクス研究会年会
    • Place of Presentation
      千里ライフサイエンスセンター (大阪府 豊中市)
    • Year and Date
      2016-05-19
    • Related Report
      2016 Annual Research Report
  • [Presentation] リンカーヒストンバリアントH1TはrDNA領域を標的とし、rRNAの発現を抑制する2015

    • Author(s)
      谷 瑠依子、早川 晃司、田中 智、塩田 邦郎
    • Organizer
      第108回日本繁殖生物学会大会
    • Place of Presentation
      宮崎大学木花キャンパス、宮崎
    • Year and Date
      2015-09-16
    • Related Report
      2015 Research-status Report
  • [Presentation] Linker histone variant H1T targets rDNA repeats2014

    • Author(s)
      Ruiko Tani, Koji Hayakawa, Satoshi Tanaka, Kunio Shiota
    • Organizer
      The 2014 ASCB/IFCB meeting
    • Place of Presentation
      フィラデルフィア、アメリカ
    • Year and Date
      2014-12-06 – 2014-12-10
    • Related Report
      2014 Research-status Report
  • [Presentation] リンカーヒストンバリアントH1TはrDNA領域のクロマチン構造を凝集させる2014

    • Author(s)
      谷 瑠依子、早川 晃司、田中 智、塩田 邦郎
    • Organizer
      第87回 日本生化学会大会
    • Place of Presentation
      国立京都国際会館、京都
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Research-status Report
  • [Presentation] 卵子特異的リンカーヒストンH1fooによる卵子特異的エピゲノム形成2014

    • Author(s)
      早川 晃司、中西 もも、田中 智、塩田 邦郎
    • Organizer
      第8回 日本エピジェネティクス研究会年会
    • Place of Presentation
      伊藤国際学術研究センター、東京
    • Year and Date
      2014-05-25 – 2014-05-27
    • Related Report
      2014 Research-status Report
    • Invited

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Published: 2014-04-04   Modified: 2018-03-22  

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