• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Investigation on molecular epidemiology and clinical features of diarrheal viruses including emerging strains in Indonesia

Research Project

Project/Area Number 26860434
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Hygiene and public health
Research InstitutionThe University of Tokyo

Principal Investigator

TAKANASHI Sayaka  東京大学, 大学院医学系研究科(医学部), 助教 (20645709)

Co-Investigator(Renkei-kenkyūsha) USHIJIMA Hiroshi  日本大学, 医学部, 上席研究員 (10091068)
OKITSU Shoko  日本大学, 医学部, 客員研究員 (10082215)
Research Collaborator KALESARAN Angela  
THONGPRACHUM Aksara  
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,250,000 (Direct Cost: ¥2,500,000、Indirect Cost: ¥750,000)
Fiscal Year 2016: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2015: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywords急性胃腸炎 / ロタウイルス / ノロウイルス / 小児 / インドネシア / 分子疫学 / 入院例 / 小児急性胃腸炎
Outline of Final Research Achievements

Four hundred and forty one fecal specimens were collected from hospitalized pediatric patients and screened for diarrheal viruses by RT-PCR. Nine target viruses were detected in 262 out of 441 (59.4%) samples. Group A rotavirus (59.5%), followed by norovirus GII (16.4%), were the most predominant viral agents. Other viruses such as astrovirus (3.8%), sapovirus (2.7%), human parechovirus (2.7%), enterovirus (2.3%), adenovirus (2%), norovirus GI(1.1%), and Aichi virus (0.2%) were also detected. Rotavirus cases were found throughout the year, with two peaks in April and September. G1P[8] strain was the most prevalent (69.5%) G-P combination, followed by G3P[8] (16.8%). This study confirmed the diversity of viruses causing acute gastroenteritis among pediatric patients in Indonesia, with group A rotavirus being the most predominant viral agents. They emphasize the importance of introducing rotavirus vaccines in Indonesian children as a prevention strategy to reduce the disease burden.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (42 results)

All 2017 2016 2015 2014 Other

All Int'l Joint Research (2 results) Journal Article (14 results) (of which Int'l Joint Research: 8 results,  Peer Reviewed: 8 results,  Acknowledgement Compliant: 2 results,  Open Access: 2 results) Presentation (25 results) Remarks (1 results)

  • [Int'l Joint Research] サムラトランギ大学(インドネシア)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] オハイオ州立大学(米国)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Multiplex RT-PCR for rapid detection of viruses commonly causing diarrhea in pediatric patients2017

    • Author(s)
      Thongprachum A, Khamrin P, Thi Kim Pham N, Takanashi S, Okitsu S, Shimizu H, Maneekarn N, Hayakawa S, Ushijima H
    • Journal Title

      J Med Virol

      Volume: 89 Issue: 5 Pages: 818-824

    • DOI

      10.1002/jmv.24711

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Evaluation of Immunochromatographic Tests and a New Enzyme Immunoassay for Detection of a Novel GII.17 Norovirus in Stool Samples2017

    • Author(s)
      Ushijima H, Thongprachum A, Khamrin P, Takanashi S, Okitsu S, Maneekarn N, Hayakawa S.
    • Journal Title

      Japanese Journal of Infectious Diseases

      Volume: 70 Issue: 3 Pages: 326-328

    • DOI

      10.7883/yoken.JJID.2016.413

    • NAID

      130005671844

    • ISSN
      1344-6304, 1884-2836
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Molecular epidemiological traits of group A rotaviruses in Japanese children during transitional period of rotavirus vaccine implementation, 2011-2014.2017

    • Author(s)
      Takanashi S, Thongprachum A, Okitsu S, Nishimura S, Kobayashi M, Kikuta H, Yamamoto A, Sugita K, Baba T, Hayakawa S, Mizuguchi M, Ushijima H
    • Journal Title

      Clin Lab

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Cosavirus (family Picornaviridae) in pigs in Thailand and Japan2016

    • Author(s)
      Okitsu S, Khamrin P, Hanaoka N, Thongprachum A, Takanashi S, Fujimoto T, Mizuguchi M, Shimizu H, Hayakawa S, Maneekarn N, Ushijima H
    • Journal Title

      Arch Virol

      Volume: 161 Issue: 1 Pages: 159-163

    • DOI

      10.1007/s00705-015-2637-2

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Cosavirus (family Picornaviridae) in pigs in Thailand and Japan.2016

    • Author(s)
      Okitsu S, Khamrin P, Hanaoka N, Thongprachum A, Takanashi S, Fujimoto T, Mizuguchi M, Shimizu H, Hayakawa S, Maneekarn N, Ushijima H.
    • Journal Title

      Arch Virol

      Volume: 印刷中

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Four-year study of viruses that cause diarrhea in Japanese pediatric outpatients.2015

    • Author(s)
      Thongprachum A, Takanashi S, Kalesaran AF, Okitsu S, Mizuguchi M, Hayakawa S, Ushijima H.
    • Journal Title

      J Med Virol

      Volume: 87 Pages: 1141-8

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Rapid diagnostic tests apply for pediatric infections at outpatient clinic setting.2015

    • Author(s)
      Ushijima H, Thongprachum A, Tran DN, Fujimoto T, Hanaoka N, Okitsu, Takanashi S, Mizuguchi M, Hayakawa S.
    • Journal Title

      Clin Lab

      Volume: 61 Pages: 195-9

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Evaluation of immunochromatography tests for detection of novel GII.17 norovirus in stool samples.2015

    • Author(s)
      Khamrin P, Thongprachum A, Takanashi S, Okitsu S, Maneekarn N, Hayakawa S, Ushijima H.
    • Journal Title

      Euro Surveill

      Volume: Jul

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] ノロウイルスワクチン開発の現状と問題.2015

    • Author(s)
      高梨さやか、牛島廣治.
    • Journal Title

      外来小児科

      Volume: 18: Pages: 178-183

    • Related Report
      2015 Research-status Report
  • [Journal Article] おなかのかぜに効く薬はあるの?2015

    • Author(s)
      高梨さやか.
    • Journal Title

      チャイルドヘルス

      Volume: 18 Pages: 37-40

    • Related Report
      2015 Research-status Report
  • [Journal Article] ウイルス性胃腸炎の我が国における現状.2015

    • Author(s)
      牛島廣治、Thongprachum Aksara、高梨さやか.
    • Journal Title

      最新医学

      Volume: 70 Pages: 2238-2246

    • Related Report
      2015 Research-status Report
  • [Journal Article] ノロウイルス感染症2014

    • Author(s)
      高梨さやか, 牛島廣治
    • Journal Title

      小児内科

      Volume: 46 Pages: 92-96

    • Related Report
      2014 Research-status Report
  • [Journal Article] ロタウイルスワクチン,ノロウイルスワクチン2014

    • Author(s)
      高梨さやか, 牛島廣治
    • Journal Title

      臨床と微生物

      Volume: 41 Pages: 741-748

    • Related Report
      2014 Research-status Report
  • [Journal Article] ロタウイルスワクチンによるヒトと環境中のロタウイルスの動向2014

    • Author(s)
      牛島廣治、沖津祥子、早川智、Leera Kittigul、高梨さやか
    • Journal Title

      臨床とウイルス

      Volume: 42 Pages: 231-236

    • Related Report
      2014 Research-status Report
  • [Presentation] Rotarix接種児の便から検出されたワクチン株VP7遺伝子の変異2017

    • Author(s)
      金子明依、高梨さやか、井上茉南、崎山弘、沖津祥子、牛島廣治、水口雅
    • Organizer
      第13回日本小児消化管感染症研究会
    • Place of Presentation
      大阪大学中之島センター佐治敬三メモリアルホール(大阪府大阪市)
    • Year and Date
      2017-02-04
    • Related Report
      2016 Annual Research Report
  • [Presentation] 最近のノロウイルス流行株に対するイムノクロマト法について2017

    • Author(s)
      牛島廣治、Thongprachum A、高梨さやか、沖津祥子、早川智
    • Organizer
      第13回日本小児消化管感染症研究会
    • Place of Presentation
      大阪大学中之島センター佐治敬三メモリアルホール(大阪府大阪市)
    • Year and Date
      2017-02-04
    • Related Report
      2016 Annual Research Report
  • [Presentation] 2016年冬のノロウイルス感染症の分子疫学(第1報)2017

    • Author(s)
      Thongprachum A、西村修一、小林正明、杉田久美子、中山栄一、菊田英明、馬場常嘉、山本あつ子、疋田敏之、高梨さやか、沖津祥子、早川智、牛島廣治
    • Organizer
      第13回日本小児消化管感染症研究会
    • Place of Presentation
      大阪大学中之島センター佐治敬三メモリアルホール(大阪府大阪市)
    • Year and Date
      2017-02-04
    • Related Report
      2016 Annual Research Report
  • [Presentation] 2014年から2015年の一小児科外来における急性胃腸炎原因ウイルスの検索2016

    • Author(s)
      沖津祥子、疋田敏之、トンプラチュム アクサラ、高梨さやか、早川智、牛島廣治
    • Organizer
      第48回日本小児感染症学会総会・学術集会
    • Place of Presentation
      岡山コンベンションセンター(岡山県岡山市)
    • Year and Date
      2016-11-19
    • Related Report
      2016 Annual Research Report
  • [Presentation] ロタウイルスワクチン様株に起因する急性胃腸炎の実態調査2016

    • Author(s)
      金子明依、高梨さやか、Thongprachum Aksara、井上茉南、花岡希、藤本嗣人、沖津祥子、早川智、水口雅、牛島廣治
    • Organizer
      第48回日本小児感染症学会総会・学術集会
    • Place of Presentation
      岡山コンベンションセンター(岡山県岡山市)
    • Year and Date
      2016-11-19
    • Related Report
      2016 Annual Research Report
  • [Presentation] First report of salivirus (family of Picornaviridae) gastroenteritis in children in Japan.2016

    • Author(s)
      Thongprachum A、 Pham K、 高梨さやか、沖津祥子、菊田英明、山本あつ子、小林正明、杉田久美子、西村修一、馬場常嘉、水口雅、早川智、牛島廣治
    • Organizer
      第48回日本小児感染症学会総会・学術集会
    • Place of Presentation
      岡山コンベンションセンター(岡山県岡山市)
    • Year and Date
      2016-11-19
    • Related Report
      2016 Annual Research Report
  • [Presentation] Molecular characterization of rotavirus detected in a pediatric clinic in Gunma Prefecture, 2014-2015.2016

    • Author(s)
      Shoko Okitsu, Aksara Thongprachum, Toshiyuki Hikita, Pattara Khamrin, Sayaka Takanashi, Satoshi Hayakawa, Hiroshi Ushijima
    • Organizer
      第64回日本ウイルス学会学術集会
    • Place of Presentation
      札幌コンベンションセンター (北海道札幌市)
    • Year and Date
      2016-10-23
    • Related Report
      2016 Annual Research Report
  • [Presentation] A variety of virus commonly causing diarrhea detected in untreated sewage.2016

    • Author(s)
      ksara Thongprachum, Tsuguto Fujimoto, Sayaka Takanashi, Shoko Okitsu, Satoshi Hayakawa, Hiroshi Ushijima
    • Organizer
      第64回日本ウイルス学会学術集会
    • Place of Presentation
      札幌コンベンションセンター (北海道札幌市)
    • Year and Date
      2016-10-23
    • Related Report
      2016 Annual Research Report
  • [Presentation] Immune response against different genotypes of noroviruses in two adults with the recurrent Infection.2016

    • Author(s)
      Hiroshi Ushijima, Hiroyuki Saito, Yuko Shimizu, Hiroko Sato, Aksara Thongprachum, Pattara Khamrin, Shoko Okitsu, Sayaka Takanashi, Niwat Maneekarn, Satoshi Hayakawa
    • Organizer
      6th International Calicivirus Conference
    • Place of Presentation
      Savannah(米国)
    • Year and Date
      2016-10-09
    • Related Report
      2016 Annual Research Report
  • [Presentation] Molecular Changes of Norovirus GII.4 variants Associated with the Binding Patterns to Human Blood Group Substances.2016

    • Author(s)
      Aksara Thongprachum, Shin Yazawa, Shoko Okitsu, Sayaka Takanashi, Satoshi Hayakawa, Hiroshi Ushijima
    • Organizer
      6th International Calicivirus Conference
    • Place of Presentation
      Savannah(米国)
    • Year and Date
      2016-10-09
    • Related Report
      2016 Annual Research Report
  • [Presentation] Molecular Epidemiology of Sapovirus Infection in Children with Acute Gastroenteritis from one Clinic, Japan.2016

    • Author(s)
      Shoko Okitsu, Aksara Thongprachum, Pattara Khamrin, Sayaka Takanashi, Toshiyuki Hikita, Satoshi Hayakawa, Niwat Maneekarn, Hiroshi Ushijima
    • Organizer
      6th International Calicivirus Conference
    • Place of Presentation
      Savannah(米国)
    • Year and Date
      2016-10-09
    • Related Report
      2016 Annual Research Report
  • [Presentation] The gastroenteritis viruses circulating in Japanese pediatric patients.2016

    • Author(s)
      Ushijima H, Thongprachum A, Khamrin P, Okitsu S, Takanashi S, Maneekarn N, Hayakawa S.
    • Organizer
      The 11th Japan-China International Conference of Virology
    • Place of Presentation
      Kotohiki-so, Kanonji-shi, Kagawa
    • Year and Date
      2016-07-01
    • Related Report
      2016 Annual Research Report
  • [Presentation] Molecular Epidemiology of Group A Rotavirus in Children with Acute Gastroenteritis in Japan.2016

    • Author(s)
      Nusrat Khandoker, Aksara Thongprachum, Sayaka Takanashi, Shoko Okitsu, Satoshi Hayakawa, Hiroshi Ushijima
    • Organizer
      第57回日本臨床ウイルス学会
    • Place of Presentation
      磐梯熱海温泉ホテル華の湯(福島県郡山市)
    • Year and Date
      2016-06-18
    • Related Report
      2016 Annual Research Report
  • [Presentation] ロタウイルスワクチン導入移行期における同ウイルスの分子疫学的特徴の解明2016

    • Author(s)
      高梨さやか、Thongprachum Aksara、沖津祥子、早川智、水口雅、牛島廣治.
    • Organizer
      第119回日本小児科学会学術集会
    • Place of Presentation
      ロイトン札幌/さっぽろ芸術文化の館(北海道札幌市)
    • Year and Date
      2016-05-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] ロタウイルスワクチン様株に起因する急性胃腸炎の実態調査2016

    • Author(s)
      金子明依、高梨さやか、Thongprachum Aksara、井上茉南、沖津祥子、早川智、水口雅、牛島廣治
    • Organizer
      第119回日本小児科学会学術集会
    • Place of Presentation
      ロイトン札幌/さっぽろ芸術文化の館(北海道札幌市)
    • Year and Date
      2016-05-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] わが国小児のノロウイルスGII.17胃腸炎の流行について2016

    • Author(s)
      Thongprachum Aksara、沖津祥子、高梨さやか、早川智、牛島廣治
    • Organizer
      第57回日本臨床ウイルス学会
    • Place of Presentation
      磐梯熱海温泉ホテル華の湯(福島県郡山市)
    • Related Report
      2016 Annual Research Report
  • [Presentation] Immunological responses to noroviruses (GII.4 and 17) in a patient of the infection.2015

    • Author(s)
      Shimizu Y, Thongprachum A, Takanashi S, Okitsu S, Hayakawa S, Ushijima H.
    • Organizer
      第63回日本ウイルス学会学術集会
    • Place of Presentation
      福岡国際会議場(福岡県福岡市)
    • Year and Date
      2015-11-22
    • Related Report
      2015 Research-status Report
  • [Presentation] Long-term survey on genetic diversity of norovirus in Japanese children2015

    • Author(s)
      Thongprachum Aksara, Takanashi S, Okitsu S, Hayakawa S, Ushijima H.
    • Organizer
      第63回日本ウイルス学会学術集会
    • Place of Presentation
      福岡国際会議場(福岡県福岡市)
    • Year and Date
      2015-11-22
    • Related Report
      2015 Research-status Report
  • [Presentation] Epidemiology of human adenovirus causing diarrhea in Japanese children, 2009-2014.2015

    • Author(s)
      トンプラチュム・アクサラ、カムリン・パターラ、高梨さやか、沖津祥子、清水英明、小林正明、西村修一、菊田英明、山本あつ子、杉田久美子、馬場常嘉、早川智、牛島廣治.
    • Organizer
      第47回日本小児感染症学会総会・学術集会
    • Place of Presentation
      ザ・セレクトンホテル福島(福島県福島市)
    • Year and Date
      2015-10-31
    • Related Report
      2015 Research-status Report
  • [Presentation] 2014年の一小児科外来におけるロタウイルス感染症の疫学.2015

    • Author(s)
      沖津祥子、Thongprachum Aksara, Khamrin Pattara, 高梨さやか、疋田敏之、早川智、牛島廣治.
    • Organizer
      第47回日本小児感染症学会総会・学術集会
    • Place of Presentation
      ザ・セレクトンホテル福島(福島県福島市)
    • Year and Date
      2015-10-31
    • Related Report
      2015 Research-status Report
  • [Presentation] 2014/2015のノロウイルスの特徴-GII.17とイムノクロマトとの関連を中心に-2015

    • Author(s)
      牛島廣治、Thongprachum Aksara, Khamrin Pattara, 菊田英明、山本あつ子、西村修一、小林正明、杉田久美子、馬場常嘉、疋田敏之、中山栄一、清水英明、清水優子、高梨さやか、沖津祥子、早川智.
    • Organizer
      第47回日本小児感染症学会総会・学術集会
    • Place of Presentation
      ザ・セレクトンホテル福島(福島県福島市)
    • Year and Date
      2015-10-31
    • Related Report
      2015 Research-status Report
  • [Presentation] 外来小児科におけるロタウイルス検出の減少と同ウイルスの分子疫学.2015

    • Author(s)
      高梨さやか、Thongprachum Aksara、沖津祥子、早川智、牛島廣治.
    • Organizer
      第56回日本臨床ウイルス学会
    • Place of Presentation
      岡山大学鹿田 キャンパス(岡山県岡山市)
    • Year and Date
      2015-06-12
    • Related Report
      2015 Research-status Report
  • [Presentation] ノロウイルス胃腸炎を繰り返す1成人例の臨床的、ウイルス学的、免疫学的検討2015

    • Author(s)
      牛島廣治 Thongprachum A, Khamrin P, 野村明子、高梨さやか、沖津祥子、早川智.
    • Organizer
      第56回日本臨床ウイルス学会
    • Place of Presentation
      岡山大学鹿田 キャンパス(岡山県岡山市)
    • Year and Date
      2015-06-12
    • Related Report
      2015 Research-status Report
  • [Presentation] Molecular epidemiology of circulating rotavirus in hospitalized acute gastroenteritis children, in North Sulawesi, Indonesia.2014

    • Author(s)
      Angela Kalesaran、Aksara Thongprachum、高梨さやか、沖津祥子、早川智、牛島廣治.
    • Organizer
      第62回日本ウイルス学会学術集会
    • Place of Presentation
      パシフィコ横浜 会議センター (神奈川県横浜市)
    • Year and Date
      2014-11-10 – 2014-11-12
    • Related Report
      2014 Research-status Report
  • [Presentation] Circulating rotavirus in hospitalized pediatric patients, with the predominance of G1P[8]DS-1-like human rotavirus in Manado, Indonesia.2014

    • Author(s)
      Kalesaran AFC, Thongprachum A, Pangemanan DHC, Takanashi S, Okitsu S, Hayakawa S, Warouw SM, Mizuguchi M, Ushijima H.
    • Organizer
      International Meeting on Emerging Diseases and Suiveillance 2014
    • Place of Presentation
      Hilton Vienna (オーストリア、ウイーン市)
    • Year and Date
      2014-10-31 – 2014-11-03
    • Related Report
      2014 Research-status Report
  • [Remarks] 東京大学大学院医学系研究科発達医科学教室

    • URL

      http://www.development.m.u-tokyo.ac.jp/

    • Related Report
      2016 Annual Research Report

URL: 

Published: 2014-04-04   Modified: 2022-02-16  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi