The investigation of genetic polymorphisms in viral-sensing pathway affecting development of diseases caused by hepatitis viruses.
Project/Area Number |
26860536
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Research Category |
Grant-in-Aid for Young Scientists (B)
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Allocation Type | Multi-year Fund |
Research Field |
Gastroenterology
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Research Institution | Institute of Physical and Chemical Research |
Principal Investigator |
MIKI Daiki 国立研究開発法人理化学研究所, 統合生命医科学研究センター, 副チームリーダー (10584592)
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Project Period (FY) |
2014-04-01 – 2017-03-31
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Project Status |
Completed (Fiscal Year 2016)
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Budget Amount *help |
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
|
Keywords | SNP |
Outline of Final Research Achievements |
There are distinct mechanisms for viral sensing in the early phase of infection with hepatitis B virus (HBV) and hepatitis C virus (HCV). The former is DNA virus and the latter is RNA virus. In this study, we investigated genetic polymorphisms in viral sensing pathway affecting development of diseases caused by hepatitis viruses. NTCP was recently identified as a hepatocyte receptor for HBV. It has been reported that the amino acid substitution S267F, which corresponds to a single nucleotide polymorphism (SNP) rs2296651, of NTCP is defective in HBV receptor function. However, we found that the SNP is rare and could not find any genetic association between the SNP and HBV persistence nor development of HBV-induced HCC in Japanese population. We also investigated polymorphism of viral RNA sensor RIG-I, and found a supportive data for the theory that RIG-I functions not only as a RNA sensor but as a DNA sensor.
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Report
(4 results)
Research Products
(44 results)
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[Journal Article] Efficacy and safety of daclatasvir plus asunaprevir therapy for chronic hepatitis C patients with renal dysfunction.2017
Author(s)
Nakamura Y, Imamura M, Kawakami Y, Teraoka Y, Daijo K, Honda F, Morio K, Kobayashi T, Nakahara T, Nagaoki Y, Kawaoka T, Tsuge M, Hiramatsu A, Aikata H, Hayes CN, Miki D, Ochi H, Chayama K.
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Journal Title
J Med Virol.
Volume: 89
Issue: 4
Pages: 665-671
DOI
Related Report
Peer Reviewed
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[Journal Article] Safety and efficacy of dual therapy with daclatasvir and asunaprevir for older patients with chronic hepatitis C.2017
Author(s)
Morio R, Imamura M, Kawakami Y, Morio K, Kobayashi T, Yokoyama S, Kimura Y, Nagaoki Y, Kawaoka T, Tsuge M, Hiramatsu A, Nelson Hayes C, Aikata H, Takahashi S, Miki D, Ochi H, Mori N, Takaki S, Tsuji K, Chayama K.
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Journal Title
J Gastroenterol.
Volume: 52
Issue: 4
Pages: 504-511
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] Real-world efficacy and safety of daclatasvir and asunaprevir therapy for hepatitis C virus-infected cirrhosis patients.2017
Author(s)
Morio K, Imamura M, Kawakami Y, Morio R, Kobayashi T, Yokoyama S, Nagaoki Y, Kawaoka T, Tsuge M, Hiramatsu A, Makokha GN, Hayes CN, Aikata H, Miki D, Ochi H, Honda Y, Mori N, Takaki S, Tsuji K, Chayama K.
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Journal Title
J Gastroenterol Hepatol.
Volume: 32
Issue: 3
Pages: 645-650
DOI
Related Report
Peer Reviewed
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[Journal Article] IFNL4 polymorphism effects on outcome of simeprevir, peginterferon, and ribavirin therapy for older patients with genotype 1 chronic hepatitis C.2017
Author(s)
Mori N, Imamura M, Kawakami Y, Nagaoki Y, Kawaoka T, Tsuge M, Hiramatsu A, Hayes CN, Aikata H, Miki D, Ochi H, Honda Y, Takaki S, Tsuji K, Chayama K; Hiroshima Liver Study Group.
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Journal Title
Hepatol Res.
Volume: 47
Issue: 3
DOI
Related Report
Peer Reviewed
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[Journal Article] Association between variants in the interferon lambda 4 locus and substitutions in the hepatitis C virus non-structural protein 5A.2015
Author(s)
Akamatsu S, Hayes CN, Ochi H, Uchida T, Kan H, Murakami E, Abe H, Tsuge M, Miki D, Akiyama R, Hiraga N, Imamura M, Aikata H, Kawaoka T, Kawakami Y, Chayama K.
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Journal Title
J Hepatol.
Volume: 63
Issue: 3
Pages: 554-563
DOI
Related Report
Peer Reviewed / Acknowledgement Compliant
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[Journal Article] Rapid, Sensitive, and Accurate Evaluation of Drug Resistant Mutant (NS5A-Y93H) Strain Frequency in Genotype 1b HCV by Invader Assay2015
Author(s)
Satoshi Yoshimi, Hidenori Ochi, Eisuke Murakami, Takuro Uchida, Hiromi Kan, Sakura Akamatsu, C. Nelson Hayes, Hiromi Abe, Daiki Miki, Nobuhiko Hiraga, Michio Imamura, Hiroshi Aikata, Kazuaki Chayama.
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Journal Title
PLOS ONE
Volume: 10
Issue: 6
Pages: e0130022-e0130022
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] Circulating tumor DNA analysis for liver cancers and its usefulness as a liquid biopsy.2015
Author(s)
Ono A, Fujimoto A, Yamamoto Y, Akamatsu S, Nobuhiko H, Imamura M, Kawaoka T, Tsuge M, Abe H, Hayes CN, Miki D, Furuta M, Tsunoda T, Miyano S, Kubo M, Aikata H, Ochi H, Kawakami Y, Arihiro K, Ohdan H, Nakagawa H, Chayama K
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Journal Title
Cellular and Molecular Gastroenterology and Hepatology
Volume: 1
Issue: 5
Pages: 516-534
DOI
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] Differences in serum microRNA profiles in hepatitis B and C virus infection.2015
Author(s)
Akamatsu S, Hayes CN, Tsuge M, Miki D, Akiyama R, Abe H, Ochi H, Hiraga N, Imamura M, Takahashi S, Aikata H, Kawaoka T, Kawakami Y, Ohishi W, Chayama K.
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Journal Title
J Infect.
Volume: 70
Issue: 3
Pages: 273-287
DOI
Related Report
Peer Reviewed
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[Journal Article] The effects of bisphosphonate zoledronic acid in hepatocellular carcinoma, depending on mevalonate pathway.2015
Author(s)
Honda Y, Takahashi S, Zhang Y, Ono A, Murakami E, Shi N, Kawaoka T, Miki D, Tsuge M, Hiraga N, Abe H, Ochi H, Imamura M, Aikata H, Chayama K.
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Journal Title
J Gastroenterol Hepatol.
Volume: 30
Issue: 3
Pages: 619-627
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] Emergence of resistant variants detected by ultra-deep sequencing after asunaprevir and daclatasvir combination therapy in patients infected with hepatitis C virus genotype 1.2014
Author(s)
Kosaka K, Imamura M, Hayes CN, Abe H, Hiraga N, Yoshimi S, Murakami E, Kawaoka T, Tsuge M, Aikata H, Miki D, Ochi H, Matsui H, Kanai A, Inaba T, Chayama K.
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Journal Title
J Viral Hepat.
Volume: 22
Issue: 2
Pages: 158-165
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] Ultradeep sequencing study of chronic hepatitis C virus genotype 1 infection in patients treated with daclatasvir, peginterferon, and ribavirin2014
Author(s)
Murakami, E. Imamura, M. Hayes, C. N. Abe, H. Hiraga, N. Honda, Y. Ono, A. Kosaka, K. Kawaoka, T. Tsuge, M. Aikata, H. Takahashi, S. Miki, D. Ochi, H. Matsui, H. Kanai, A. Inaba, T. McPhee, F. Chayama, K.
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Journal Title
Antimicrob Agents Chemother
Volume: 58
Issue: 4
Pages: 2105-2112
DOI
Related Report
Peer Reviewed / Open Access
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[Presentation] Japanese genetic study could not suggest the importance of the NTCP locus for HBV persistence.2016
Author(s)
Miki D, Ochi H, Hayes CN, Abe H, Akamatsu S, Ono A, Nakahara T, Zhang Y, Masaki K, Fujino H, Miyaki E, Kan H, Uchida T, Hiraga N, Tsuge M, Kawaoka T, Imamura M, Kawakami Y, Aikata H, Chayama K.
Organizer
The 25th Conference of the Asian Pacific Association for the Study of the Liver (APASL2016).
Place of Presentation
Tokyo, Japan.
Year and Date
2016-02-22
Related Report
Int'l Joint Research
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[Presentation] The relationship between hepatocellular carcinoma development and reduced expression levels of the major germline genotype of PROSC, which is frequently deleted in hepatocellular carcinoma.2015
Author(s)
Miki D, Ochi H, Hayes CN, Abe H, Akamatsu S, Ono A, Nakahara T, Zhang Y, Masaki K, Fujino H, Miyaki E, Kan H, Uchida T, Hiraga N, Tsuge M, Kawaoka T, Imamura M, Kawakami Y, Aikata H, Chayama K.
Organizer
The Liver Meeting 2015.
Place of Presentation
San Francisco, USA.
Year and Date
2015-11-17
Related Report
Int'l Joint Research
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[Presentation] Rapid, sensitive, and accurate evaluation system for drug resistant strain (NS5A-Y93H) frequency in genotype 1b HCV.2015
Author(s)
Ochi H, Yoshimi S, Murakami E, Uchida T, Kan H, Akamatsu S, Hayes CN, Abe H, Miki D, Hiraga N, Imamura M, Aikata H, Chayama K.
Organizer
The Liver Meeting 2015.
Place of Presentation
San Francisco, USA.
Year and Date
2015-11-17
Related Report
Int'l Joint Research
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[Presentation] Circulating tumor DNA analysis for liver cancers and its usefulness as a liquid biopsy.2015
Author(s)
Ono A, Hayes CN, Uchida T, Kan H, Masaki K, Nakahara T, Miki D, Kawaoka T, Tsuge M, Hiraga N, Imamura M, Kawakami Y, Aikata H, Ochi H, Abe H, Nakagawa H, Chayama K.
Organizer
The Liver Meeting 2015.
Place of Presentation
San Francisco, USA.
Year and Date
2015-11-17
Related Report
Int'l Joint Research
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[Presentation] Genetic association study failed to confirm an association between the NTCP S267F mutation and persistence of hepatitis B virus or development of hepatocellular carcinoma in the Japanese population.2015
Author(s)
Miki D, Ochi H, Hayes CN, Abe H, Akamatsu S, Ono A, Nakahara T, Zhang Y, Masaki K, Fujino H, Miyaki E, Kan H, Uchida T, Hiraga N, Tsuge M, Kawaoka T, Imamura M, Kawakami Y, Aikata H, Chayama K.
Organizer
The Liver Meeting 2015.
Place of Presentation
San Francisco, USA.
Year and Date
2015-11-16
Related Report
Int'l Joint Research
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[Presentation] Genome-wide scan of miRNA polymorphisms revealed a suggestive association of miR-3143 with chronic hepatitis B virus infection.2015
Author(s)
Miki D, Ochi H, Hayes CN, Abe H, Akamatsu S, Ono A, Nakahara T, Zhang Y, Masaki K, Fujino H, Miyaki E, Kan H, Uchida T, Hiraga N, Tsuge M, Kawaoka T, Imamura M, Kawakami Y, Aikata H, Chayama K.
Organizer
The Liver Meeting 2015.
Place of Presentation
San Francisco, USA.
Year and Date
2015-11-16
Related Report
Int'l Joint Research
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[Presentation] The impact of HLA-DQs and IFNL4 variant on hepatitis C virus-induced liver inflammation.2015
Author(s)
Miki D, Ochi H, Hayes CN, Abe H, Akamatsu S, Ono A, Nakahara T, Zhang Y, Masaki K, Fujino H, Miyaki E, Kan H, Uchida T, Hiraga N, Tsuge M, Kawaoka T, Imamura M, Kawakami Y, Aikata H, Chayama K.
Organizer
The Liver Meeting 2015.
Place of Presentation
San Francisco, USA.
Year and Date
2015-11-15
Related Report
Int'l Joint Research
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[Presentation] The IL28B SNP has a stronger regulatory effect on the expression of OAS1 than a nearby SNP located downstream of OAS1 in chronic HCV patients.2014
Author(s)
Miki D, Abe H, Hayes CN, Ochi H, Kawaoka T, Akamatsu S, Ono A, Nakahara T, Seki N, Murakami E, Zhang Y, Uchida T, Honda Y, Masaki K, Kan H, Tsuge M, Hiraga N, Imamura M, Kawakami Y, Aikata H, Kubo M, Chayama K.
Organizer
The Liver Meeting 2014.
Place of Presentation
Boston, USA.
Year and Date
2014-11-11
Related Report
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[Presentation] Hepatitis B virus infection efficiency and immune response decreases with cell density in primary cultured hepatocytes.2014
Author(s)
Hayes CN, Abe H, Akamatsu S, Hiraga N, Imamura M, Tsuge M, Miki D, Aikata H, Ochi H, Ishida Y, Tateno C, Chayama K.
Organizer
The Liver Meeting 2014.
Place of Presentation
Boston, USA.
Year and Date
2014-11-11
Related Report
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[Presentation] Pretreatment induction of ISGs in the presence of IFNL4 in hepatocytes but not in white blood cells is related with poor induction of ISGs following IFN-α therapy.2014
Author(s)
Abe H, Hayes CN, Hiraga N, Imamura M, Tsuge M, Miki D, Aikata H, Ochi H, Ishida Y, Tateno C, Yoshizato K, Chayama K.
Organizer
The Liver Meeting 2014.
Place of Presentation
Boston, USA.
Year and Date
2014-11-11
Related Report
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[Presentation] Two microRNA polymorphisms are associated with hepatitis B virus-related but not hepatitis C virus-related hepatocellular carcinoma in the Japanese population.2014
Author(s)
Miki D, Ochi H, Hayes CN, Abe H, Kawaoka T, Ono A, Akamatsu S, Nakahara T, Seki N, Murakami E, Zhang Y, Uchida T, Honda Y, Masaki K, Kan H, Tsuge M, Hiraga N, Imamura M, Kawakami Y, Aikata H, Kubo M, Chayama K.
Organizer
The Liver Meeting 2014.
Place of Presentation
Boston, USA.
Year and Date
2014-11-09
Related Report
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[Presentation] Germline variants of highly point-mutated genes in hepatocellular carcinoma do not have strong effects on HCV-related hepatocarcinogenesis.2014
Author(s)
Miki D, Ochi H, Hayes CN, Ono A, Akamatsu S, Y. Urabe, Masaki K, Abe H, Kawaoka T, Nakahara T, Seki N, Murakami E, Zhang Y, Uchida T, Honda Y, Kan H, Tsuge M, Hiraga N, Imamura M, Kawakami Y, Aikata H, Kubo M, Chayama K.
Organizer
The Liver Meeting 2014.
Place of Presentation
Boston, USA.
Year and Date
2014-11-09
Related Report
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