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Exploratory study to identify genetic defects of type I/V hyperlipoproteinemia using Next-Generation Sequencing

Research Project

Project/Area Number 26860688
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Metabolomics
Research InstitutionThe University of Tokyo

Principal Investigator

Takase Satoru  東京大学, 医学部附属病院, 助教 (80508094)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordshypertriglyceridemia / APOC2 / whole genome sequencing / 原発性脂質異常症 / whole genome sequence
Outline of Final Research Achievements

Previously we reported a case of hypoapoC-II with severe hypertriglyceridemia (HTG) phenotype without any mutation in the coding region of the APOC2 gene (Case 1). Whole genome sequencing revealed a rearrangement around the APOC2 gene. Southern blot hybridization analysis, array CGH analysis, and breakpoint analysis supported the result. Other 2 cases of severe HTG with decreased levels of plasma apoC-II proteins were also analyzed (Case 2 and Case 3). Surprisingly, Case 2 showed the same result as Case 1 by array CGH analysis and breakpoint analysis, indicating they have the same rearrangements. We further genotyped tag SNPs of these 2 patients by microarray and detected a founder haplotype. We propose a new disease entity “hypoapoC-II” that is derived from a structural abnormality around APOC2 gene and results in massive HTG.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (3 results)

All 2014

All Presentation (3 results)

  • [Presentation] Molecular dissection of hypoapoC-II caused by defective apoC-II mRNA transcription2014

    • Author(s)
      Satoru Takase, Hiroyuki Ishiura, Jun Mitusi, Hayato Fujita, Kazuo Hara, Mikio Takanashi, Jun-ichi Osuga, Shun Ishibashi, Shoji Tsuji, Takashi Kadowaki and Hiroaki Okazaki
    • Organizer
      9th Metabolic Syndrome, type II Diabetes and Atherosclerosis congress
    • Place of Presentation
      Kyoto
    • Year and Date
      2014-09-12 – 2014-09-14
    • Related Report
      2014 Research-status Report
  • [Presentation] 全ゲノム解析を用いたapoC-II低下症の原因遺伝子の探索2014

    • Author(s)
      高瀬暁、石浦浩之、三井純、藤田逸人、原一雄、高梨幹生、飯塚陽子、吉田博、大須賀淳一、石橋俊、辻省次、門脇孝、岡崎啓明
    • Organizer
      第46回日本動脈硬化学会総会・学術集会
    • Place of Presentation
      東京
    • Year and Date
      2014-07-10 – 2014-07-11
    • Related Report
      2014 Research-status Report
  • [Presentation] whole genome sequence 解析を用いたapoC-II低下症の原因遺伝子変異同定の試み2014

    • Author(s)
      高瀬暁、石浦浩之、三井純、藤田逸人、原一雄、関谷元博、五十嵐正樹、高梨幹生、泉田欣彦、久保田みどり、升田紫、平美乃、岡崎佐智子、飯塚陽子、矢作直也、大橋健、吉田博、柳内秀勝、多田紀夫、後藤田貴也、大須賀淳一、石橋俊、辻省次、門脇孝、岡崎啓明
    • Organizer
      第57回日本糖尿病学会年次学術集会
    • Place of Presentation
      大阪
    • Year and Date
      2014-05-22 – 2014-05-24
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2017-05-10  

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