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Identification of novel diabetes susceptibility genes utilizing whole exome sequencing

Research Project

Project/Area Number 26860694
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Metabolomics
Research InstitutionKyoto University

Principal Investigator

Tanaka Daisuke  京都大学, 医学(系)研究科(研究院), 助教 (50582904)

Co-Investigator(Renkei-kenkyūsha) KOIZUMI Akio  京都大学, 大学院医学研究科, 教授 (50124574)
Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2015: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords糖尿病 / 全エクソンシーケンス / 次世代シークエンス
Outline of Final Research Achievements

The aim of this study was to investigate the genetic background of a family with multiple cases of diabetes using whole exome sequencing. Whole exome sequencing identified 439 non-synonymous variants present in all affected members and absent in unaffected members. After excluding common variants with minor allele frequency of >1% in SNP databases or in 105 Japanese normal controls, 16 candidate variants were selected. Among them R608H mutation in the ARHGEF11 gene might be a mutation for susceptibility to diabetes because the ARHGEF11 gene has been implicated to be involved in glucose metabolism in genetic association studies.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (5 results)

All 2015 2014

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (4 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] Glycemic variability is associated with quality of life and treatment satisfaction in patients with type 1 diabetes.2015

    • Author(s)
      17.Ayano-Takahara S, Ikeda K, Fujimoto S, Hamasaki A, Harashima S, Toyoda K, Fujita Y, Nagashima K, Tanaka D, Inagaki N.
    • Journal Title

      Diabetes Care

      Volume: 38(1) Issue: 1 Pages: 1-1

    • DOI

      10.2337/dc14-1801

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] Whole Exome Sequencing in a Family with Multiple Cases of Type 1 Diabetes Reveals a Candidate Susceptibility Mutation2015

    • Author(s)
      Byambatseren Jambaljav, Daisuke Tanaka, Kazuaki Nagashima, Norio Harada, and Nobuya Inagaki
    • Organizer
      The American Diabetes Association's 75th Scientific Sessions
    • Place of Presentation
      ボストン
    • Year and Date
      2015-06-08
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Whole Exome Sequencing in a Family with Multiple Cases of Type 1 Diabetes Reveals a Candidate Susceptibility Mutation2015

    • Author(s)
      Byambatseren Jambaljav, Daisuke Tanaka, Kazuaki Nagashima, Norio Harada, and Nobuya Inagaki
    • Organizer
      The American Diabetes Association’s 75th Scientific Sessions
    • Place of Presentation
      Boston
    • Year and Date
      2015-06-08
    • Related Report
      2014 Research-status Report
  • [Presentation] 1型糖尿病多発家系における、次世代シーケンスを用いた発症原因遺伝子変異同定の試み2015

    • Author(s)
      田中大祐 Byambatseren Jambaljav 長嶋一昭 原田範雄 小泉昭夫 稲垣暢也
    • Organizer
      第58回日本糖尿病学会年次学術集会
    • Place of Presentation
      下関
    • Year and Date
      2015-05-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] Whole Exome Sequencing in a Japanese Family with Highly Aggregated Type 2 Diabetes Identifies a Candidate Susceptibility Variant2014

    • Author(s)
      Daisuke Tanaka, Kazuaki Nagashima, Shin-ichi Harashima, and Nobuya Inagaki
    • Organizer
      The American Diabetes Association’s 74th Scientific Sessions
    • Place of Presentation
      San Francisco
    • Year and Date
      2014-06-16
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2017-05-10  

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