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Mechanism of extracapsular invasion of oral cancer lymph node metastasis by whole genome copy number analysis

Research Project

Project/Area Number 26861704
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Surgical dentistry
Research InstitutionTokyo Medical and Dental University

Principal Investigator

Sumino Jun  東京医科歯科大学, 歯学部附属病院, 医員 (30634109)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥130,000 (Direct Cost: ¥100,000、Indirect Cost: ¥30,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Keywords口腔癌 / 原発巣 / 頸部リンパ節転移 / 被膜外浸潤 / FFPE / OncoScan / 全ゲノムコピー数 / リンパ節転移 / 全ゲノムコピー解析 / ECS陽性 / 全ゲノムコピー数解析
Outline of Final Research Achievements

Among oral carcinoma cases, those who developed cervical lymph node metastasis were divided into ECS positive and negative groups. Genomic DNA was extracted from the primary FFPE sample of the target case and the whole genome copy analysis was performed by using OncoScan FFPE assay. With this SNP array, chromosomal regions showing increase, decrease and LOH of copy number in each sample were identified. By comparing and examining between ECS positive group and negative group, identification of copy number variation specific to ECS positive group was carried out. The distribution of CAN was different between the ECS positive group and the negative group.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (3 results)

All 2017 2016 2015

All Journal Article (3 results) (of which Peer Reviewed: 2 results,  Acknowledgement Compliant: 1 results)

  • [Journal Article] First signs of late-presenting cervical lymph node metastasis in oral cancers during follow-up2017

    • Author(s)
      Sumino J, Uzawa N, Ohyama Y, Michi Y, Kawamata A, Mizutani M, Yamashiro M
    • Journal Title

      IJOMS

      Volume: 6 Issue: 6 Pages: 676-681

    • DOI

      10.1016/j.ijom.2017.02.006

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Characterizing Genetic Transitions of Copy Number Alterations and Allelic Imbalances in Oral Tongue Carcinoma Metastasis2016

    • Author(s)
      Morita T, Uzawa N, Mogushi K, Sumino J, Michikawa C, Takahashi KI, Myo K, Izumo T, Harada K
    • Journal Title

      Genes Chromosomes Cancer

      Volume: 55 Issue: 12 Pages: 975-986

    • DOI

      10.1002/gcc.22395

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 智歯の抜去を行ったGitelman症候群の1例2015

    • Author(s)
      炭野淳,佐藤豊,稲葉好則,鵜澤成一 ,原田清
    • Journal Title

      日本口腔外科学会

      Volume: 未定

    • NAID

      130005105659

    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2018-03-22  

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