• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Elucidation of the flexible structure-function relationship of the potassium channel KcsA using high resolution microscopy

Research Project

Project/Area Number 26870233
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biological physics/Chemical physics/Soft matter physics
Biophysics
Research InstitutionUniversity of Fukui

Principal Investigator

Sumino Ayumi  福井大学, 医学部, 特別研究員 (80717140)

Research Collaborator Uchihashi Takayuki  金沢大学, 数物科学系, 教授 (30326300)
Ulf Skoglund  沖縄科学技術大学院大学, 構造細胞生物学ユニット, 教授
Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2015: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2014: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Keywords生体膜 / 受容体 / チャンネル / 原子間力顕微鏡 / カリウムチャネル / KcsA / 構造変化 / 電子線トモグラフィー
Outline of Final Research Achievements

Structure of pH-dependent potassium channel KcsA is roughly divided into transmembrane and cytoplasmic domains. The high resolution structure of the transmembrane domains have been revealed by the crystal structure, but the high resolution structure of the cytoplasmic domain is unknown. In this study, we aimed to elucidate the structure of the cytoplasmic domain of KcsA channel in water and non-crystalline state. Atomic force microscopy revealed that, the cytoplasmic domain of KcsA channel were fluctuating at a high speed. The result indicates that the cytoplasmic domain of KcsA does not take a hard specific structure in water.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (7 results)

All 2015 2014

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (6 results) (of which Invited: 1 results)

  • [Journal Article] Structure and Dynamics of Membrane-embedded KcsA Potassium Channel Revealed by Atomic Force Microscopy2015

    • Author(s)
      角野歩、山本大輔、炭竃享司、岩本真幸、出羽毅久、老木成稔
    • Journal Title

      Seibutsu Butsuri

      Volume: 55 Issue: 1 Pages: 005-010

    • DOI

      10.2142/biophys.55.005

    • NAID

      130004794734

    • ISSN
      0582-4052, 1347-4219
    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 高速原子間力顕微鏡で見るカリウムチャネルKcsAの動的挙動2015

    • Author(s)
      Ayumi Sumino, Takayuki Uchihashi, Daisuke Yamamoto, Masayuki Iwamoto, Takehisa Dewa, Shigetoshi Oiki
    • Organizer
      第92回日本生理学会大会
    • Place of Presentation
      神戸国際会議場
    • Year and Date
      2015-03-21
    • Related Report
      2014 Research-status Report
  • [Presentation] Gating-associated clustering–dispersion dynamics of the KcsA potassium channel in a lipid membrane: Direst observation using atomic force microscopy2014

    • Author(s)
      Sumino, Ayumi; Yamamoto, Daisuke; Iwamoto, Masayuki; Dewa, Takehisa; Oiki, Shigetoshi
    • Organizer
      The 45th NIPS Internaional Symposium, co-sponsored by The Journal of Physiology
    • Place of Presentation
      岡崎カンファレンスセンター
    • Year and Date
      2014-11-26 – 2014-11-28
    • Related Report
      2014 Research-status Report
  • [Presentation] カリウムチャネルKcsAのゲート開閉と連動した膜中集合・離散2014

    • Author(s)
      角野 歩、山本 大輔、岩本 真幸、出羽 毅久、老木 成稔
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-25
    • Related Report
      2014 Research-status Report
  • [Presentation] 原子間力顕微鏡による生体膜研究へのアプローチ2014

    • Author(s)
      角野 歩
    • Organizer
      アサイラムAFMセミナー「blueDrive フォトサーマル励振技術」
    • Place of Presentation
      AP大阪駅前梅田1丁目 B1F Eルーム
    • Year and Date
      2014-08-01
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] カリウムチャネルKcsAのゲート開閉と連動した膜中集合離散:原子間力顕微鏡で明らかになった集団的振る舞い2014

    • Author(s)
      角野 歩、山本 大輔、岩本 真幸、出羽 毅久、老木 成稔
    • Organizer
      第24回 バイオ・高分子シンポジウム
    • Place of Presentation
      東京工業大学大岡山キャンパス
    • Year and Date
      2014-07-14
    • Related Report
      2014 Research-status Report
  • [Presentation] Gating-associated clustering-dispersion behavior of the KcsA potassium channel in membrane: Direct observation by atomic force microscopy2014

    • Author(s)
      Sumino, Ayumi; Yamamoto, Daisuke; Iwamoto, Masayuki; Dewa, Takehisa; Oiki, Shigetoshi
    • Organizer
      Single Protein Dynamics in Cellulo 2014: Spatio-Temporal, Structural and Quantitative Analyses:
    • Place of Presentation
      沖縄科学技術大学院大学シーサイドハウス
    • Year and Date
      2014-04-10
    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2017-05-10  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi