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Phylogeny of 5S RNA and evolution of ribosomal components

Research Project

Project/Area Number 59400007
Research Category

Grant-in-Aid for General Scientific Research (A)

Allocation TypeSingle-year Grants
Research Field 広領域
Research InstitutionNagoya University

Principal Investigator

OSAWA Syozo  Nagoya University, 理学部, 教授 (10034620)

Co-Investigator(Kenkyū-buntansha) YAMAO Fumiaki  Nagoya University, 理学部, 助手 (10158074)
HORI Hiroshi  Nagoya University, 理学部, 助手 (60116663)
MUTO Akira  Nagoya University, 理学部, 助教授 (80034635)
Project Period (FY) 1984 – 1986
Project Status Completed (Fiscal Year 1986)
Budget Amount *help
¥20,500,000 (Direct Cost: ¥20,500,000)
Fiscal Year 1986: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1985: ¥7,000,000 (Direct Cost: ¥7,000,000)
Fiscal Year 1984: ¥12,000,000 (Direct Cost: ¥12,000,000)
KeywordsMycoplasma / Micrococcus / GC / AT pressure / Genetic code / Mutation pressure / UGA tryptophan codon / tRNA / Micrococcus / 5SRNA / 分子系統樹 / リボソームタンパク遺伝子 / マイコプラズマ / ゲノムのGC含量 / 終止コドン / トリプトファンコドン / 開始コドン
Research Abstract

1.Since 1984, we have been studying the phylogenic relationship among a wide spectrum of extant living organisms using 5S RNA sequences. By comparing more than 350 5S RNA sequences from widely separated organisms, we have constructed a phylogenetic tree to obtain information on the representative groups of organisms, such as eubacteria, plants, multicellular animals, etc.
2. We proposed a hypothesis for evolution of the genetic code, using conclusions based on experimental observations. We emphasize wobble rules, evolution of anticodons and of transfer RNA, especially through gene duplication, AT/GC pressure in DNA (mutation pressure), observed differences from the universal code in mitochondria, Mycoplasma (UGA : tryptophan codon), and ciliated protozoa, and phylogenetic separation of kingdoms of organisms deduced from the 5S RNA sequences.
Consideration of these and other observations including codon usages in ribosomal proteins in Micrococcus and Mycoplasma done in our laboratory enables a coherent scheme for evolution of the code, following the first establishment of a code for 20 amino acids, to be formulated.

Report

(2 results)
  • 1986 Final Research Report Summary
  • 1985 Annual Research Report
  • Research Products

    (16 results)

All Other

All Publications (16 results)

  • [Publications] Hori,H.;Lim,B.-L.;Osawa,S.: Proc.Natl.Acad.Sci.USA,. 82. 820-82 (1985)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Yamao,F.;Muto,A;Kawauchi,Y;Iwami,M.;Iwagami,S.;Azumi,Y.;Osawa,S.: Proc.Natl.Acad.Sci.USA,. 82. 2306-2309 (1985)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Lim,B.-L.;Kawai,H.;Hori,H.;Osawa,S.: Jpn.J.Genet.61. 169-176 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Muto.A.;Osawa,S.: Proc.Natl.Acad.Sci.USA,. 28. (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Hori,H.;Osawa,S.: Bio Systems,. 19. 163-172 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Hori,H.;Osawa,S.: Molec.Biol.& Evolution. (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Hori, H. et al.: "Evolution of green plants as deduced from 5S rRNA sequences" Proc. Natl. Acad. Sci. USA. 82. 820-823 (1985)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Yamao, F. et al.: "UGA is read as tryptophan in Mycoplasma capricolum" Proc. Natl. Acad. Sci. USA. 82. 2306-2309 (1985)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Lim, B-L., et al.: "Molecular evolution of 5S ribosomal RNA from red and brown algae" Japanese J. Genet.61. 169-176 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Muto, A., et al.: "The guanine and cytosine content of genomic DNA and bacterial evolution" Proc. Natl. Acad. Sci. USA. 83. (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Hori, H. et al.: "Evolutionary change in 5S rRNA secondary structure and a phylogeneic tree of 352 5S rRNA species" BioSystems. 19. 163-172 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1986 Final Research Report Summary
  • [Publications] Proceedings of National Academy of Sciences USA. 82-3. (1985)

    • Related Report
      1985 Annual Research Report
  • [Publications] Proceedings of National Academy of Sciences USA. 82-8. (1985)

    • Related Report
      1985 Annual Research Report
  • [Publications] Proceedings of Japan Academy,Ser.B. 61-1. (1985)

    • Related Report
      1985 Annual Research Report
  • [Publications] "Genetic Polymorphism and Molecular Evolution" .369-384 (1985)

    • Related Report
      1985 Annual Research Report
  • [Publications] "Genetic Polymorphism and Molecular Evolution" 407-414 (1985)

    • Related Report
      1985 Annual Research Report

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Published: 1987-03-31   Modified: 2016-04-21  

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