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Structure Prediction of Intrinsic Membrane Proteins

Research Project

Project/Area Number 61460248
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 生物物性学
Research InstitutionTokyo University of Agriculture and Technology

Principal Investigator

MITAKU Shigeki  Tokyo University of Agriculture and Technology Associate Professor, 工学部, 助教授 (10107542)

Project Period (FY) 1986 – 1988
Project Status Completed (Fiscal Year 1988)
Budget Amount *help
¥4,500,000 (Direct Cost: ¥4,500,000)
Fiscal Year 1988: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 1987: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 1986: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsBiological membrane / Membrane protein / Protein structure / Structure Prediction / Denaturation / Hydrophobic Interaction / 水素結合
Research Abstract

Membrane proteins have many important biological functions. However, their structure is hardly known. Therefore, the aim of this research project is to clarify the mechanism of structure formation of membrane proteins and to devise a method for the structure prediction. The results of this research may be summarized as follows. (1) The comparison between the amino acid sequences of soluble and membrane proteins revealed that the information of hydrophobicicity is enough for the distinction between the two types of proteins. (2) Transmembrane helices is bound with each other by hydrogen bonds, as inferred from denaturation experiments. Namely, spectroscopic measurements showed that alcohols destroyed the tertiary structure of bacteriorhodopsin, a typical membrane protein, and that hydrogen bonds were specifically destroyed. (3) The distribution of hydrogen bonding residues in the amino acid sequences of membrane proteins having seven transmembrane helices was compatible with the hydrogen bonding mechanism of the tertiary structure formation. Consequently, the principle of the structure prediction of membrane proteins has become clear by this research project.

Report

(4 results)
  • 1988 Annual Research Report   Final Research Report Summary
  • 1987 Annual Research Report
  • 1986 Annual Research Report
  • Research Products

    (35 results)

All Other

All Publications (35 results)

  • [Publications] N.Yanagihara;M.Suwa;S.Mitaku: Biophys.Chem.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S.Mitaku;K.Ikuta;H.Itoh,et.al.: Biophys.Chem.30. 69-79 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] 美宅成樹: 生物物理学会誌. 28. 317-322 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] 美宅成樹: 生化学. 60. 1267-1271 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S.Mitsku;T.Sakka;T.Hotta: Japan.J.Appl.Phys.27ー1. 44-46 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] 美宅成樹: 化学と生物. 25. 820-823 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] 美宅成樹: "生体膜複合体と合成膜の機能デザイン 第5章 膜結合性タンパク質の高次構造予測と機能デザイン" 学会出版センター, (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] 美宅成樹,幾田一哉,柳原憲那,諏訪牧子: "蛋白質核酸酵素増刊号「視覚の分子メカニズム」「膜タンパク質における立体構造の予測法」" 共立出版,

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] N. Yanagihara; M. Suwa; S. Mitaku: "A Theoretical Method of Distingishing Between Soluble and Membrane Proteins" Biophys. Chem.accepted.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S. Mitaku; K. Ikuta; H. Itoh; et.al.: "Denaturation of Bacteriorhodopsin by Organic Solvents" Biophys. Chem.30. 69-79 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Shigeki MITAKU: "Stability of Proteins. The Comparison between Soluble and Membrane Proteins [in japanese]" Seibutsubutsuri (Journal of The Biophysical Society of Japan). 28. 317-322 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Shigeki MITAKU: "Amino Acid Sequence Analysis of Membrane Proteins [in Japanese]" Seikagaku (Journal of The Biochemical Society of Japan). 60. 1267-1271 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S. Mitaku; T. Sakka; T. Hotta: "Ultrasonic Measurement of Melittin-Liposome System" Japan. J. Appl. Phys.27-1. 44-46 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Shigeki MITAKU: Function Design of Biomembrane Complexes and Synthetic Membranes Volume 2 [in Japanese]. Gakkaishuppan Center, Tokyo, 200 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] N.Yanagihara;M.Suwa;S.Mitaku: Biophys.Chem.

    • Related Report
      1988 Annual Research Report
  • [Publications] S.Mitaku;K.Ikuta;H.Itoh;et.al.: Biophys.Chem.30. 69-79 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] 美宅成樹: 生物物理学会誌. 28. 317-322 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] 美宅成樹: 生化学. 60. 1267-1271 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] S.Mitaku;T.Sakka;T.Hotta: Japan.J.Appl.Phys.27-1. 44-46 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] 美宅成樹: 化学と生物. 25. 820-823 (1987)

    • Related Report
      1988 Annual Research Report
  • [Publications] 美宅成樹: "生体膜複合体と合成膜の機能デザイン 第5章 膜結合生タンパク質の高次構造予測と機能デザイン" 学会出版センター, 1987

    • Related Report
      1988 Annual Research Report
  • [Publications] 美宅成樹、幾田一哉、柳原憲那、諏訪牧子: "蛋白質核酸酵素増刊号「視覚の分子メカニズム」「膜タンパク質における立体構造の予測法」" 共立出版,

    • Related Report
      1988 Annual Research Report
  • [Publications] Norikuni YANAGIHARA;Makiko SUWA;Shigeki MITAKU: Repts.Progr.Polymer Phys.Japan. 30. 719-720 (1987)

    • Related Report
      1987 Annual Research Report
  • [Publications] Kazuya IKUTA;Shigeki MITAKU: Repts.Progr.Polymer Phys.Japan. 30. 723-724 (1987)

    • Related Report
      1987 Annual Research Report
  • [Publications] Makiko SUWA;Shigeki MITAKU: Repts.Progr.Polymer Phys.Japan. 30. 725-726 (1987)

    • Related Report
      1987 Annual Research Report
  • [Publications] Toshiaki SAKKA;Shigeki MITAKU: Japan.J.Appl.Phys.26-1. 64-66 (1987)

    • Related Report
      1987 Annual Research Report
  • [Publications] Shigeki MITAKU;Toshiaki SAKKA;Tohgo HOTTA: Japan.J.Appl.Phys.27-1. (1988)

    • Related Report
      1987 Annual Research Report
  • [Publications] 宮野健次郎;末高洽;大谷弘之;野沢庸則;美宅成樹;塩野悟;和田宇叶;今西幸男;国武豊喜: "バイオ・高分子研究の進歩-研究方法を中心として-,「生体膜複合体と合成膜の機能デザイン」" 学会出版センター, (1988)

    • Related Report
      1987 Annual Research Report
  • [Publications] 池上明他: "生命科学の基礎6「生体膜の分子素子・分子機械」" 学会出版センター, (1988)

    • Related Report
      1987 Annual Research Report
  • [Publications] Toshi KAGAYAMA: Japan.J.Appl.Phys.25-1. 61-63 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] Shigeki MITAKU: Rept.Progr.Polymer Phys.Japan. 29. 737-738 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] Shigeki MITAKU: Rept.Progr.Polymer.Phys.Japan. 29. 793-740 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] 美宅成樹: パリティ. 2-3. 26-36 (1987)

    • Related Report
      1986 Annual Research Report
  • [Publications] Toshiaki SAKKA: Japan.J.Appl.Phys. 26-1. (1987)

    • Related Report
      1986 Annual Research Report
  • [Publications] 美宅成樹: "バイオ.高分子研究の進歩 第2巻 「生体膜複合体と合成膜の機能デザイン」" 学会出版センター, 200 (1987)

    • Related Report
      1986 Annual Research Report

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Published: 1987-03-31   Modified: 2016-04-21  

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