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Chemical Synthesis of RNAs Containing Lariat Structure

Research Project

Project/Area Number 61470031
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 天然物有機化学
Research InstitutionTokyo Institute of Technology

Principal Investigator

HATA Tsujiaki  The Graduate School at Natatsuta. T.I.T. Professor, 大学院総合理工学研究所, 教授 (00016049)

Co-Investigator(Kenkyū-buntansha) SEKINE Mitsuo  The Graduate School at Nagatsuta. T.I.T. Associate, 大学院総合理工学研究所, 助手 (40111679)
Project Period (FY) 1986 – 1987
Project Status Completed (Fiscal Year 1987)
Budget Amount *help
¥6,000,000 (Direct Cost: ¥6,000,000)
Fiscal Year 1987: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1986: ¥4,500,000 (Direct Cost: ¥4,500,000)
KeywordsLariat Structure / Branched RNA / Phosphotriester Approach / Phosphorylation / RNAの化学合成
Research Abstract

In the aim to synthesize the lariat structure of RNA found in Splicing products In eukaryotic cells, chemical synthesis of a hexaribonucleotide CUGA^A_ involving the branched point of adenosine, was achieved throughout this study. For regioselective introduction of two different phosphoryl groups at the 2', and 3' positions, the first phosphorylation was done by the reaction of N^6-benzoly1-3',5'-O-(tetraisopropyldi- siloxane-1,3-diyl) adenosine with tris(diethylamino)phosphine in the presence of tetrazole followed by addition of aniline and subsequent oxidation with iodine. Fluoride ion-catalyzed desilylation of the resulting product gave a mixture of 2'- and 3'-(dianilino)phosphorylated species, from which the 3'-regioisomer was crystalized and used for the second phosphorylation after the 5'-tritylation. The bis(cyanoethoxy) phosphoryl group was chosen as the secong phosphoryl residue. The diphosphorylated unit thus obtained was used for chain elongation in the 2' and 3' direction by using selective removal of the phenylthio group or the cyanoethyl group. The subsequent detritylation followed by condensation with a timer block which had a phosphodiester residue at the 3'-terminus gave a fully protected CUGA^A_ sequence in good yield. Deprotection of all the protecting groups afforded the desired unprotgected branched hexamer of CUGA^A_ in 32% yield. The inhibitory effect of this synthetic branched RNA on splicing reaction was tested. Consequently, almost no inhibition was observed.

Report

(2 results)
  • 1987 Final Research Report Summary
  • 1986 Annual Research Report
  • Research Products

    (15 results)

All Other

All Publications (15 results)

  • [Publications] H. Tanimura;M. Sekine;T. Hara: Nucleosides & Nucleotides. 5. 363-383 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] M. Sekine;T. Hata: J. Am. Chem. Soc.108. 4581-4586 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] H. Tanimura;M. Sekine;T. Hata: Tetrahedron. 42. 4179-4186 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] T. Hata;M. Sekine;K. Miura: Nucleosides & Nucleotides. 6. 131-136 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] M. Sekine;J. Heikkila;T. Hata: Tetrahedron Lett.28. 5691-5694 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] H. Tanimura;T. Fukazawa;M. Sekine;T. Hata;J. N. Efcavitch;G. Zon: Tetrahedron Lett.29. 577-578 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] H,Tanimura, M,Sekine, and T,Hata: "Chemical Synthesis of RNA Fragments Related to the C4N Hypothesis." Nucleosides & Nucleotides. 5. 363-383 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] Tanimura,M. Sekine, and T,Hata: "Further Development of Oligoribonucleotide: Bis(tributyltin)oxide as a Reagent for Removal of the Internucleotidic Phenylthio Group via the Phosphotriester Approach." Tetrahedron. 42. 4179-4186 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] T,Tata, M,Sekine, and K,Miura: "The Chemistry of Eukaryotic Messenger RNA" Nucleosides & Nucleotides. 6. 131-136 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] M,Sekine, J,Heikkila, and T,Hata: "A New Method for the Synthesis of Branched Oligoribonucleotides Using a Fully Protected Branched Tritibonucleoside Diphosphate Unit." Tetrahedron Lett.28. 5691-5694 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] H,Tanimura, T,Fukazawa, M,Sekine, T,Hata, J,W,Efcavitch, and G,Zon: "The Practical Synthesis of RNA Fragments in the Solid Phase Approach." Tetrahedron Lett.29. 577-578 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] H.Tanimura: Nucleosides & Nucleotides. 5. 363-383 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] T.Hata: Chemica Scripta. 26. 73-75 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] H.Tanimura: Tetrahedron. 42. 4179-4186 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] T.Hata: Chemistry Letters. 117-120 (1987)

    • Related Report
      1986 Annual Research Report

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Published: 1987-03-31   Modified: 2016-04-21  

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