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Comparative studies on the molecular structure and reaction mechanisms of schiff base-dependent and nondependent deaminases for amino groups.

Research Project

Project/Area Number 61480460
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 物質生物化学
Research InstitutionKyoto University

Principal Investigator

TOKUSHIQE Masanobu  Kyoto University,Faculty of Science Professor, 理学部, 教授 (20025266)

Co-Investigator(Kenkyū-buntansha) NISHINO Tokuzo  Kyoto University, Faculty of Science Instructor, 理学部, 助手 (90005827)
Project Period (FY) 1986 – 1987
Project Status Completed (Fiscal Year 1987)
Budget Amount *help
¥6,000,000 (Direct Cost: ¥6,000,000)
Fiscal Year 1987: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1986: ¥4,000,000 (Direct Cost: ¥4,000,000)
KeywordsAspartase / fumarase / tryptophanase / Site-directed mutagenesis / Schiff base-dependent deamination / Schiff base-independent deamination / マイケル付加反応 / 酵素機能発現機構 / 酵素の機能変換 / 酵素の一次構造と活性部位構造 / シッフ塩基 / 脱アミノ酵素
Research Abstract

Comparative studies were carride out on the molecular structure and reaction mechanisms of tryptophanase, a Schiff-base-dependent enzyme, and aspartase, a Schiff base-nondependent enzyme, for amino group elimination and the following results were obtained.
I. Studies on tryptophanase:
1) Some monovalent cations such as K^+ and NH^+_ were found to convert the inactive holoenzyme into the active species and also to stabilize the latter species.
2) The Cys-298 was found to be essential for the above effects of the cations by means of the analysis with fluorescent probes.
3) In addition to the sulfhydryl groups, the methionyl residues were found to be also essential for the enzyme activity by chemical modification with chloramine-T.
II. Studies on aspartases.
1) Aspartase gene in Pseudomonas fluorescens cell was cell was cloned and the amino acid sequence was deduced from the base sequence.
2) Extensive homology was found in aspartases and fumarases by computer analysis.
3) Fumalaldehydic acid, a structural analog of the reaction intermediate, irreversibly inactivated aspartase form E. coli.
4) S-2, 3-Dicarboxyazairidine, an antibacterial agent isolated from the soil, competitively inhibited the activity of aspartase as well as fumarase.
5) Cys-430 in the E. coli aspartase was changed to tryptophan by the site-directed mutagenesis and the latter enzyme was characterized in comparison with the former enzyme.

Report

(2 results)
  • 1987 Final Research Report Summary
  • 1986 Annual Research Report
  • Research Products

    (18 results)

All Other

All Publications (18 results)

  • [Publications] J. S. Takagi, et al.: J. Biochem.100. 697-705 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] J. S. Takagi, et al.: Biochem. Biophys. Res. Commun.138. 568-572 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] T. Honda et al.: J. Biochem.100. 679-685 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] T. Honda et al.: J. Chromatography. 371. 353-360 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] M. Tokushige et al.: Biotechnology and applied biochemistry. 8. 522-528 (1986)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] 徳重正信: "酵素のはたらき" 東大出版会, 120 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] JS. Takagi et al.: "Cloning and nucleotide sequence of the aspartase gene of Pseudomonas fluorescens" J. Biochem.100. 697-705 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] J.S. Takagi et al.: "L-Aspartate ammonia-lyase and fumarate hydratase share extensive sequence homology" Biochem. Biophys. Res. Commun.138. 568-572 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] T. Honda et al.: "Effects of temperature and monovalent cations on activity and quaternary structure of tryptophanase" J. Biochem.100. 679-685 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] T. Hoda et al.: "Characterization of the reactivity of sulphydrly groups in trptophanase by a dual-monitoring high-performance liquid chromatographic system with a site-directed fluorescent reagent." J. Chromatograhy. 371. 353-360 (1986)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] Y. Higashi et al.: "Specific inhibition of aspartase by S-2, 3-dicarboxyaziridine" Biochem. Int.16. 449-452 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] M. Tokushige: University of Tokyo Press. Functions of Enzymes,

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] J.S.Takagi et al: Nucleic Acids Res. 13. 2063-2074 (1985)

    • Related Report
      1986 Annual Research Report
  • [Publications] J.S.Takagi et al: J.Biochem. 100. 697-705 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] J.S.Takagi et al: Biochem.Biophys.Res.Commun.138. 568-572 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] T.Honda et al: J.Biochem. 100. 679-685 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] T.Honda et al: J.Chromatography. 371. 353-360 (1986)

    • Related Report
      1986 Annual Research Report
  • [Publications] M.Tokushige et al: Biotechnology and Applied Biochemistry. 8. 522-528 (1986)

    • Related Report
      1986 Annual Research Report

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Published: 1987-03-31   Modified: 2016-04-21  

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