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Studies on the mechanisms of pre-mRNA splicing using synthetic oligonucleotides

Research Project

Project/Area Number 61480464
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 代謝生物化学
Research InstitutionKyushu University (1987)
University of Tsukuba (1986)

Principal Investigator

OHSHIMA Yasumi  Kyushu University, professor, 理学部, 教授 (90037606)

Co-Investigator(Kenkyū-buntansha) OHTSUKA Eiko  Hokkaido University, professor, 薬学部, 教授 (80028836)
Project Period (FY) 1986 – 1987
Project Status Completed (Fiscal Year 1987)
Budget Amount *help
¥6,000,000 (Direct Cost: ¥6,000,000)
Fiscal Year 1987: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1986: ¥4,000,000 (Direct Cost: ¥4,000,000)
Keywords2'-o-methylated oligonucleotides / Pre-mRNA splicing / Intron / Exon / Donor site / site / スキャニングモデル
Research Abstract

Seven kinds of 12mer 2'-o-methylated oligonucleotides were synthesized in the laboratory of E. Ohtsuka. Each of them are complementary to each of the seven portions in a pre-mRNA transcribed from the first exon-first inrton- second exon of human <beta>-globin gene. ANTIR-1 and 2 are complementary portions in the first exon. ANTIR-3 is complementary to the donor site. ANTIR-4 and 5 are complementary to portions within the intron. ANTIR-6 and 7 are complementary to portions of the second exon. The ^<32>P-labeled pre-mRNA was mixed with 1,000 fold excess of each of the oligos and incubated for hybridization. The mixbure was then tested for splicing activity in vitro using a HeLa cell nuclear extract. In a preliminary result, ANTIR-2 and 6 as well as 3 inhibited splicing of the pre-mRNA(mainly of the second step) while ANTIR-1, 4 and 5 did not. If the result is confirmed, it may be against a simple scanning model for splicing.

Report

(2 results)
  • 1987 Final Research Report Summary
  • 1986 Annual Research Report
  • Research Products

    (6 results)

All Other

All Publications (6 results)

  • [Publications] S. Iwai: Nucleic Acids Res.15. 3761-3772 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] H. Inoue: Nucleic Acids Res.15. 6131-6148 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] K. Tatei: J. Biol. Chem.262. 11667-11674 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] S. Iwai: "A new solid-phase synthesis of oligonucleotides by the phosphoro- p-anisidate method using tetrahydrofuranyl protection of 2'- hydroxyl groups." Nucleic Acids Res.15. 3671-3772 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] H. Inoue: "Synthesis and hybridization studies on two complementary nona (2'-o-methyl) ribonucleotides." Nucleic Acids Res.15. 6131-6148 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary
  • [Publications] K. Tatei: "Recognition of 5' and 3' splice site sequences in pre-mRNA studied with a filter binding technique." J. Biol. Chem.262. 11667-11674 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1987 Final Research Report Summary

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Published: 1987-03-31   Modified: 2016-04-21  

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