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Precise Conformational Analysis of Some Polypeptides in the solution and liquid crystalline states by multi-nuclear NMR

Research Project

Project/Area Number 62470091
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 高分子物性
Research InstitutionTokyo Institute of Technology

Principal Investigator

ANDO Isao  Tokyo Institute of Technology Polymer Chemistry Professor, 工学部, 教授 (20016637)

Co-Investigator(Kenkyū-buntansha) KOMOTO Tadashi  Gunma University Biochemical engineering Associate Professor, 工学部, 助教授 (00016643)
NAKAHAMA Seichi  Tokyo Institute of Technology Polymer Chemistry Professor, 工学部, 教授 (90016410)
Project Period (FY) 1987 – 1989
Project Status Completed (Fiscal Year 1989)
Budget Amount *help
¥6,300,000 (Direct Cost: ¥6,300,000)
Fiscal Year 1989: ¥300,000 (Direct Cost: ¥300,000)
Fiscal Year 1988: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1987: ¥5,000,000 (Direct Cost: ¥5,000,000)
Keywordspolypeptide / protein / NMR / conformation / liquid crystal / サ-モトロピック液晶 / 金属イオン輸送 / イオノホア / 固体高分解能NMR / NMR化学シフト / コンホメーション / ヘリックス / 水素結合 / 液晶 / サーモトロピック液晶 / 全属イオン輸送
Research Abstract

We have demonstrated that solid state ^<13>C and ^<15>N NMR chemical shift values become fundamental data for analyzing conformation of polypeptides in the solid state, solution state and liquid crystalline state. Using the fundamental data, the origin of the formation and no formation of thermotropic liquid crystals for polypeptides with long akyl side chains has been clarified using variable temperature high resolution NMR spectroscopy. Further, higher-order structure of proteins in solution has been determined on the basis of solid state ^<13>C and ^<15>N NMR chemical shift values.
The hydrogen bond plays an important role in forming the stable conformation of polypeptides and proteins. In order to investigate the effect of on the ^<13>C NMR chemical shifts of carbonyl carbons in peptides in the solid state, ^<13>C CP/ MAS NMR spectra were measured for a series of the oligopeptides containing glycine residues of which the crystal structures were already determined by X-ray diffraction We have found that the ^<13>C chemical shifts of the carbonyl carbon in the amide type hydrogen bond form move downfield with a decrease in the hydrogen bond length. This experimental finding is very useful to know the nature of hydrogen bond.
The relationship between the conformation and the biochemical function in biologically-related compounds such as ionophores has been successfully studied by ^<13>C-NMR spectroscopy.

Report

(4 results)
  • 1989 Annual Research Report   Final Research Report Summary
  • 1988 Annual Research Report
  • 1987 Annual Research Report
  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] Masao Okabe: "Conformational behavior of poly(-aspartate) with n-alkyl side chains in the solid state as studied by ^<13>C CP/MAS NMR spectroscopy" Journal of Molecular Structure. 213. 213-220 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] B.Mohanty: "Conformation aspect of poly( -oleyl L-glutamate) with long flexible side chains as studied by variable temperature ^<13>C CP/MAS NMR spectroscopy" Macromolecules. 22. 4451-4455 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Satoru Tuzi: "The structure and mobility of L-alanine residues of tropomyosin in the solid state ^<13>C NMR spectroscopy" Journal of Molecular Structure(印刷中).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Hidetoshi Miyamoto: "Side-chain conformation and ^<13>C NMR chemical shift of of poly(L-phenylalanine)and oligopeptides containing L-phenylalanine and tyrosine residues in the solid state" Journal of Molecular Structure(印刷中).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kazuo Yamaguchi: "Studies on synthetic ionophores VIII" Bull.Chem.Soc.Japan. 62. 1097-1101 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] T.Yamanobe, M.Tsukahara, T.Komoto, J.Watanabe, I.Ando, I.Uematsu, K.Deguchi, T.Fujito and M.Imanari: "Conformation and Dynamic Aspects of Poly(gamma-n-octadecyl L-glutamate) in the Solid State and Liquid-Crystalline State As Studied by Variable-Temperature ^<13>C CP/MAS NMR Spectroscopy" Macromolecules, 21, 48-50 (1988).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] S.Ando, I.Ando, A.Shoji and T.Ozaki: "Intermolecular Hydrogen-Bonding Effect on ^<13>C NMR Chemical Shifts of Glycine Residue Carbonyl Carbons of Peptides in the Solid State" J.Am.Chem.Soc., 110, 3380-3386 (1988).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] H.Miyamoto, R.Takazaki, T.Komoto and I.Ando: "Conformational Characterization of Poly(L-phenylalanine) in the Solid State by ^<13>C CP-MAS NMR Spectroscopy" J.Mol.Str., 172, 395-400 (1988).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] K.Kubo, T.Yamanobe, T.Komoto and I.Ando: "Nylon 6 Structure in Solid State as Studied by High-resolution ^<13>C-NMR Spectroscopy" J.Polym.Sci., Polym.Phys., 27, 929-937 (1989).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] A.Shoji, T.Ozaki, T.Fujito, K.Deguchi, S.Ando and I.Ando: "^<15>N NMR Chemical Shift Tensors and Conformation of Some ^<15>N-Labeled Polypeptides in the Solid State" Macromolecules, 22, 2860-2863 (1989).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] S.Ando, K.Matsumoto and I.Ando: "A Conformational Study of Oligopeptides Containing Gly-Pro Sequence in the Solid State by ^<13>C CP-MAS NMR" J.Mol.Str., 212, 123-135 (1989).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] S.Ando and I.Ando: "Conformational Characterization of Glycine Residues Incorporated into Some Homopolypeptides by Solid State ^<13>C NMR Spectroscopy. II" J.Mol.Str., 192, 153-161 (1989).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] S.Tuzi and I.Ando: "The ^<13>C-NMR Chemical Shift and the Higher Order Structure of L-alanine Residues in Tropomyosin in the Solid State and in Solution" J.Mol.Str., 196, 317-325 (1989).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] M.Okabe, T.Yamanobe, T.Komoto, J.Watanabe and I.Ando: "Conformational Behavior of Poly(beta-aspartate) with n-Alkyl Side Chains in the Solid State as Studied by ^<13>C-CP/MAS-NMR Spectroscopy" J.Mol.Str., 213, 213-220 (1989).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] B.Mohanty, T.Komoto, J.Watanabe, I.Ando and T.Shiibashi: "Conformation Aspect of Poly(gamma-oleyl L-glutamate) with Long Flexible Side Chains As Studied by Variable-Temperature ^<13>C CP/MAS NMR Spectroscopy" Macromolecules, 22, 4451-4455 (1989).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] S.Tuzi, S.Sakamaki and I.Ando: "The Structure and Mobility of L-alanine Residues of Tropomyosin in the Solid State as Studied by High Resolution Solid State ^<13>C NMR Spectroscopy" J.Mol.St.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Masao Okabe: "Conformational behavior of poly(-aspartate)with n-alkylside chains in the solid state as studied by 13C CP/MAS NMR spectroscopy" Journal of Molecular Structure. 213. 213-220 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] B.Mohanty: "Conformation aspect of poly(-oleyl L-glutamate)with long flexible side chains as studied by variable temperature 13C CP/MAS NMR spectroscopy" Macromolecules. 22. 4451-4455 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Satoru Tuzi: "The structure and mobility of L-alanine residues of tropomyosin in the solid state 13C NMR spectroscopy" Journal of Molecular Structure.

    • Related Report
      1989 Annual Research Report
  • [Publications] Hidetoshi Miyamoto: "Side-chain conformation and 13C NMR chemical shift of of poly(L-phenylalanine)and oligopeptides containing L-phenylalanine and tyrosine residues in the solid state" Journal of Molecular Structure.

    • Related Report
      1989 Annual Research Report
  • [Publications] Kazuo Yamaguchi: "Studies on synthetic ionophores VIII" Bull.Chem.Soc.Japan. 62. 1097-1101 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Shinji,Ando: J. Amer. Chem. Soc.110. 3380-3386 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Hidetoshi,Miyamoto: J. Mol. Structure. 172. 395-400 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Shinji,Ando: J. Mol. Structure. 192. 153-161 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] B.,Mohanty: Macromlecules. 印刷中.

    • Related Report
      1988 Annual Research Report
  • [Publications] Kazuo,Yamaguchi: Bull. Chem. Soc. Japan. 61. 2047-2054 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Hitoshi,Kubiniwa: Chen. Letters. 923-926 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Isao,Ando: "Annual Reports on NMR Spectroscopy" Academic Press, 210-290 (1989)

    • Related Report
      1988 Annual Research Report
  • [Publications] Takeshi Yamanobe: Macromolecules. 21. 48-50 (1988)

    • Related Report
      1987 Annual Research Report
  • [Publications] Hidetoshi Miyamoto: J.Mol.Structure.

    • Related Report
      1987 Annual Research Report
  • [Publications] Shinji Ando: J.Amer.Chem.Soc.

    • Related Report
      1987 Annual Research Report
  • [Publications] Tatsuo Asakura: J.Mol.Structure.

    • Related Report
      1987 Annual Research Report
  • [Publications] Kazuo Yamaguchi: Bull.Chem.Soc.Japan.

    • Related Report
      1987 Annual Research Report
  • [Publications] 久保庭均: NMR討論会要旨集. 26. 29-31 (1987)

    • Related Report
      1987 Annual Research Report

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Published: 1987-04-01   Modified: 2016-04-21  

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