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Pathogenetic investigations for human Duchenne muscular dystrophy-Adenylate kinase as a molecular marker-

Research Project

Project/Area Number 62480175
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Hygiene
Research Institution宮崎医科大学

Principal Investigator

HAMADA Minoru  MIYAZAKI MEDICAL COLLEGE MEDICAL SCIENCE PROFESSOR, 医学部, 教授 (90039529)

Co-Investigator(Kenkyū-buntansha) UESUGI Seiichi  OSAKA UNIVERSITY PHARMACEUTICAL SCIENCE ASSOCIATE PROFESSOR, 薬学部, 助教授 (70028851)
TAKENAKA Hitoshi  MIYAZAKI MEDICAL COLLEGE MEDICAL SCIENCE ASSISTANT PROFESSOR, 医学部, 助手 (10179658)
Project Period (FY) 1987 – 1989
Project Status Completed (Fiscal Year 1989)
Budget Amount *help
¥6,600,000 (Direct Cost: ¥6,600,000)
Fiscal Year 1989: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 1988: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1987: ¥5,000,000 (Direct Cost: ¥5,000,000)
Keywordsadenylate kinase / MgATP binding site / point mutation / protein engineering / synthetic gene / AMP binding site / アデニル酸キナ-ゼ / MgATP結合部位 / アミノ酸点変異 / タンパク質工学 / 人工合成遺伝子 / AMP結合部位 / アデニル酸キナーゼ / 合成遺伝子 / 部位特異性変換 / 基質酵素の結合部位 / 筋ジストロフィー症 / プロティンエンジニアリング
Research Abstract

Although extensive studies including X-ray crystallographic and NMR studies have been made on adenylate kinases, the substrate binding sites are still not unequivocally established.
In an attempt to identify the binding sites for MgATP^<2-> and for AMP^<2-> in human ncytosolic nadenylate kinase (EC 2.7.4.3, hAK1), we have investigated the functions of arginine residues (R44, R132, R138 and R149) which are assumed to interact with the nphosphoryl groups of AMP^<2-> and MgATP^<2->. Using the site-directed mutagenesis method, point mutations were made in the artificial gene for hAK1 that we previously nsynthesized (Kim et al.,(1989) Protein Eng. 2, 379-3861 by replacing these arginines with nalanines to create the mutants, R44A hAK1, R132A hAK1, R138A hAK1 and R149A hAK1. The increase in K_m values of the mutant enzymes for AMP^<2-> was in the following order; R44A (44-fold), R138A (21-fold), R149A (18-fold) , R132A (13-fold) . That for MgATP^<2-> was in the order; R132A (18-fold), R149A (8-fold), R44A (4-fold), R138A (1.3-fold).
Moreover, mutants R132A, R138A and R149A were very inefficient in catalysis. These results strongly suggest that Arg44 is important in maintaining the proper geometry of the AMP binding pocket and Argl38 is a catalytically indispensable residue which makes contacts with the nphosphoryl group of AMP. This finding leads us to the conclusion that the binding site for AMP is the one previously assigned as ATP binding site by Pai et al.[(1977) J. Mol. Biol. 114.37-45).

Report

(4 results)
  • 1989 Annual Research Report   Final Research Report Summary
  • 1988 Annual Research Report
  • 1987 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] 濱田稔,竹中均,澄田道博: "アデニル酸キナ-ゼ-構造と機能" 蛋白質・核酸・酵素. 33. 1708-1728 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kim,H.J.,Nishikawa,S.,Tanaka,T.,Uesugi,S.,Tanaka,H.,Hamada,M.and Kuby,S.A.: "Synthetic genes for human muscle-type adenylate Kinase in Escherichia Coli." Protein Engineering. 2. 379-386 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kuby,S.A.Hamada,M.Johnson,M.,Russell,G.A.,Manship,M.,Palmieri,R.H.,Fleming,G.,Bredt,D.and Mildvan,A.S.: "Synthesis and preparation of peptide and fragments of rabbit muscle adenylate Kinase and their nucleotide binding properties." J.Protein Chemistry. 8. 549-562 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kim,H.J.,Nishikawa,S.,Tokutomi,Y.,Takenaka,H.,Hamada,M.,Kuby,S.A.and Uesugi,S.: "In Vitro Mutagenesis studies at the arginine residues of adenylate kinase,A revised finding site for AMP in the X-ray model." Biochemistry. 29. 1107-1111 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kim,H.J.,Tokutomi,Y.,Nishikawa,S.,Takenaka,H.,Hamada,M.,Kuby,S.A.and Uesugi,S: "In Vitro mutagenesis of arginine residues at the catalytic cleft of human adenylate Kinase." Isoenzymes(in press). (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kurokawa,Y.,Takenaka,H.,Sumida,M.,Oka,K.,Hamada,M.and Kuby,S.A.: "Multiforms of mammalian adenylate kinase and its monoclonal antibody against AKI." Enzymes(in press). (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Hamada,M.,Takenaka,H.,Fukumoto,K.,Fukamachi,S.,Yamaguchi,T.,Sumida,M.,Shiosaka,T.,Kurokawa,Y.,Okuda,H.and Kuby,S.A.: "“Isozymes":Current Topics in Biological and Medical Research Vol.16:Agriculture,Physiology and Medicine" Alan R.Liss,Inc.New York(U.S.A.), 19 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Hamada,M.,Takenaka,H.,and Sumida,M.: "“A Study of Enzymes" Vol.II Chapter 8,b(in press)" CRC Press Inc.Florida(U.S.A.), (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Hamada, M., Takenaka, H., Fukumoto, K., Fukamachi, S., Yamaguchi, T., Sumida, M., Shiosaka, T., Kurokawa, Y., Okuda, H. and Kuby, S.A.: "Structure and function of adenylate kinase in normal humans and muscular dystrophy patients." Isozyme, 16, 81-99, 1987.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Hamada, M., Takenaka, H. and Sumida, M.: "Adenylate kinase-Structure and function.(in Japanese), Kyoritu Shuppan Inc, Tokyo" PNE, 33, 1708-1728, 1988.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kim, H.J., Nishikawa, S., Tanaka, T., Uesugi, S., Takenaka, H., Hamada, M. and Kuby, S.A.: "Synthetic gene for human muscle-type adenylate kinase in Escherichia Coli." Protein Eng., 2, 379-386, 1989.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kuby, S.A., Hamada, M., Johnson, M., Russell, G.A., Manship, M., Palmieri, R.H., Fleming, G., Bredt, D. and Mildvan, A.K.: "Synthesis and preparation of peptide and fragments of rabbit muscle adenylate kinase and their nucleotide binding properties." J.Prot.Chem., 8, 549-562, 1989.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kim, H.J., Nishikawa, S., Takenaka, H., Hamada, M., Kuby, S.A. and Uesugi, S.: "In Vitro mutagenesis studies at the arginine residues of adenylate kinase, Arevised binding site for AMP in the X-ray model." Biochemistry, 29, 1990.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kim, H.J., Tokutomi, Y., Nishikawa, S., Takenaka, H., Hamada, M., Kuby, S.A. and Uesugi, S.: "In Vitro mutagenesis of arginine residues at the catalytic cleft of human adenylate kinase." Isozymes, 1990.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kim, H.J., Nishikawa, S., Takenaka, H., Hamada, M., Kuby, S.A. and Uesugi, S.: "In Vitro mutagenesis of adenylate kinase at arginine residues : Revised Binding site for AMP." Protein Eng., 1990.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kurokawa, Y., Takenaka, H., Sumida, M., Oka, K., Hamada, M. and Kuby, S.A.: "Multiforms of mammalian adenylate kinase and its monoclonal antibody against AKl." Enzymes, 1990.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Hamada, M., Takenaka, H., Sumida, M. and Kuby, S.A.: "Adenylate kinase-Molecular forms and function. CRC Press Inc., Florida" A Study of Enzymes (Kuby, S.A. ed.) Chapter 8.b., 1990.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] 濱田稔,竹中均,澄田道博: "アデニル酸キナ-ゼーー構造と機能" 蛋白質・核酸・酵素. 33. 1708-1728 (1988)

    • Related Report
      1989 Annual Research Report
  • [Publications] Kim,H.J.,Nishikawa,S.,Tanaka,T.,Uesugi,S.,Tanaka,H.,Hamada,M.and Kuby,S.A.: "Synthetic genes for human muscle-type adenylate kinase in Escherichia Coli" Protein Engineering. 2. 379-386 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Kuby,S.A.,Hamada,M.,Johnson,M.,Russell,G.A.,Manship,M.,Palmieri,R.H.,Fleming,G.,Bredt,D.and Mildvan,A.S.: "Synthesis and preparation of peptide and fragments of rabbit muscle adenylate kinase and their nucleotide binding properties" J.Protein Chemistry. 8. 549-562 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Kim,H.J.,Nishikawa,S.,Tokutomi,Y.,Takenaka,H.,Hamada,M.,Kuby,S.A.and Uesugi,S.: "In Vitro Mutagenesis studies at the arginine residues of adenylate kinase,A revised finding site for AMP in the X-ray model" Biochemistry. 29. 1107-1111 (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] Kim,H.J.,Tokutomi,Y.,Nishikawa,S.,Takenaka,H.,Hamada,M.,Kuby,S.A.and Uesugi,S.: "In Vitro mutagenesis of arginine residues at the catalytic cleft of human adenylate kinase" Isoenzymes. (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] Kurokawa,Y.,Takenaka,H.,Sumida,M.,Oka,K.,Hamada,M.and Kuby,S.A.: "Multiforms of mammalian adenylate kinase and its monoclonal antibody against AK1" Enzymes. (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] Hamada,M.,Takenaka,H.,Fukumoto,K.,Fukamachi,S.,Yamaguchi,T.,Sumida,M.,Shiosaka,T.,Kurokawa,Y.,Okuda,H.and Kuby,S.A.: "“Isozymes":Current Topics in Biological and Medical Research Vol.16:Agriculture,Physiology and Medicine" Alan R.Liss,Inc.New York(U.S.A.), 19 (1987)

    • Related Report
      1989 Annual Research Report
  • [Publications] Hamada,M.,Takenaka,H.and Sumida,M.: "“A Study of Enzymes",Vol.II Chapter 8,b" CRC Press Inc.Florida(U.S.A.), (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] 金曉駿,徳冨由以子,西川諭,田中俊樹,上杉晴一,竹中均,濱田稔: 生化学. 60(8). 740 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Kim.H.J.;Nishikawa S.;Tanaka T.;Uesugi S.;Takenaka H.;Hamada M.;Kuby. S.A.: Prot.Engineer. 2. 379-386 (1989)

    • Related Report
      1988 Annual Research Report
  • [Publications] 金曉駿;西川諭;田中俊樹;上杉晴一;竹中均;濱田稔: 日本薬学会誌方108年会(広島). (1988)

    • Related Report
      1987 Annual Research Report

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Published: 1987-04-01   Modified: 2016-04-21  

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