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Study on Ion Binding between DNA and Sodium Ion by Sound Velocity Measurement.

Research Project

Project/Area Number 62550650
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 高分子物性
Research InstitutionSchool of Engineering, Nagoya University

Principal Investigator

SHINOBU Koda  School of Engineering, Nagoya University., 工学部, 助手 (10126857)

Project Period (FY) 1987 – 1988
Project Status Completed (Fiscal Year 1988)
Budget Amount *help
¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 1988: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 1987: ¥1,400,000 (Direct Cost: ¥1,400,000)
KeywordsDNA / Ion Binding / Sound Velocity of Polyelectrolyte Solutions / Polyphosphate / Na^+の活量 / 高分子溶液の音速
Research Abstract

The nature of the interaction between DNA and sodium ion was investigated by sound velocity. When aquous solution of DNA was titrated with concentrated solution of NaCl, the sound velocity, i.e., the adiabatic compressibility of the solution changes linearly with added salt concentration. If there is strong interaction between counterion and polyion accompanying changes of hydration volumes, the sound velocity dose not change linearly. In the case of polyphosphate (PP) solutions, the increase of sound velocity of the solutions dose not change linearly and shows a breaking point. Na^+ ion below the braking point binds to PP so that Na^+ may perturb the hydration layer around PP. The degree of ion binding obtained from the breaking point is ca. 0.25. the degree of ion binding of PP obtained from the activity measurement was estimated as fa 0.3, which gives the degree of ion binding due to atmospheric interaction between ions. Therefore, Na^+ is strongly attracted by PP^-. In the case of DNA, fa 0. but Na^+ ion bound to the hydration layer was not detected. These results indicate that the interaction between DNA and Na^+ is atmospheric one and the hydration layer around DNA is scarcely perturbed by approach of Na^+, since phosphate ion in DNA is surrounded by bases, such as adenine, thymine and so on and the charge density of DNA is low in comparison with that of PP.

Report

(3 results)
  • 1988 Annual Research Report   Final Research Report Summary
  • 1987 Annual Research Report
  • Research Products

    (8 results)

All Other

All Publications (8 results)

  • [Publications] S.Koda: Biophys.Chem.28. 115-120 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S.Koda: Polymer J.20. 357-358 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S.Koda: Polymer. 29. 2100-2104 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S. Koda: "Studies on the Interaction between polyion and Counterions by Sound Velocity (II)." Biophys. Chem.28. 112-120 (1987)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S. Koda: "Counterion Binding of Ionene Polymers in Water-Acetone Mixtures by Means of Activity Measurement." Polymer J.20. 357-358 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S. Koda: "Hydration of Carboxymethyl Cellulose and Carboxymethyl Dextran." Polymer. 29. 2100-2104 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] S.Koda: Polymer J.20. 357-358 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] S.Koda: Polymer. 29. 2100-2104 (1988)

    • Related Report
      1988 Annual Research Report

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Published: 1987-04-01   Modified: 2016-04-21  

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