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Conformational change of DNA by DNA-binding proteins

Research Project

Project/Area Number 62580215
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 分子遺伝学・分子生理学
Research InstitutionAichi Medical University

Principal Investigator

FUKADA Masako  Aichi Medical University, School of Medicine, 医学部, 助教授 (70065548)

Project Period (FY) 1987 – 1988
Project Status Completed (Fiscal Year 1988)
Budget Amount *help
¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 1988: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 1987: ¥900,000 (Direct Cost: ¥900,000)
KeywordsDNA / Higher-order structure / DNA-binding protein / Anti-DNA antibody / モノクローナル抗体 / SP^1因子 / Sp1因子 / モノクローナル抗DNA抗体 / SpI因子 / プロモーター
Research Abstract

The promoter of human EGF receptor gene contains six pyrimidine clusters; one overlaps a SP1-binding sequence, two were at adifferent position and each of them is contiguous to a SP1-binding sequence, another is within a stem-loop sequence, and remaining two are situated with no relation to these specific sequences. Using pERCAT consisting of the promoter of human EGF receptor gene and a CAT gene, conformational change of DNA structrue and its relation to biological activity of DNA were analyzed employing monoclonal anti-DNA antibodies recognizing higher-order structures of DNA and a transcriptional factor, SP1, for a probe. The results were as follows: 1. SP1 bound to linear DNA as well as superhelical DNA, but it enhanced transcription of the latter much more than that of the former. 2. The Fab fraction of anti-deoxypyrimidine cluster antibody (5H4) bound to pERCAT whose SP1-binding sequences were covered with SP1 but had no effect on template activity of pERCAT. 3. SP1 did not bind … More to pERCAT in which Fab fractions of 5H4 bound to the pyrimidine clusters, and the addition of SP1 did not enhance transcription in the in vitro system consisting of Fab-bound pERCAT as a template. 4. We established 17 hybridomas producing monoclonal anti-DNA antibodies with the following characteristics: (1) reactive to single-stranded DNA; (2) reactive to double-stranded DNA as well as singlestranded DNA; (3) reactive to polydeoxypyrimidine; (4) reactive to stem-loop DNA; (5) reactive to brominated poly (dGdC) and N-acetoxy-2-acetylaminofruorene-treated poly(dG-dC), but not to poly(dG-dC); and (6) reactive to a bending dna fragment, GGG(A_5N_5)_5A_5CGG. We are now studying whether the bound Fab fraction of 5H4 covers the contiguous SP1-binding locus or causes conformational changes of DNA that prevent SP1 binding, and characterizing the interaction between conformational change and the biological activity of DNA using monoclonal antibodies specific to higher-order structures of DNA as a probe. Less

Report

(3 results)
  • 1988 Annual Research Report   Final Research Report Summary
  • 1987 Annual Research Report
  • Research Products

    (19 results)

All Other

All Publications (19 results)

  • [Publications] Masako Fukada;Kazuhiro Yoshikawa: Nucleic Acids Res. Symp. series. 19. 69-72 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Masako Fukada;Kazuhiro Yoshikawa;Yoshimasa Miyagawa: J. Immun. Methods. 110. 137-141 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Masako Fukada;Kazuhiro Yoshikawa: J.Immunol.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] 深田允子: 文部省科学研究費特定研究 「核酸コンフォーメイションとその識別」 報告集. 108-110 (1987)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] 深田允子: 文部省科学研究費特定研究 「核酸コンフォーメイションとその識別」 報告集. 178-181 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] 深田允子・吉川和宏: 第1回セザール生命科学シンポジウム報告集.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Masako Fukada; Kazuhiro Yoshikawa: "Monoclonal anti-DNA antibody: preparation and availability." Nucleic Acids Res. Symp. series. 19. 69-72 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Masako Fukada: "Regulation of gene expression by proteins recognizing higer-order structures of DNA." Research Report of Grant-in-Aid for Special Project Research on Conformation and Recognition of Nucleic Acids. 178-181 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Masako Fukada; Kazuhiro Yoshikawa; Yoshimasa Miyagawa: "Recovery of DNA fragments specifically bound by monoclonal anti-DNA antibody." J. Immun. Methods.110. 137-141 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Masako Fukada; Kazuhiro Yoshikawa: "Characteristics of monoclonal anti-DNA antibodies and application to topography of DNA in cells." J. Immunol.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Masako Fukada; Kazuhiro Yoshikawa: "Monoclonal anti-DNA antibody; Characteristics and availability." The First Sezar Symposium on Life Science.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1988 Final Research Report Summary
  • [Publications] Masako Fukada,;Kazuhiro Yoshikawa.: Nucleic Acids Res.Symp.series. 19. 69-72 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Masako Fukada,;Kazuhiro Yoshikawa,Yoshimasa Miyagawa.: J.Immun.Methods. 110. 137-141 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Masako Fukada,;Kazuhiro Yoshikawa.: J.Immunol.

    • Related Report
      1988 Annual Research Report
  • [Publications] 深田允子: 文部省科学研究費特定研究「核酸コンフォーメイションとその識別」報告集. 178-181 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] 深田允子.吉川和宏: 第1回セザール生命科学シンポジウム報告集.

    • Related Report
      1988 Annual Research Report
  • [Publications] M.Fukada & K.Hoshikawa: Nucleic Acids Research. Synposium series. 19. 69-72 (1988)

    • Related Report
      1987 Annual Research Report
  • [Publications] M.Fukada, K.Yoshikawa & Y.Miyagawa: J.Immunolobical Methods.(1988)

    • Related Report
      1987 Annual Research Report
  • [Publications] M.Fukada & K.Yoshikawa: J.Immunology.

    • Related Report
      1987 Annual Research Report

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Published: 1987-04-01   Modified: 2016-04-21  

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