• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Elucidation of Dynamical Structures of Proteins by Ultraviolet Resonance Raman Spectroscopy

Research Project

Project/Area Number 63470141
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 生物物性学
Research InstitutionInstitute for Molecular Science Okazaki National Research Institutes

Principal Investigator

KITAGAWA Teizo  Professor, Institute for Molecular Science, 分子科学研究所, 教授 (40029955)

Co-Investigator(Kenkyū-buntansha) OGURA Takashi  Research Associate, Institute for Molecular Science, 分子科学研究所, 助手 (70183770)
Project Period (FY) 1988 – 1989
Project Status Completed (Fiscal Year 1989)
Budget Amount *help
¥6,900,000 (Direct Cost: ¥6,900,000)
Fiscal Year 1989: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1988: ¥5,400,000 (Direct Cost: ¥5,400,000)
KeywordsResonance Raman / UV Resonance Raman / Hemoglobin / Time Resolved Raman / Quaternary Structure / 時間分解ラマン / 4次構造変化 / タンパク質の動的構造
Research Abstract

Dynamical structures of proteins is substantial to understand a structure-function relationship of proteins. Since vibrational spectroscopy is sensitive to a geometrical structure of molecules and its time response is sufficiently fast, we adopted ultraviolet resonance Raman technique to probe selectively the vibrations of aromatic residues with absorption bands around 200-240 nm. First, an experimental system was settled. The fourth harmonic of Nd:YAG laser was brought into a 1 m hydrogen Raman shifter, and the 218 nm radiation was isolated. Raman scattering was detected with a solar blind photomultiplier attached to a 1.26 m single monochomator. A grating with 2400 gr/mm was used in the second order. With this system dynamical features of quaternary structure of carbonmonoxy hemoglobin (COHb) after photolysis were pursued by observing resonance-enhanced Raman bands of the aromatic residues. The Raman scattering was excited by 10 ns pulses at 218 nm, which were obtained from the secon … More d H_2 Raman shift of the fourth harmonic of a Nd:YAG laser, while CO was photodissociated by 10-ns pulses at 419 nm generated by a nitrogen-laser pumped dye laser or by pulses at 436 nm generated from the first H_2 Raman shift of the second harmonic of the Nd:YAG laser The delay time (DELTAt_d) from the photolysis pulse to the Raman probe pulse was varied from -100 to 500 mus. The observed spectra obtained for DELTAt_d =-100 mus and 10 ns were the same as each other and as that obtained without the pump beam, contrary to expectations based on the reported 7-ns change of the protein structure, but the spectral pattern did change when DELTAt_d changed from 10 to 20 mus; the bands at 1613 and 1011 cm^<-1> decreased in intensity, and the band at 878 cm^<-1> shifted to 883 cm^<-1>. These spectral changes appeared as a smooth monotonous function of time, suggesting the absence of an intermediate around DELTA_d = 10 mus. A similar spectral change was also observed upon addition of an effector (inositol hexaphosphate) to metHbF. Accordingly, the observed changes of the UV resonance Raman spectra were attributed to a quaternary structure change, presumably to a status change of beta37-Trp and alpha42-Tyr at the alpha1-beta2 subunit interface. Less

Report

(3 results)
  • 1989 Annual Research Report   Final Research Report Summary
  • 1988 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] S.Kaminaka,T.Ogura,T.Kitagawa: "Time-resolved ultraviolet resonance Raman study of the photolysis of carbonmonoxy hemoglobin:Relaxation of the globin structure." Journal of the American Chemical Society. 112. 23-27 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] T.Ogura,S.Yoshikawa,T.Kitagawa: "Raman/Absorption simultaneous measurements for cytochrome oxidase sompound A at room temperature with a novel flow apparatus" Biochemistry. 28. 3022-3027 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] A.L.Verma,K.Kimura,T.Yagi,A.Nakamura,H.Inokuchi,T.Kitagawa: "SERR evidense for enzymic reduction of cytochrome c_3 adsorbed on Ag colloids." Chemical Physics Letters. 159. 189-192 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] S.Hashimoto,T.Kotani,R.Nakajima,S.Ohtaki,I.Yamazaki,T.Kitagawa: "Resonance Raman characterization of hog thyroid peroxidase:A SERRS study." FEBS Letters. 248. 205-209 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Y.Ozaki,K.Aoyagi,K.Iriyama,H.Ogoshi,T.Kietgawa: "Resonance Raman characterization of N-methyl-octaethylporphyroinato-cabale(II)." Journal of Physical Chemistry. 93. 3842-3847 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] M.Nagai,Y.Yoneyama,T.Kitagawa: "Characterization in tyrosine coordinations of four hemoglobins M probed by resonance Raman spectroscopy." Biochemistry. 28. 2418-2422 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] 北川禎三,A.T.Tu: "ラマン分光法入門" 化学同人, 208 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] 北川禎三(他): "新生化学実験講座" 東京化学同人, (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] S. Kaminaka, T. Ogura and T. Kitagawa: "Time-resolved Ultraviolet Resonance Raman Study of the Photolysis of Carbonmonoxy Hemoglobin: Relaxation of the Globin Structure." Journal of the American Chemical Society 112, 23-27 (1990).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] T. Ogura, S. Yoshikawa and T. Kitagawa: "Raman/Absorption Simultaneous Measurements for Cytochrome Oxidase Compound A at Room Temperature with a Novel Flow Apparatus." Biochemistry 28, 8022-8027 (1989).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] S.Kaminaka,T.Ogura,T.Kitagawa: "Time-resolved Ultraviolet Resonance Raman Study of the Photolysis of Carbonmonoxy Hemoglobin:Relaxation of the Globin Structure." Journal of the American Chemical Society. 112. 23-27 (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] T.Ogura,S.Yoshikawa,T.Kitagawa: "Raman/Absorption Simultaneous Measurements for Cytochrome Oxidase Compound A at Room Temperature with a Novel Flow Apparatus." Biochemistry. 28. 8022-8027 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] A.L.Verma,K.Kimura,T.Yagi,A.Nakamura,H.Inokuchi,T.Kitagawa: "SERR Evidence for Enzymic Reduction of Cytochrome C_3 Adsorbed on Ag Colloids." Chemical Physics Letters. 159. 189-192 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] S.Hashimoto,T.Kotani,R.Nakajima,S.Ohtaki,I.Yamazaki,T.Kitagawa: "Resonance Raman Characterization of Hog Thyroid Peroxidase:A SERRS Study." FEBS Letters. 248. 205-209 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Y.Ozaki,K.Aoyagi,K.Iriyama,H.Ogoshi,T.Kitagawa: "Resonance Raman Characteristics of NーMethy1ーOctaethylporphyrinatoーcobalt(II)." Journal of the Physical Chemistry. 93. 3842-3847 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] M.Nagai,Y.Yoneyama,T.Kitagawa: "Characteristics in Tyrosine Coordinations of Four Hemoglobins M Probed by Resonance Raman Spectroscopy." Biochemistry. 28. 2418-2422 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] 北川禎三(他): "新生化学実験講座" 東京化学同人, (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] T.Ogura;T.Kitagawa: Review of Scientific Instruments. 59. 1316-1320 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] K.Kamogawa;T.Funii;T.Kitagawa: Applied Spectroscopy. 42. 248-254 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] A.L.Verma;K.Kimura;A.Nakamura;T.Yagi;H.Inokuchi;T.Kitagawa: Journal of American Chemical Society. 110. 6617-6623 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] J.De Groot;R.E.Hester;S.Kaminaka;T.Kitagawa: Journal of P-ysical Chemistry. 92. 2044-2048 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] T.Fujii;K.Kamogawa;T.Kitagawa: Chemical Rhysics Letters. 148. 17-20 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] N.Kitajima;T.Koda;S.Hashimoto;T.Kitagawa;Y.Morooka: Journal of Chemical Society,Chemical Communications. 151-152 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] 北川禎三A.T.Tu: "ラマン分光学入門" 化学同人, 1-203 (1988)

    • Related Report
      1988 Annual Research Report

URL: 

Published: 1988-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi