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Circular Excision Products Generated by T-cell Receptor Gene Rearrangements

Research Project

Project/Area Number 63480169
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Immunology
Research InstitutionKyoto University

Principal Investigator

YAMAGISHI Hideo  Kyoto University, Faculty of Science Department of Biophysics, Associate Professor, 理学部, 助教授 (90025429)

Co-Investigator(Kenkyū-buntansha) FUJIMOTO Shinji  Kyoto University Chest Disease Research Institute Research Associate, 胸部疾患研究所, 助手 (60199370)
Project Period (FY) 1988 – 1990
Project Status Completed (Fiscal Year 1990)
Budget Amount *help
¥6,300,000 (Direct Cost: ¥6,300,000)
Fiscal Year 1990: ¥1,600,000 (Direct Cost: ¥1,600,000)
Fiscal Year 1989: ¥1,600,000 (Direct Cost: ¥1,600,000)
Fiscal Year 1988: ¥3,100,000 (Direct Cost: ¥3,100,000)
KeywordsThymocytes / Extrachromosomal circular DNA / Deletional recombination / TCRdelta / TCRgamma / TCRbeta / TEA-Calpha transcript / Silencer / 胸腺腫細胞 / TEAーC_α転写物 / CAT解析 / TCRトランスγーα組換え / D_βーD_βシグナル結合 / N塩基挿入 / タ-ミナル・ジオキシヌクレオチヂル・トランスクエラ-ゼ活性 / TCRγ / Vγの出現頻度 / δ鎖欠失組換え / TEA-Cα不妊RNA / 転写依存型遺伝子再構成 / 末梢リンパ血 / 環状DNA / TCR VD(D)DJ再配列 / 新しいVδ鎖 / DδーDδシグナル結合 / 定着性Jδ_2型リンパ球 / TCRδ鎖欠失組換え
Research Abstract

We have cloned extrachromosomal circular DNAs containing T Cell Receptor (TCR) delta, gamma and bata gene segments in fetal and adult mouse thymocytes and splenocytes. We found that : (1) New Vdelta genes, vdelta7, Vdelta8 and Vdelta9 ; (2) Jdelta2 usage in thymocytes but not in splenocytes ; (3) Novel sequences homologous to human delta-gene deleting elements, deltaRec1, deltaRec2 and deltaRec3, and a pseudogene of Jalpha (PSIJalpha) lying upstream of the Jalpha-Calpha intron ; (4) Reciprocal joining of two Ddelta elements ; (5) Preferential usage of Vgamma5 and Vgamma6 in late fetal thymocytes and general usage of Vgamma4 and Vgamma7 in both late fetal and adult thymocytes ; (6) Preferential usage of C2-associated gamma gene ; (7) Circular excision products by TCR gamma-alpha transrearrangements ; (8) High frequency of nongermline element (N) insertions into signal joints of gamma (70%), delta (25%) and beta (20%) in adult thymocytes but no insertions in fetal thymocytes ; (9) T-cell early alpha (TEA) transcripts spliced to Calpha ; (10) Maximum expression of TEA-Calpha at fetal stage of 17 days ; (11) Silencer region 2.4 kb upstream from a initiation site of TEA transcription functioning in alphabeta T-cell line, EL-4.

Report

(4 results)
  • 1990 Annual Research Report   Final Research Report Summary
  • 1989 Annual Research Report
  • 1988 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Masaaki Toda: "Structure of extrachromosamal circulon DNAs excised from Tーcell antigen receptor alpha and deltaーchain loci" Journal of Molecular Biology. 202. 219-231 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Sunao Takeshita: "Excision products of the Tーcell receptor gene Support a progressive rearrangement model of the α/δ locus" The EMBO Journal. 8. 3261-3270 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Takuji Iwasato: "Circular DNA is excised by immunoglobulin class switch recombination" Cell. 62. 143-149 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] 山岸 秀夫: "T細胞抗原受容体" ファルアメデイカ. (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Takuji Iwasato: "Novel excision products of TCRδ gene reanangenehts and developmental stage speciticity implied by the freguency of nuceestide insertions at signal joints"

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Eiko Kudo: "Tーcell maturotion arrests characterized by TCR gene reamangements and expression in radiationーinduced thymic lymphomas"

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Masaaki Toda et al: "Structure of extrachromosomal circular DNAs excised from T-cell antigen receptor alpha and delta-chain loci" Journal of Molecular Biology. 202. 219-231 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Sunao Takeshita et al: "Excision products of the T-cell receptor gene support a progressive rearrangement model of the alpha/delta locus" The EMBO Journal. 8. 3261-3270 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Takuji Iwasato et al: "Circular DNA is excised by immunoglobulin class switch recombination" cell. 62. 143-149 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Takuji Iwasato et al: "Novel excision products of TCRgamma gene rearrangements and developmental stage specificity implied by the frequency of nucleotide insertions at signal joints"

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Eiko Kubo et al: "T-cell maturation arrests characterized by TCR gene rearrangements and expression in radiation-induced thymic lymphomas"

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Takuji Iwasato: "Circular DNA is excised by immunoglobulin class switch recombination" Cell. 62. 143-149 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] Toshiyasu Hirama: "Structure of extrachromosomal circular DNAs generated by immunoglobulin light chain gene rearrangements" Immunology Letters. 27. 19-24 (1991)

    • Related Report
      1990 Annual Research Report
  • [Publications] Katsuya Harada: "Lack of feedback inhibition of Vk gene rearrangement by productively rearranged alleles" Journal of Experimental Medicine. 173. 409-415 (1991)

    • Related Report
      1990 Annual Research Report
  • [Publications] 山岸 秀夫: "T細胞抗原受容体" ファルマメディカ. 印刷中. (1991)

    • Related Report
      1990 Annual Research Report
  • [Publications] Takuji Iwasato: "Novel excision products of TCR γ gene rearrangements and developmental stage speciticity implied by the freqnency of nucleotide insertions at signal joints"

    • Related Report
      1990 Annual Research Report
  • [Publications] Eiko Kubo: "F cell maturation arrests characterized by TCR gene reanangemento and oxpression in radiationーinduced thymic lymphomas"

    • Related Report
      1990 Annual Research Report
  • [Publications] Sunao TAKESHITA: "Excision products of the T cell receptor gene support a progressive rearrangement model of the α/δ locus" EMBO Journal. 8. 3261-3270 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Masaaki TODA: "Excision products of immunoglobulin gene rearrangements" Immunology Letters. 21. 311-316 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] 山岸秀夫: "免疫グロブリン遺伝子由来の環状DNA" 臨床免疫. (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] 山岸秀夫: "環状DNAに記録される細胞分化の足跡" 化学と生物. (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] 山岸秀夫: "分子生物学の進歩、第10巻免疫学" 丸善株式会社, 78-88 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Masaaki,Toda: Journal of Molecular Biology. 202. 219-231 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] 山岸秀夫: 実験医学. 6. 106-114 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] 山岸秀夫: 代謝「免疫'88」. 25(増刊). 73-81 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Masaaki,Toda: Immunology Letters. (1989)

    • Related Report
      1988 Annual Research Report
  • [Publications] Sunal,Takeshita: Cell.

    • Related Report
      1988 Annual Research Report
  • [Publications] 山岸秀夫: "分子生物学の進歩、第10巻免疫系" 丸善株式会社,

    • Related Report
      1988 Annual Research Report

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Published: 1988-04-01   Modified: 2016-04-21  

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