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Molecular Mechanism for Initiation of DNA Replication of ColE2 and Co1E3 Plasmids

Research Project

Project/Area Number 63480510
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 分子遺伝学・分子生理学
Research InstitutionOsaka University

Principal Investigator

ITOH Tateo  Osaka Univ., Biology Dept., Associate Professor, 理学部, 助教授 (40051817)

Co-Investigator(Kenkyū-buntansha) HORII Toshihiro  Osaka Univ., Biology Dept., Research associate, 理学部, 助手 (80142305)
Project Period (FY) 1988 – 1990
Project Status Completed (Fiscal Year 1990)
Budget Amount *help
¥6,800,000 (Direct Cost: ¥6,800,000)
Fiscal Year 1990: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1989: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1988: ¥4,300,000 (Direct Cost: ¥4,300,000)
KeywordsColicin E2 / Colicin E3 / Replication initiator protein / Replication origin / Plasmid-specificity / Primer RNA / Primase / Reconstituted system / 一方向複製 / プライマーRNA
Research Abstract

The basic replicons of ColE2 and ColE3 consist of three functional portions : A gene for the plasmid-specific initiator protein (Rep ; 33-35 Kda) ; an origin (32 and 33 bp) capable of initiating replication in the presence of the Rep protein ; a gene for an antigens RNA (RNA I ; 115 n) complementary to the 5' untranslated region of the Rep mRNA and negatively regulating initiation of replication.
Specificity of interaction of the Rep proteins and the origins is determined by the 20 amino acid-region near the carboxy terminal portion of the Rep protein of each plasmid and a single base pair deletion (ColE2) or insertion (ColE3) in the origin.
The partially purified ColE2 Rep protein was shown to bind specifically to the ColE2 origin by using the filter-binding method.
In vitro replication of ColE2 and ColE3 DNA in crude E. Coli cell extracts requires the Rep proteins and host DNA polymerase I but not RNA polymerase and DnaG primase. Replication starts from a region containing the cloned origin and proceeds unidirectionally. The 5' end of the newly synthesized leading strand was localized at a fixed position within the origin. The 3' end of the newly synthesized lagging strand was localized at the downstream end of the origin. This seems to be the basic mechanism for the unidirectional replication. The newly synthesized leading strand contains three ribonucleotide residues (ppApGpA) at its 5' end.
The ColE2 Rep protein in conjunction with the host DNA polymerase I and single-strand DNA binding protein specifically starts the leading strand synthesis at the identical position with the identical primer RNA. The reaction specifically requires ADP in addition to ATP and GTP and incorporates ADP into the primer RNA. The Rep protein seems to be a novel sequence-specific primase capable of functioning on double-strand DNA.

Report

(4 results)
  • 1990 Annual Research Report   Final Research Report Summary
  • 1989 Annual Research Report
  • 1988 Annual Research Report
  • Research Products

    (32 results)

All Other

All Publications (32 results)

  • [Publications] T.ltoh: "Replication of ColE2 and ColE3 plasmids:In vitro replication system dependent on plasmidーcoded proteins." Mol.Gen.Genet.219. 249-255 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Y.Eguchi: "RNAーRNA interaction" Annual Rev.Biochem.60. 631-652 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] N.Nomura: "Identification of eleven singleーstrand initiation sequences for priming DNA replication in F,R6K,R100 and ColE2 plasmids." Gene.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] M.Kido: "Identification of a plasmidーcoded protein required for initiation of ColE2 DNA replication." Nucl.Acids Res.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] S.Takechi: "Mechanism of initiation of unidirectional ColE2 DNA replication."

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] S.Takechi: "Primer RNA synthesis by the plasmidーcoded Rep protein for initiation of ColE2 DNA replication."

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Toshihiro Horii: "Replication of ColE2 and ColE3 plasmids : The regions sufficient for autonomous replication." Mol. Gen. Genet.212. 225-231 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Yoshitaka Tajima: "Replication of ColE2 and ColE3 plasmids : Two incompatibility functions." Mol. Gen. Genet.,. 214. 451-455 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Hisashi Yasueda,: "Structural and functional organizations of Co1E2 and Co1E3 replicons." Mol. gen. Genet.215. 209-216 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Tateo Itoh: "Replication of ColE2 and ColE3 plasmids : In vitro replication system dependent on plasmid-coded proteins." Mol. Gen. Genet.219. 249-255 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Tateo Itoh: "Replication of ColE2 and ColE3 DNA and its regulation." J. Cel. Biochem. Suppl.13D. 127 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Yutaka Eguchi: "RNA-RNA interaction." Annual Rev. Biochem.,.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Nobuo Nomura: "Identification of eleven single-strand initiation sequences for priming DNA replication in F, R6K, R100 and ColE2 plasmids." Gene.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Mituru Kido: "Identification of a plasmid-coded protein required for initiation of ColE2 DNA replication." Nucl. Acids Res.,.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shinji Takechi: "Mechanism of initiation of unidirectional ColE2 DNA replication."

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shinji Takechi: "Mechanism of initiation of unidirectional ColE2 DNA replication." "Primer RNA synthesis by the plasmid-coded Rep protein for initiation of ColE2 DNA replication."

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Hideki Matui: "Sequence-specific interaction of the ColE2 Rep protein with the origin of replication."

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] T.ltoh: "Replication of ColE2 and ColE3 plasmids:In vitro replication system dependent on plasmidーcoded proteins." Mol.Gen.Genet.219. 249-255 (1989)

    • Related Report
      1990 Annual Research Report
  • [Publications] Y.Eguchi: "RNAーRNA interaction" Annual Rev.Biochem.60. 631-652 (1991)

    • Related Report
      1990 Annual Research Report
  • [Publications] N.Nomura: "Identification of eleven singleーstrand initiation sequences for priming DNA replication in F,R6K,R100 and ColE2 plasmids." Gene.

    • Related Report
      1990 Annual Research Report
  • [Publications] M.Kido: "Identification of a plasmidーcoded protein required for initiation of ColE2 DNA replication." Nucl.Acids Res.

    • Related Report
      1990 Annual Research Report
  • [Publications] S.Takechi: "Mechanism of initiation of unidirectional ColE2 DNA replication."

    • Related Report
      1990 Annual Research Report
  • [Publications] S.Takechi: "Primer RNA synthesis by the plasmidーcoded Rep protein for initiation of ColE2 DNA replication."

    • Related Report
      1990 Annual Research Report
  • [Publications] Toshihiro Horii: "Replication of ColE2 and ColE3 plasmids:The regions sufficient for autonomous replication." Molecular and General Genetics.212. 225-231 (1988)

    • Related Report
      1989 Annual Research Report
  • [Publications] Yoshitaka Tajima: "Replication of ColE2 and ColE3 plasmids:Two ColE2 incompatibility functions." Molcular and General Genetics.214. 451-455 (1988)

    • Related Report
      1989 Annual Research Report
  • [Publications] Hisashi Yasueda: "Structural and functional organizations of ColE2 and ColE3 replicons." Molcular and General Genetics.215. 209-216 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Tateo Itoh: "Replication of ColE2 and ColE3 plasmids:In vitro replication system dependent on plasmid-coded proteins." Molcular and General Genetics.219. 249-255 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Mitsuru Kido: "Identification of a plasmid-coded protein required for intication of ColE2 DNA replication."

    • Related Report
      1989 Annual Research Report
  • [Publications] Hisashi Yasueda: "Control of ColE2 plasmid replication;Regulation of Rep expression at post-transcriptional step."

    • Related Report
      1989 Annual Research Report
  • [Publications] Toshihiro Horii: Molecular and General Genetics. 212. 225-231 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Yoshitaka Tajima: Molecular and General Genetics. 214. 451-455 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Hisashi Yasueda: Molecular and General Genetics. 215. 209-216 (1989)

    • Related Report
      1988 Annual Research Report

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Published: 1988-04-01   Modified: 2016-04-21  

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