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Study on Binding Site of Polyamine Binding Protein

Research Project

Project/Area Number 63571024
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field Physical pharmacy
Research InstitutionJosai University

Principal Investigator

SAMEJIMA Keijiro  Josai Univ., Fac. of Pharm. Sci., Professor, 薬学部, 教授 (00072413)

Co-Investigator(Kenkyū-buntansha) SHIRAHATA Akira  Josai Univ., Fac. of Pharm. Sci., Research Associate, 薬学部, 助手 (50150107)
Project Period (FY) 1988 – 1990
Project Status Completed (Fiscal Year 1990)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1990: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 1989: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 1988: ¥1,100,000 (Direct Cost: ¥1,100,000)
KeywordsSpermidine synthase / Spermine synthase / Active site structure / Inhibitor / Substrate specificity / Affinity adsorbent / Polyamine binding protein / Purification of enzyme / ポリアミン結合部位 / アミノプロピル基転移反応 / アミノプロピルトランスフェラ-ゼ / スペルミジン結合部位 / 拮抗阻害剤 / ポリアミンアナログ / アフィニティ-吸着体 / アミノプロピルトランスフェラーゼ / 阻害剤のデザイン
Research Abstract

1. A model of the putrescine binding site of spermidine synthase was proposed based on the study of a number of monoamine and diamine compounds as potential inhibitors and substrates of the enzyme. The active site seems to have a relatively large hydrophobic cavity adjacent to a negatively charged site, to which a protonated aminogroup of putrescine binds, with another aminogroup of putrescine being situated in the hydrophobic cavity as a free form to be aminopropylated. During these studies, several new potent inhibitors were found for spermidine synthase.
2. On the basis of the above mentioned model, another modified one was proposed for spermine synthase, and several compounds designed according to the modified model, aminopropylated derivatives of those which inhibited spermidine synthase, were found to potently inhibit spermine synthase. Also, binding site for aminopropyl moiety of spermidine seemed to be fairly narrow groove on the active site of spermine synthase.
3. In the survey of compounds which show substrate activity for spermidine synthase, two diamine compounds possessing both primary and secondary amine were found to act as aminopropyl acceptor. As it was suggested from the model and their chemical structures that their secondary amines should be aminopropylated, several experiments were carried out to confirm the enzymatic aminopropylation of secondary amines.
4. Seven different polyamine linked sepharose were prepared for affinity chromatography of spermidine and/or spermine binding proteins, and were applied for spermine synthase. Comparative studies on affinity of the enzyme to the seven columns further supported its active site model. And some of the columuns were found to be excellent for purification of the enzyme.

Report

(4 results)
  • 1990 Annual Research Report   Final Research Report Summary
  • 1989 Annual Research Report
  • 1988 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] Shirahata,A., Morohoshi,T. and Samejima,K.: "Transー4ーmethylcyclohexylamine,a potent new inhibitor of spermidine synthase." Chem.Pharm.Bull.36. 3220-3222 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata.A., and Samejima,K.: "INhibitors acting at putrescine or spermidine site of aminotransferase." "The Biology and Chemistry of Polyamines" Edited by S.H.Goldemberg & I.D.Algranati, IRL Press.99-102 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata,A., Morohoshi,T., Fukai,M., Akatsu,S., and Samejima,K.: "Putrescine or spermidine binding site of aminopropyltransferase and competitive inhibitors" Biochem.Pharmcol.41. 205-212 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata,A., Zhu,C., Akatsu,S., Suzuki,Y., and Samejima,K.: "Ployamineーlinked sepharose : preparation and application to mammalian spermine synthase"

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata,A., Hosoda,H., Takahashi,N., and Samejima,K.: "Spermidine synthase can transfer aminopropyl moiety to secondary amino group of 4ーaminomethylpiperidine or Nーmonomethylputrescine"

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata, A., Morohoshi, T. and Samejima, K.: "Transー4-methylcyclohexylamine, a potent new inhibitor of spermidine synthase." Chem. Pharm. Bull.36. 3220-3222 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata, A., and Samejima, K.: "Inhibitors acting at putrescine or spermidine binding site of aminotransferase." "The Biology And Chemistry of Polyamines" Edited by S. H. Goldemberg & I. D. Algranati. IRL Press.99-102 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata, A., Morohoshi, T., Fukai, M., Akatsu, S., and Samejima, K.: "Putrescine or spermidine binding site of aminopropyltransferase and competitive inhibitors" Biochem. Pharmcol. 41. 205-212 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata, A., Zhu, C., Akatsu, S., Suzuki, Y., and Samejima, K.: "Polyamine-linked sepharose : preparation and application to mammalian spermine synthase"

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata, A., Hosoda, H., Takahashi, N., and Samejima, K.: "Spermidine synthase can transfer aminopropyl moiety to secondaryamino group of 4-aminomethylpiperidine or N-monomethylputrescine"

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] Shirahata,A.,Morohoshi,T.,Fukai,M.,Akatsu,S., and Samejima,K.: "Putrescine or spermidine binding site of aminopropyltransferase and competive inhibitors" Biochem.Pharmcol.41. 205-212 (1991)

    • Related Report
      1990 Annual Research Report
  • [Publications] Shirahata,A.,Zhu,C.,Akatsu,S.,Suzuki,Y.,and Samejima,K.: "Polyamineーlinked sepharose:preparation and application to mammalian spermine synthase"

    • Related Report
      1990 Annual Research Report
  • [Publications] Shirahata,A.,Hosoda,H.,Takahashi,N.,and Samejima,K.: "Spermidine synthase can transfer aminopropyl moiety to secondary amino group of 4ーaminomethylpiperidene or Nーmonomethylputrescine"

    • Related Report
      1990 Annual Research Report
  • [Publications] A.Shirahata,T.Morohoshi,M.Fukai,S.Akatsu and K.Samejima: "Active Site of Aminopropyltransferases And Development Of Inhibitors" J.Pharmacobio-Dyn.12. S-131 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] A.Shirahata,K.Samejima: "Inhibitors Acting At Putrescine Or Spermidine Binding Site Of Aminopropyltransferases" The Chemistry and Biology of Polyamines(eds.by Algranati et al.)ICSU Press. 99-102 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] 白幡晶: "ポリアミンの生理的役割の探索 生合成阻害剤の利用" 化学と生物. 28. 162-171 (1990)

    • Related Report
      1989 Annual Research Report
  • [Publications] A.Shirahata,T.Morohoshi,M.Fukai,S.Akatsu and K.Samejima: "Putrescine Or Spermidie Binding Site of Aminopropyl-transferases And Competitive Inhibitors" Biochem.Pharamacol.

    • Related Report
      1989 Annual Research Report
  • [Publications] AKIRA SHIRAHATA;ET AL.: J.Biochem.104. 717-721 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] AKIRA SHIRAHATA;ET AL.: Chem.Pharm.Bull.36. 3220-3222 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] AKIRA SHIRAHATA;ET AL.: Biochem. Pharmacol.

    • Related Report
      1988 Annual Research Report

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Published: 1988-04-01   Modified: 2016-04-21  

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