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Genetic control of biosynthesis, structural assembly and activity expression of eukaryotic pyruvate dehydrogenase

Research Project

Project/Area Number 63580156
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 代謝生物化学
Research InstitutionNagasaki University

Principal Investigator

KOIKE Masahiko  Nagasaki University, School of Medicine, Professor, 医学部, 教授 (10039521)

Co-Investigator(Kenkyū-buntansha) URATA Yoshishige  Nagasaki University, School of Medicine, Instructor, 医学部, 助手 (30185087)
KOIKE Kichiko  Nagasaki University, School of Medicine, Associate Professor, 医学部, 助教授 (80039619)
Project Period (FY) 1988 – 1989
Project Status Completed (Fiscal Year 1989)
Budget Amount *help
¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1989: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 1988: ¥1,300,000 (Direct Cost: ¥1,300,000)
Keywordspyruvate dehydrogenase (PDH) / alpha_2beta_2 subunit structure / PDHalpha, beta cDNAs / PDHalpha, beta mRNAs / biosynthesis / PDHalpha gene / PDHbeta gene / nucleotide sequences
Research Abstract

1. The cDNAs encoding human pyruvate dehydrogenase (PDH)alpha and beta subunits were isolated from a HeLa cell and human foreskin fibroblast cDNA libraries. They spans 1,363 base pairs (alpha) and 1,557 base pairs (beta), respectively, and encoded alpha precursor of 392 amino acid residues (Mr 43,414) and beta precursor of 359 residues (Mr 39,046), respectively. The amino acid sequences deduced from two cDNAs were highly homologous with those of mature porcine PDHalpha and beta. Two cDNA inserts subcloned into expression vector pTZ18R synthesized mRNAs identical with HeLa cell PDHalpha and betamRNAs in in vitro transcription system. Large scale synthesis of each subunit protein have been attempted by using two cDNAs constructed into prokaryotic expression vectors.
2. Genomic clones encompassing the entire gene for human PDHalpha has been isolated from a leukocyte genomic library. The PDHalpha gene spans 17,082 base pairs and is composed of 11 exons and 10 introns. A total of seven Alu repeats were found in five introns. The entire nucleotide sequence of the gene has been determined and typical consensus promoter sequences in the 5'-flanking region were found. Primer extension analysis indicated that transcription start site is a thymine residue 124 bases upstream from ATG codon in exon 1.
3. Genomic clones encompassing the entire gene for human PDHbeta has been isolated from a leukocyte genomic library constructed into lambdaEMBL3. The clone was characterized by restriction enzyme analysis, extensive DNA sequencing and primer extension analysis. The PDHbeta gene spans 18 kilobase pairs and is composed of 10 exons and 9 introns. Two Alu repeats were found in two introns. The 5'-flanking region of the gene contains CAAT box and 3 Spl binding sequences. The transcription was initiated with a adenine residue 132 bases upstream from the translation initiation codon in exon 1.

Report

(3 results)
  • 1989 Annual Research Report   Final Research Report Summary
  • 1988 Annual Research Report
  • Research Products

    (35 results)

All Other

All Publications (35 results)

  • [Publications] Kichiko Koike,S.Ohta,Y.Urata,Y.Kagawa,M.Koike: "Cloning and sequencing of cDNAs encoding α and β subunits of human pyruvate dehydrogenase" Proceeding of National Academy of Sciences of the United States of America. 85. 41-45 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Masahiko Koike,Y.Urata,K.Koike,A.Tsuji,M.Moriyasu: "Novel separation of component enzymes of pig heart pyruvate dehydrogenase complex by high-performance Liquid chromatography" Thiamin Pyrophosphate.Biochemistry. II. 37-43 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike: "Enzmatic studies of the genetic defect of pyruvate dehydrogenase in chronic pyruvic and lactic acidemia" Thimin Pyrophosphate Biochemistry. II. 105-113 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] 小池吉子、浦田芳重、小池正彦: "ヒトピルビン酸脱水素酵素遺伝子の構造解析" 生化学. 60. 861 (1988)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike,Y.Urata,M.Koike: "Molecular cloning of cDNAs for α and β subunits of human pyruvate dehydrogenase" Annals New York Academy of Sciences. 573. 100-112 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike,Y.Urata: "Chronic acidemia due to pyruvate dehydrogenase deficiency in pyruvate dehydrogenase complex,with evidence of abnormalities of α-and β-subunits of the enzyme" Annals New York Academy of Sciences. 573. 450-452 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] 小池吉子、浦田芳重、小池正彦: "ヒトピルビン酸脱水素酵素αサブユニット遺伝子の単離と構造解析" 生化学. 61. 842 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] 浦田芳重、石橋大海、小池吉子、小池正彦: "原発性胆汁肝硬変症の自己抗原一次構造と簡易診断法の開発" 生化学. 61. 914 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] 浦田芳重、小池吉子、小池正彦: "ヒトピルビン酸脱水素酵素αサブユニットの一次構造の比較生化学" 生化学. 61. 1139 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike,Y.Urata,S.Matsuo,M.Koike: "Characterization and nucleotide sequence of human pyruvate dehydrogenase α subunit gene" Gene.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike,Y.Urata,M.Koike: "Molecular cloning and characterization of human pyruvate dehydrogenase β subunit" Proceeding of National Academy of Sciences of the United States of America.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike, Shigeo Ohta, Yoshishige Urata, Yasuo Kagawa, Masahiko Koike.: "Cloning and sequencing of cDNAs encoding alpha and beta subunits of human pyruvate dehydrogenase." Proc. Natl. Acad. Sci. USA. 85(1). 41-45 (1988)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Masahiko Koike, Yoshishige Urata, Kichiko Koike, Akihiko Tsuji, Matsuko Moriyasu.: "Novel separation of the component enzymes of pig heart pyruvate dehydrogenase complex by high-performance liquid chromatography." Thiamin Pyrophosphate Biochemistry Vol.II, 37-43, 1988.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike: "Enzymatic studies of the genetic defect of pyruvate dehydrogenase in chronic pyruvic and lactic acidemia." Thiamin Pyrophosphate Biochemistry Vol.II, 105-113, 1988.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike, Yoshishige Urata, Masahiko Koike: "Characterization of human pyruvate dehydrogenase gene." Seikagaku 60, 861, 1988.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike, Yoshishige Urata, Masahiko Koike: "Molecular cloning of cDNAs for alpha and beta subunits of human pyruvate dehydrogenase." Ann. N.Y. Acad. Sci. 573, 100-112, 1989.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike, Yoshishige Urata: "Chronic acidemia due to a pyruvate dehydrogenase deficiency in pyruvate dehydrogenase complex, with abnormalities of the alpha and beta subunits of the enzyme." Ann. N.Y. Acad. Sci. 573, 450-452, 1989.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike, Yoshishige Urata, Masahiko Koike: "Molecular cloning and characterization of human pyruvate dehydrogenase alpha subunit gene." Seikagaku 61, 842, 1989.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Yoshishige Urata, Hiromi Ishibashi, Kichiko Koike, Masahiko Koike: "Primary structure of autoantigen and development of simple diagnosis method of primary biliary chirrhosis." Seikagaku 61, 914, 1989.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Yoshishige Urata, Kichiko Koike, Masahiko Koike: "Comparative biochemistry of primary structure of human pyruvate dehydrogenase alpha subunit" Seikagaku 61, 1139, 1989.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike, Yoshishige Urata, Sachiko Matsuo, Masahiko Koike: "Characterization and nucleotide sequence of human pyruvate dehydrogenase alpha subunit gene." Gene.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike, Yoshishige Urata, Masahiko Koike: "Molecular cloning and characterization of human pyruvate dehydrogenase beta subunit." Proc. Natl. Acad. Sci. USA.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1989 Final Research Report Summary
  • [Publications] Kichiko Koike,Yoshishige Urata,Masahiko Koike: "Molecular cloning of cDNAs for α and β subunits of human pyruvate dehydrogenase" Annals New York Academy of Sciences. 573. 100-112 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Kichiko Koike,Yoshishige Urata: "Chronic Acidemia due to Pyruvate dehydrogenase deficiency in pyruvate dehydrogenase complex,with evidence of abnormalities of α-and β-subunits of the enzyme" Annals New York Academy of Sciences. 573. 450-452 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] 小池吉子,浦田芳重,小池正彦: "ヒトピルビン酸脱水素酵素αサブユニット遺伝子の単離と構造解析" 生化学. 61. 842 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] 浦田芳重,石橋大海,小池吉子,小池正彦: "原発性胆汁性肝硬変症の自己抗原一次構造と簡易診断法の開発" 生化学. 61. 914 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] 浦田芳重,小池吉子,小池正彦: "ヒトピルビン酸脱水素酵素αサブユニットの一次構造の比較生化学" 生化学. 61. 1139 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Kichiko Koike,Yoshishige Urata,Sachiko Matsuo,Masahiko Koike: "Characterization and nucleotide sequence of human pyruvate dehydrogenase α subunit gene" Gene.

    • Related Report
      1989 Annual Research Report
  • [Publications] Kichiko Koike,Yoshishige Urata,Masahiko Koike: "Molecular cloning and characterization of human pyruvate dehydrogenase β subunit" Proceeding of National Academy of Sciences of the United States of America.

    • Related Report
      1989 Annual Research Report
  • [Publications] Kichiko Koike;S.Ohta;Y.Urata;Y.Kagawa;M.Koike: Proceedings of National Academy of Sciences of the United States of America. 85. 41-45 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Masahiko Koike;Y.Urata;K.Koike;A.Tsuji;M.Moriyasu: Thiamin Pyrophosphate Biochemistry. II. 37-43 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Kichiko Koike: Thiamin Pyrophosphate Biochemistry. II. 105-113 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] 小池吉子、浦田芳重、小池正彦: 生化学. 60. 861 (1988)

    • Related Report
      1988 Annual Research Report
  • [Publications] Kichiko Koike;Y.Urata;M.Koike: The New York Academy of Sciences.

    • Related Report
      1988 Annual Research Report
  • [Publications] Kichiko Koike;Y.Urata: The New York Academy of Sciences.

    • Related Report
      1988 Annual Research Report

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Published: 1988-04-01   Modified: 2016-04-21  

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