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Site-Selective Protein Chemical Modification of Exposed Tyrosine Residues Using Tyrosine Click Reaction

Publicly Offered Research

Project AreaNon-equilibrium-state molecular movies and their applications
Project/Area Number 20H05438
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Complex systems
Research InstitutionTokyo Institute of Technology

Principal Investigator

Maity Basudev  東京工業大学, 生命理工学院, 特任助教 (60815421)

Project Period (FY) 2020-04-01 – 2022-03-31
Project Status Completed (Fiscal Year 2021)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2021: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2020: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
KeywordsCO release reaction / Initial intermediate / TR-SFX method / Lysozyme / Serial crystallography / Lysozyme-Mn(CO)3 / CO photo-release
Outline of Research at the Start

Recently, using X-ray free electron laser (XFEL) , various dynamic processes associated with proteins have been elucidated. However, all such studies by serial femtosecond crystallography have been limited to only natural proteins and the methodology has not been applied tosynthetic organic molecules or metal complexes. In this work, we plan to establish a method to study process of a chemical reaction by serial crystallography. We will study the CO photo-release reaction from Lys-Mn(CO)3 composite and ring-closing-opening reaction of photochromic diarylethene molecules.

Outline of Annual Research Achievements

In this research, we demonstrated a visualization of photolysis reaction by a synthetic metal complex using TR-SFX method. We fixed a photoactive CO releasing Mn(CO)3 reaction center into porous Lysozyme microcrystals. X-ray crystal structure revealed an octahedral Mn reaction center with 3CO and two water molecules. Three CO ligands oriented in a facial manner. By controlling the time and light dose, we succeeded in determining the CO release process and structure of a bicarbonyl intermediate species in real-time. In addition, we performed quantum chemical calculations which was in good agreement with the experimental results. The demonstration has a great scope to explore the mechanism of difficult organic, inorganic, or synthetic metalloprotein reactions.

Research Progress Status

令和3年度が最終年度であるため、記入しない。

Strategy for Future Research Activity

令和3年度が最終年度であるため、記入しない。

Report

(2 results)
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • Research Products

    (4 results)

All 2021 2020

All Presentation (4 results)

  • [Presentation] Observation of a CO release reaction by time-resolved serial crystallography2021

    • Author(s)
      Basudev Maity
    • Organizer
      Molecular Movie area meeting.
    • Related Report
      2021 Annual Research Report
  • [Presentation] Observation of CO release reaction in a crystalline Lysozyme- Mn(CO)3 scaffold2021

    • Author(s)
      Basudev Maity
    • Organizer
      The 101th CSJ Annual Metting
    • Related Report
      2021 Annual Research Report
  • [Presentation] Observation of a CO release reaction in a crystalline Lysozyme-Mn(CO)3 scaffold2021

    • Author(s)
      Basudev Maity
    • Organizer
      The 101th CSJ Annual Metting
    • Related Report
      2020 Annual Research Report
  • [Presentation] Serial crystallographic observation of CO release reaction in a Lysozyme-Mn(CO)3 construct2020

    • Author(s)
      Basudev Maity
    • Organizer
      The 70th Conference of Japan Society of Coordination Chemistry
    • Related Report
      2020 Annual Research Report

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Published: 2020-04-28   Modified: 2022-12-28  

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