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Development of multicomponent molecular theories for accurate prediction and elucidation of hydrogen-functional mechanism

Publicly Offered Research

Project AreaHYDROGENOMICS: Creation of Innovative Materials, Devices, and Reaction Processes using Higher-Order Hydrogen Functions
Project/Area Number 21H00026
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Science and Engineering
Research InstitutionYokohama City University

Principal Investigator

立川 仁典  横浜市立大学, 生命ナノシステム科学研究科(八景キャンパス), 教授 (00267410)

Project Period (FY) 2021-04-01 – 2023-03-31
Project Status Completed (Fiscal Year 2022)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2022: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2021: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords多成分系量子化学手法 / 量子水素 / H/D同位体効果 / 低障壁水素結合
Outline of Research at the Start

材料中の水素が示す高次水素機能の発現機構解明および高精度予測のために、申請者が前回の公募研究で得られた成果をもとに、領域内でのさらなる共同研究に基づきこの課題に挑戦する。具体的には、多成分系量子化学計算手法の高度化として、階層的手法や、効率的サンプリング手法等の導入を行う。それにより、低障壁水素結合(LBHB)に着目した高次水素機能の発現機構解明および高精度予測に向け、分子性結晶や表面化学、さらには生体超分子に焦点を絞った大規模計算を実現する。その中でも特に本年度は、LBHBに起因する、金属表面における水素吸着の安定性や量子論的な吸着反応経路の解析を行う。

Outline of Annual Research Achievements

高次水素機能の発現機構解明および高精度予測を目指し、多成分系量子化学計算手法を高度化し、低障壁水素結合に着目した大規模計算を実現することを目標とした。この2年間で以下の研究項目を実現し、当該領域「ハイドロジェノミクス」の研究推進に貢献した。
研究項目1.多成分系量子化学計算システムに、拡張型ONIOM法を開発・実装し、実構造に近い計算を可能とした。具体的には、平面波基底と局在化基底の利点を組み合わせた「Combined Plane wave and Localized Basis-sets (CPLB)法」を開発し、金属表面上の局所的な高精度計算の可能性を示した。また、金属表面での構造緩和を取り込むために、CPLB法の枠組みにおいて構造最適化プログラムを実装した。本研究では吉信らのRh(111)に対するC6H12/C6D12吸着のH/D同位体効果の発現機構の解明に向け、CH4/CD4を例にとり吸着特性についての解析を行った。その結果、C-Rh(111)表面間距離はCD4の方が0.009Å長くなり、吉信らの吸着距離に対する実験報告と同様の傾向を示すことに成功した。
研究項目2.低障壁水素結合(LBHB)に着目した高次水素機能の発現機構解明および高精度予測にむけた大規模計算を実現した。森らの開発したLBHBを有するH3(Cat-EDT-TTF)2、およびその重水素置換化体に対する計算を実現し、さらには静電場を印加した計算を実現した。また、実験研究者との密な議論に基づいた高次水素機能の発現機構解明・予測、を行った。具体的には、公募研究B02の加藤先生が中心となり、計画研究A03-2の森先生と計画研究A04の吉信先生と共に、水素ー電子カップリング系2分子膜を「新発想」素子として開発する際に、理論計算の立場で共同研究を実施した。また、公募研究B02の川脇先生らの合成されたAu包接Ni多核錯体の理論計算を実施した。
なお、このような理論計算と実験科学との協奏により、2022年度第9回HPCI利用研究課題優秀成果賞を受賞した。

Research Progress Status

令和4年度が最終年度であるため、記入しない。

Strategy for Future Research Activity

令和4年度が最終年度であるため、記入しない。

Report

(2 results)
  • 2022 Annual Research Report
  • 2021 Annual Research Report
  • Research Products

    (44 results)

All 2023 2022 2021 Other

All Int'l Joint Research (2 results) Journal Article (28 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 28 results,  Open Access: 7 results) Presentation (11 results) (of which Int'l Joint Research: 8 results,  Invited: 9 results) Remarks (1 results) Funded Workshop (2 results)

  • [Int'l Joint Research] チェンマイ大学/ウボンラチャタニ大学(タイ)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] チェンマイ大学/ウボンラチャタニ大学(タイ)

    • Related Report
      2021 Annual Research Report
  • [Journal Article] Theoretical investigations of positron affinities and their structure-dependent properties of carbon dioxide clusters (CO2)n(n=1~5)2023

    • Author(s)
      Miku Furushima, Makito Takagi, Daisuke Yoshida, Yukiumi Kita, Tomomi Shimazaki and Masanori Tachikawa
    • Journal Title

      Physical Chemistry Chemical Physics

      Volume: 25 Issue: 1 Pages: 625-632

    • DOI

      10.1039/d2cp03788b

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Improved activity for the oxygen evolution reaction using a tiara-like thiolate-protected nickel nanocluster2023

    • Author(s)
      Funaki Sota、Kawawaki Tokuhisa、Okada Tomoshige、Takemae Kana、Hossain Sakiat、Niihori Yoshiki、Naito Takumi、Takagi Makito、Shimazaki Tomomi、Kikkawa Soichi、Yamazoe Seiji、Tachikawa Masanori、Negishi Yuichi
    • Journal Title

      Nanoscale

      Volume: 15 Issue: 11 Pages: 5201-5208

    • DOI

      10.1039/d2nr06952k

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Development of anharmonic vibrational structure theory using backflow transformation2022

    • Author(s)
      Ishii Kiriko、Shimazaki Tomomi、Tachikawa Masanori、Kita Yukiumi
    • Journal Title

      Chemical Physics Letters

      Volume: 787 Pages: 139263-139263

    • DOI

      10.1016/j.cplett.2021.139263

    • Related Report
      2022 Annual Research Report 2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ambipolar to unipolar irreversible switching in nanosheet transistors: the role of ferrocene in fullerene/ferrocene nanosheets2022

    • Author(s)
      Mahdaoui Dorra、Hirata Chika、Nagaoka Kahori、Miyazawa Kun’ichi、Fujii Kazuko、Ando Toshihiro、Abderrabba Manef、Ito Osamu、Takagi Makito、Ishimoto Takayoshi、Tachikawa Masanori、Yagyu Shinjiro、Liu Yubin、Nakajima Yoshiyuki、Nemoto Yoshihiro、Tsukagoshi Kazuhito、Wakahara Takatsugu
    • Journal Title

      Journal of Materials Chemistry C

      Volume: 10 Issue: 10 Pages: 3770-3774

    • DOI

      10.1039/d1tc05545c

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Hydrogen/Deuterium Transfer from Anisole to Methoxy Radicals: A Theoretical Study of a Deuterium-Labeled Drug Model2022

    • Author(s)
      Kimura Yuka、Kanematsu Yusuke、Sakagami Hiroki、Rivera Rocabado David S.、Shimazaki Tomomi、Tachikawa Masanori、Ishimoto Takayoshi
    • Journal Title

      The Journal of Physical Chemistry A

      Volume: 126 Issue: 1 Pages: 155-163

    • DOI

      10.1021/acs.jpca.1c08514

    • Related Report
      2022 Annual Research Report 2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Atomic mass dependence of the nuclear quantum effect in NH4+(H2O)2022

    • Author(s)
      Kuwahata Kazuaki、Tachikawa Masanori
    • Journal Title

      Chemical Physics

      Volume: 553 Pages: 111381-111381

    • DOI

      10.1016/j.chemphys.2021.111381

    • Related Report
      2022 Annual Research Report 2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Spontaneous radiative dissociation of the second bound state of positronium hydride2022

    • Author(s)
      Yamashita Takuma、Hiyama Emiko、Yoshida Daisuke、Tachikawa Masanori
    • Journal Title

      Physical Review A

      Volume: 105 Issue: 1 Pages: 012814-012814

    • DOI

      10.1103/physreva.105.012814

    • Related Report
      2022 Annual Research Report 2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Competitive nuclear quantum effect and H/D isotope effect on torsional motion of H2O2: An ab initio path integral molecular dynamics study2022

    • Author(s)
      Udagawa Taro、Kuwahata Kazuaki、Tachikawa Masanori
    • Journal Title

      Computational and Theoretical Chemistry

      Volume: 1208 Pages: 113542-113542

    • DOI

      10.1016/j.comptc.2021.113542

    • Related Report
      2022 Annual Research Report 2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical Study of the Isotope and Homologue Effects on Nuclear Magnetic Shielding in Water and Hydrogen Sulfide Molecules2022

    • Author(s)
      Ishii Kiriko、Shimazaki Tomomi、Tachikawa Masanori、Kita Yukiumi
    • Journal Title

      Chemistry Letters

      Volume: 51 Issue: 3 Pages: 342-344

    • DOI

      10.1246/cl.210760

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Collaborative Approach between Explainable Artificial Intelligence and Simplified Chemical Interactions to Explore Active Ligands for Cyclin-Dependent Kinase 22022

    • Author(s)
      Shimazaki Tomomi、Tachikawa Masanori
    • Journal Title

      ACS Omega

      Volume: 7 Issue: 12 Pages: 10372-10381

    • DOI

      10.1021/acsomega.1c06976

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Low-Barrier Hydrogen Bond in Fujikurin A?D: A Computational Study2022

    • Author(s)
      Tanaka Hikaru、Kuwahata Kazuaki、Tachikawa Masanori、Udagawa Taro
    • Journal Title

      ACS Omega

      Volume: 7 Issue: 16 Pages: 14244-14251

    • DOI

      10.1021/acsomega.2c00857

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nuclear quantum effect and H/D isotope effect in excited state intramolecular proton transfer and electron‐induced intramolecular proton transfer reactions in 8‐hydroxyquinoline2022

    • Author(s)
      Udagawa Taro、Hattori Ikumi、Kanematsu Yusuke、Ishimoto Takayoshi、Tachikawa Masanori
    • Journal Title

      International Journal of Quantum Chemistry

      Volume: 122 Issue: 19

    • DOI

      10.1002/qua.26962

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fullerene C70 porphyrin hybrid nanoarchitectures: single-cocrystal nanoribbons with ambipolar charge transport properties2022

    • Author(s)
      Wakahara Takatsugu、Nagaoka Kahori、Hirata Chika、Miyazawa Kun'ichi、Fujii Kazuko、Matsushita Yoshitaka、Ito Osamu、Takagi Makito、Shimazaki Tomomi、Tachikawa Masanori、Wada Yoshiki、Yagyu Shinjiro、Liu Yubin、Nakajima Yoshiyuki、Tsukagoshi Kazuhito
    • Journal Title

      RSC Advances

      Volume: 12 Issue: 30 Pages: 19548-19553

    • DOI

      10.1039/d2ra02669d

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A path integral molecular dynamics study on the NH<sub>4</sub><sup>+</sup> rotation in NH<sub>4</sub><sup>+</sup>?XH<sub>2</sub> (X = Be or Mg) dihydrogen bond systems2022

    • Author(s)
      Udagawa Taro、Kinoshita Amane、Kuwahata Kazuaki、Tachikawa Masanori
    • Journal Title

      Physical Chemistry Chemical Physics

      Volume: 24 Issue: 28 Pages: 17295-17302

    • DOI

      10.1039/d2cp01999j

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical study of the effect of nonlocal short-range exchange on calculations of molecular excitation energies in the dielectric screened-exchange method2022

    • Author(s)
      Shimazaki Tomomi、Tachikawa Masanori
    • Journal Title

      Chemical Physics Letters

      Volume: 802 Pages: 139740-139740

    • DOI

      10.1016/j.cplett.2022.139740

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A comprehensive theoretical study of positron binding and annihilation properties of hydrogen bonded binary molecular clusters2022

    • Author(s)
      Daisuke Yoshida, Yukiumi Kita, Tomomi Shimazaki, Masanori Tachikawa
    • Journal Title

      Physical Chemistry Chemical Physics

      Volume: 24(43) Issue: 43 Pages: 26898-26907

    • DOI

      10.1039/d2cp03813g

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Decomposition analysis on the excitation behaviors of thiazolothiazole (TTz)-based dyes <i>via</i> the time-dependent dielectric density functional theory approach2022

    • Author(s)
      Naito Takumi、Kita Yukiumi、Shimazaki Tomomi、Tachikawa Masanori
    • Journal Title

      RSC Advances

      Volume: 12 Issue: 53 Pages: 34685-34693

    • DOI

      10.1039/d2ra06454e

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Molecular Dynamics Study on the Structure-Property Relationship of Self-Assembled Gear-Shaped Amphiphile Molecules with/without Methyl Groups2022

    • Author(s)
      Murata Moe、Koide Takuya、Kobayashi Osamu、Hiraoka Shuichi、Shimazaki Tomomi、Tachikawa Masanori
    • Journal Title

      The Journal of Physical Chemistry B

      Volume: 127 Issue: 1 Pages: 328-334

    • DOI

      10.1021/acs.jpcb.2c07444

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical study of the H/D isotope effect of CH4/CD4 adsorption on a Rh(111) surface using a combined plane wave and localized basis sets method2021

    • Author(s)
      Sakagami Hiroki、Tachikawa Masanori、Ishimoto Takayoshi
    • Journal Title

      RSC Advances

      Volume: 11 Issue: 17 Pages: 10253-10257

    • DOI

      10.1039/d0ra10796d

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Metal-doped carbon nanocones as highly efficient catalysts for hydrogen storage: Nuclear quantum effect on hydrogen spillover mechanism2021

    • Author(s)
      Yodsin Nuttapon、Sakagami Hiroki、Udagawa Taro、Ishimoto Takayoshi、Jungsuttiwong Siriporn、Tachikawa Masanori
    • Journal Title

      Molecular Catalysis

      Volume: 504 Pages: 111486-111486

    • DOI

      10.1016/j.mcat.2021.111486

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] H/D Isotope Effects in Keto-Enol Tautomerism of β-Dicarbonyl Compounds: Importance of Nuclear Quantum Effects of Hydrogen Nuclei2021

    • Author(s)
      Udagawa Taro、Murphy Rhys B.、Darwish Tamim A.、Tachikawa Masanori、Mori Seiji
    • Journal Title

      Bulletin of the Chemical Society of Japan

      Volume: 94 Issue: 7 Pages: 1954-1962

    • DOI

      10.1246/bcsj.20210083

    • NAID

      130008076866

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Theoretical investigation of the enhancement of positron affinity by the vibration and dimerization of non-polar carbon disulfide2021

    • Author(s)
      Furushima Miku、Yoshida Daisuke、Kita Yukiumi、Shimazaki Tomomi、Tachikawa Masanori
    • Journal Title

      Physical Chemistry Chemical Physics

      Volume: 23 Issue: 38 Pages: 21512-21520

    • DOI

      10.1039/d1cp02808a

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A theoretical study on solvatofluorochromic asymmetric thiazolothiazole (TTz) dyes using dielectric-dependent density functional theory2021

    • Author(s)
      Shimazaki Tomomi、Tachikawa Masanori
    • Journal Title

      Physical Chemistry Chemical Physics

      Volume: 23 Issue: 37 Pages: 21078-21086

    • DOI

      10.1039/d1cp02047a

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] H/D isotope effect between adsorbed water (H2O, D2O, and HDO) and H2O- and D2O-ice Ih(0001) basal surfaces based on the combined plane wave and localized basis set method2021

    • Author(s)
      Ishimoto Takayoshi、Sakagami Hiroki、Kanematsu Yusuke、Tachikawa Masanori
    • Journal Title

      Applied Surface Science

      Volume: 561 Pages: 150100-150100

    • DOI

      10.1016/j.apsusc.2021.150100

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical Study For Positron Binding and Annihilation of Alcohol Clusters2021

    • Author(s)
      Tachikawa Masanori、Yoshida Daisuke
    • Journal Title

      Few-Body Systems

      Volume: 62 Issue: 3 Pages: 48-53

    • DOI

      10.1007/s00601-021-01636-x

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Positron Binding and Annihilation Properties of Amino Acid Systems2021

    • Author(s)
      Ozaki Maya、Yoshida Daisuke、Kita Yukiumi、Shimazaki Tomomi、Tachikawa Masanori
    • Journal Title

      ACS Omega

      Volume: 6 Issue: 44 Pages: 29449-29458

    • DOI

      10.1021/acsomega.1c03409

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Path Integral Molecular Dynamics Study on NH4+(H2O)2021

    • Author(s)
      Kuwahata Kazuaki、Tachikawa Masanori
    • Journal Title

      Few-Body Systems

      Volume: 62 Issue: 4 Pages: 96-102

    • DOI

      10.1007/s00601-021-01689-y

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Contribution of vibrational overtone excitations to positron annihilation rates for benzene and naphthalene2021

    • Author(s)
      R. Iida, H. Suzuki, T. Takayanagi, M. Tachikawa
    • Journal Title

      Phys. Rev. A

      Volume: 104 Issue: 6

    • DOI

      10.1103/physreva.104.062807

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Presentation] Quantum Multi-Component Molecular Theory for H-Bonded System and its H/D Isotope Effect2023

    • Author(s)
      Masanori Tachikawa
    • Organizer
      J-PARC Workshop 2022, Deuterium Science to Entering a New Phase
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Path integral simulation for H/D isotope effect in protonated/deuterated aqueous solution2023

    • Author(s)
      Masanori Tachikawa
    • Organizer
      Asia Pacific Conference of Theoretical and Computational Chemistry (APATCC-10)
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Theoretical study on positron binding to atomic anion dimers: using first-principles Quantum Monte Carlo2022

    • Author(s)
      Masanori Tachikawa
    • Organizer
      19th International Conference on Positron Annihilation (ICPA19)
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Positron Binding in Molecules2022

    • Author(s)
      Masanori Tachikawa
    • Organizer
      75th Annual Gaseous Electronics Conference (GEC2022)
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Theoretical study on positron binding to atomic anion dimers: using first-principles Quantum Monte Carlo2022

    • Author(s)
      Masanori Tachikawa
    • Organizer
      第24回理論化学討論会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Muon and Positron Binding to Molecules2022

    • Author(s)
      Masanori Tachikawa
    • Organizer
      7th International Symposium of Quantum Beam Science
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Ab initio study of the effect of molecular vibrations on the positron-binding to polyatomic molecules2021

    • Author(s)
      Masanori Tachikawa
    • Organizer
      The 8th Asia-Pacific Conference on Few-Body Problems in Physics (APFB2020)
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] エキゾチック分子の量子化学2021

    • Author(s)
      立川仁典
    • Organizer
      IQCE量子化学探索講演会2021「量子化学で探る化学の最先端」
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 水素の量子ゆらぎを考慮した第一原理分子理論の構築と重水素化学への展開2021

    • Author(s)
      立川仁典
    • Organizer
      計算で物事を理解する予測する~産業界の実問題に立ち向かうサイエンス~
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Multi-component density functional theory study of H/D isotope effect on phase transition of hydrogen-bonded organic conductor κ-H3(Cat-EDT-TTF)22021

    • Author(s)
      Masanori Tachikawa
    • Organizer
      MRM2021 Materials Research Meeting
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Quantum Monte Carlo calculation on the effect of molecular vibrations for the positron-binding to polyatomic molecules2021

    • Author(s)
      Masanori Tachikawa
    • Organizer
      PACIFICHEM 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Remarks] 横浜市立大学量子物理化学研究室(立川・島崎・北グループ)

    • URL

      http://www-user.yokohama-cu.ac.jp/~tachi/index.html

    • Related Report
      2022 Annual Research Report 2021 Annual Research Report
  • [Funded Workshop] 7th Japan-Thai workshop on Theoretical and Computational Chemistry 2022, Yokohama2022

    • Related Report
      2022 Annual Research Report
  • [Funded Workshop] 6th Japan-Thai Workshop on Theoretical and Computational Chemistry・横浜(オンライン開催)2021

    • Related Report
      2021 Annual Research Report

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Published: 2021-04-28   Modified: 2023-12-25  

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