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2011 Fiscal Year Final Research Report

Study of membrane binding protein complex using total internal reflection fluorescence correlation spectroscopy

Planned Research

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Project AreaProtein community: organization and maintenance of protein functions
Project/Area Number 19058001
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionHokkaido University

Principal Investigator

KINJO Masataka  北海道大学, 大学院・先端生命科学研究院, 教授 (70177971)

Co-Investigator(Kenkyū-buntansha) MIKUNI Shintaro  北海道大学, 大学院・医学研究科, 特任助教 (40435954)
KITAMURA Akira  北海道大学, 大学院・先端生命科学研究院, 助教 (10580152)
Project Period (FY) 2007 – 2011
Keywords生物物理 / 生体分子 / 蛍光測定 / 分子集合体 / 一分子検出 / 凝集タンパク質
Research Abstract

The functional molecules move around in the cell and interact with other molecules, and then support higher function of the cell. Moreover, even aggregate prone protein acts as aggregate and disaggregate under specific condition, so that each element of these aggregate protein is exchanged with free its molecules in solution. FCS (fluorescence correlation spectroscopy) detects the fluorescence fluctuations, the diffusion coefficient, molecular concentration and molecular interactions of molecules. We developed a multipoint FCS system which was based on an objective-type total internal reflection-FCS (TIR-FCS) in order to analysis molecular interaction in living cell and system of protein community.

  • Research Products

    (43 results)

All 2012 2011 2010 2009 2008 2007 Other

All Journal Article (19 results) (of which Peer Reviewed: 19 results) Presentation (15 results) Book (7 results) Remarks (2 results)

  • [Journal Article] A Small Peptide Sequence is Sufficient for Initiating Kinesin-1 Activation Through Part of TPR Region of KLC12012

    • Author(s)
      Kawano T, Araseki M, Araki Y, Kinjo M, Yamamoto T, Suzuki T.
    • Journal Title

      Traffic

      Volume: (Epub ahead of print)

    • DOI

      DOI:10.1111/j.1600-0854.2012.01350.x

    • Peer Reviewed
  • [Journal Article] A modified FCCS procedure applied to Ly49A-MHC class I cis-interaction studies in cell membranes2011

    • Author(s)
      Stromqvist J, Johansson S, Xu L, Ohsugi Y, Andersson K, Muto H, Kinjo M, Hoglund P, Widengren J.
    • Journal Title

      Biophys J.

      Volume: 101(5) Pages: 1257-1269

    • DOI

      DOI:10.1016/j.bpj.2011.06.057

    • Peer Reviewed
  • [Journal Article] Intracellular pH sensing using autofluorescence lifetime microscopy2011

    • Author(s)
      Ogikubo S, Nakabayashi T, Adachi T, Islam MS, Yoshizawa T, Kinjo M, Ohta N.
    • Journal Title

      J Phys Chem B.

      Volume: 115(34) Pages: 10385-10390

    • DOI

      DOI:10.1021/jp2058904

    • Peer Reviewed
  • [Journal Article] Importance of sialic acid residues illuminated by live animal imaging using phosphorylcholine self-assembled monolayer-coated quantum dots2011

    • Author(s)
      Ohyanagi T, Nagahori N, Shimawaki K, Hinou H, Yamashita T, Sasaki A, Jin T, Iwanaga T, Kinjo M, Nishimura S.
    • Journal Title

      J Am Chem Soc.

      Volume: 133(32) Pages: 12507-12517

    • DOI

      DOI:10.1021/ja111201c

    • Peer Reviewed
  • [Journal Article] Direct observation of dimerization between different CREB1 isoforms in a living cell2011

    • Author(s)
      Sadamoto H, Saito K, Muto H, Kinjo M, Ito E.
    • Journal Title

      PLoS One

      Volume: 6(6)(Epub) Pages: e20285

    • DOI

      DOI:10.1371/journal.pone.0020285

    • Peer Reviewed
  • [Journal Article] Two distinct amyloid {beta}-protein(A{beta}) assembly pathways leading to oligomers and fibrils identified by combined fluorescence correlation spectroscopy, morphology and toxicity analyses2011

    • Author(s)
      Matsumura S, Shinoda K, et al.
    • Journal Title

      J Biol Chem.

      Volume: 286(13) Pages: 11555-11562

    • DOI

      DOI:10.1074/jbc.M110.181313

    • Peer Reviewed
  • [Journal Article] Analyzing the aggregation of polyglutamine-expansion proteins and its modulation by molecular chaperones2011

    • Author(s)
      Kubota H, Kitamura A, Nagata K.
    • Journal Title

      Methods

      Volume: 53(3) Pages: 267-274

    • DOI

      DOI:10.1016/j.ymeth.2010.12.035

    • Peer Reviewed
  • [Journal Article] Single-particle tracking of quantum dot-conjugated prion proteins inside yeast cells2011

    • Author(s)
      Tsuji T, Kawai-Noma S, Pack CG, Terajima H, Yajima J, Nishizaka T, Kinjo M, Taguchi H.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 405(4) Pages: 638-643

    • DOI

      DOI:10.1016/j.bbrc.2011.01.083

    • Peer Reviewed
  • [Journal Article] Monitoring the caspase cascade in single apoptotic cells using a three-color fluorescent protein substrate2011

    • Author(s)
      Sun F, Mikuni S, Kinjo M.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 404(2) Pages: 706-710

    • Peer Reviewed
  • [Journal Article] Dynamic assembly properties of nonmuscle myosin II isoforms revealed by combination of fluorescence correlation spectroscopy and fluorescence cross-correlation spectroscopy2011

    • Author(s)
      Mitsuhashi M, Sakata H, Kinjo M, Yazawa M, Takahashi M.
    • Journal Title

      J Biochem.

      Volume: 149(3) Pages: 253-263

    • DOI

      DOI:10.1093/jb/mvq134

    • Peer Reviewed
  • [Journal Article] Simultaneous measurement of the caspase-3 and caspase-9 activities during induced apoptosis by fluorescence cross-correlation spectroscopy2010

    • Author(s)
      Sun F, Mikuni S, Kinjo M.
    • Journal Title

      Bioimages

      Volume: 18 Pages: 1-9

    • URL

      https://www.jstage.jst.go.jp/article/bioimages/18/0/18_0_1/_article

    • Peer Reviewed
  • [Journal Article] STPR, a 23-amino acid tandem repeat domain, found in the human function-unknown protein ZNF8212010

    • Author(s)
      Nonaka Y, Muto H, Aizawa T, Okabe E, Myoba S, Yokoyama T, Saito S, Tatami F, Kumaki Y, Kamiya M, Kikukawa T, Mizuguchi M, Takiya S, Kinjo M, Demura M, Kawano K.
    • Journal Title

      Biochemistry

      Volume: 49(38) Pages: 8367-8375

    • DOI

      DOI:10.1021/bi100448f

    • Peer Reviewed
  • [Journal Article] In vivo evidence for the fibrillar structures of Sup35 prion in yeast cells2010

    • Author(s)
      Kawai-Noma S, Pack CG, Kojidani T, Asakawa H, Hiraoka Y, Kinjo M, Haraguchi T, Taguchi H, Hirata A.
    • Journal Title

      J Cell Biol.

      Volume: 190(2) Pages: 223-231

    • DOI

      DOI:10.1083/jcb.201002149

    • Peer Reviewed
  • [Journal Article] Monitoring intracellular dagradation of exogenous DNA using diffusion properties2010

    • Author(s)
      Sasaki A, Kinjo M.
    • Journal Title

      J Control Release

      Volume: 143(1) Pages: 104-111

    • DOI

      DOI:10.1016/j.jconrel.2009.12.013

    • Peer Reviewed
  • [Journal Article] Single mother-daughter pair analysis to clarify the diffusion properties of yeast prion Sup35 in guanidine-HCI-treated [PSI] cells2009

    • Author(s)
      Kawai-Noma S, Pack CG, Tsuji T, Kinjo M, Taguchi H.
    • Journal Title

      Genes Cells

      Volume: 14(9) Pages: 1045-1054

    • DOI

      DOI:10.1111/j.1365-2443.2009.01333.x

    • Peer Reviewed
  • [Journal Article] Multipoint fluorescence correlation spectroscopy with total internal reflection fluorescence microscope2009

    • Author(s)
      Ohsugi Y, Kinjo M.
    • Journal Title

      J Biomed Opt.

      Volume: 14(1) Pages: 014030

    • DOI

      DOI:10.1117/1.3080723

    • Peer Reviewed
  • [Journal Article] The A-and B-type nuclear lamin networks: microdomains involved in chromatin organization and transcription2008

    • Author(s)
      Shimi T, Pfleghaar K, Kojima S, Pack CG, Solovei I, Goldman AE, Adam SA, Shumaker DK, Kinjo M, Cremer T, Goldman RD.
    • Journal Title

      Genes Dev.

      Volume: 22(24) Pages: 3409-3421

    • DOI

      DOI:10.1101/gad.1735208

    • Peer Reviewed
  • [Journal Article] Reciprocal interaction with G-actin and tropomyosin is essential for aquaporin-2 trafficking2008

    • Author(s)
      Noda Y, Horikawa S, Kanda E, Yamashita M, Meng H, Eto K, Li Y, Kuwahara M, Hirai K, Pack C, Kinjo M, Okabe S, Sasaki S.
    • Journal Title

      J Cell Biol.

      Volume: 182(3) Pages: 587-601

    • DOI

      DOI:10.1083/jcb.200709177

    • Peer Reviewed
  • [Journal Article] Regulated motion of glycoproteins revealed by direct visualization of a single cargo in the endoplasmic reticulum2008

    • Author(s)
      Nagaya H, Tamura T, Higa-Nishiyama A, Ohashi K, Takeuchi M, Hashimoto H, Hatsuzawa K, Kinjo M, Okada T, Wada I.
    • Journal Title

      J Cell Biol.

      Volume: 180(1) Pages: 129-143

    • DOI

      DOI:10.1083/jcb.200704078

    • Peer Reviewed
  • [Presentation] 蛍光相関分光法とイメージングを用いたタンパク質凝集過程の研究2012

    • Author(s)
      金城政孝
    • Organizer
      神戸大学先端融合科学シンポジウム「タンパク質アセンブリ~会合、超分子化、凝集~」
    • Place of Presentation
      神戸大学
    • Year and Date
      2012-02-01
  • [Presentation] 多点蛍光相関分光測定による生細胞観察2012

    • Author(s)
      金城政孝
    • Organizer
      レーザー学会学術講演会第32回年次大会
    • Place of Presentation
      TKP仙台カンファレンスセンター
    • Year and Date
      2012-01-30
  • [Presentation] Biomolecular Dynamics in Living Cell Using Multipoint Fluorescence Correlation Spectroscopy2011

    • Author(s)
      Masataka Kinjo
    • Organizer
      The 13th Takayanagi Kenjiro memorial Symposium
    • Place of Presentation
      静岡大学
    • Year and Date
      2011-11-18
  • [Presentation] 蛍光相関分光法と超解像顕微鏡法を用いたタンパク質凝集過程の研究2011

    • Author(s)
      金城政孝
    • Organizer
      第4回タンパク質の異常凝集とその防御・修復機構に関する研究会
    • Place of Presentation
      京都大学原子炉実験所
    • Year and Date
      2011-11-10
  • [Presentation] 多点蛍光相関分光装置の構築と細胞内測定2010

    • Author(s)
      金城政孝
    • Organizer
      第3回タンパク質の異常凝集とその防御・修復機能に関する研究会
    • Place of Presentation
      京都大学原子炉実験所
    • Year and Date
      2010-11-12
  • [Presentation] Study of molecular complexes in live cell using multipoint temporal and spatial correlation spectroscopy analysis2010

    • Author(s)
      Masataka Kinjo
    • Organizer
      13^<th> Carl Zeiss Sponsored International Workshop on FCS and Related Methods
    • Place of Presentation
      The National University of Singapore
    • Year and Date
      2010-10-26
  • [Presentation] Study of molecular interaction in live cell using multipoint temporal and spatial correlation spectroscopy analysis2010

    • Author(s)
      Masataka Kinjo
    • Organizer
      The 3^<th> International Symposium on Protein Community
    • Place of Presentation
      Hotel Nikko Nara
    • Year and Date
      2010-09-16
  • [Presentation] Cell membrane-binding proteins analyzed by multi-point total internal reflection fluorescence correlation spectroscopy2010

    • Author(s)
      Masataka Kinjo
    • Organizer
      Japan-Korea Workshop of FCS and FCCS
    • Place of Presentation
      Korea Advanced Institute of Science and Technology
    • Year and Date
      2010-08-27
  • [Presentation] 生細胞におけるタンパク質社会のイメージングに向けて2010

    • Author(s)
      金城政孝
    • Organizer
      第10回日本蛋白質学会年会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2010-06-16
  • [Presentation] 蛍光相関分光法を用いた蛋白質凝集過程の研究2009

    • Author(s)
      金城政孝
    • Organizer
      第2回タンパク質の異常凝集とその防御・修復機構に関する研究会
    • Place of Presentation
      京都大学原子炉実験所
    • Year and Date
      2009-11-13
  • [Presentation] 蛍光相関分光法を用いた細胞機能解析2009

    • Author(s)
      金城政孝
    • Organizer
      第31回光医学光生物学会
    • Place of Presentation
      梅田スカイビル
    • Year and Date
      2009-07-24
  • [Presentation] Membrane-binding proteins analyzed by multipoint total internal reflection fluorescence correlation spectroscopy2009

    • Author(s)
      Masataka Kinjo
    • Organizer
      International Symposium "Frontier-Immuno-Imaging"
    • Place of Presentation
      Osaka University
    • Year and Date
      2009-05-11
  • [Presentation] Dybamic Aspects of Protein in Living Cell Investigated by Total Internal Reflection Fluourescence Correlation Spectroscopy2008

    • Author(s)
      Masataka Kinjo
    • Organizer
      International Congress on Cell Biology
    • Place of Presentation
      COEX Inter Continental Seoul
    • Year and Date
      2008-10-09
  • [Presentation] 蛍光相関分光法を利用した in vivo分子間相互作用解析2007

    • Author(s)
      金城政孝
    • Organizer
      第30回日本分子生物学会年会・第80回日本生化学会大会合同大会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2007-12-13
  • [Presentation] 蛍光相関分光法によるタンパク質の機能解析2007

    • Author(s)
      金城政孝
    • Organizer
      第59回日本細胞生物学会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2007-05-29
  • [Book] 生細胞における蛍光相関分光分析(ぶんせき4(436))2011

    • Author(s)
      金城政孝
    • Total Pages
      221-228
  • [Book] First Steps for Fluorescence Correlation Spectroscopy of Living Cells(Live Cell Imaging -A Laboratory Manual- Edited by Goldman R, Swedolow J, Spector D.)2010

    • Author(s)
      Kinjo M, Sakata H, Mikuni S.
    • Total Pages
      229-238
    • Publisher
      Cold Spring Harbor Laboratory Press
  • [Book] 蛍光相関法によるタンパク質の機能解析(生化学82(12))2010

    • Author(s)
      金城政孝
    • Total Pages
      1103-1116
  • [Book] 蛍光ゆらぎ測定による細胞の機能解析~蛍光相関イメージング,夜明け前(蛋白質核酸酵素54)2009

    • Author(s)
      金城政孝
    • Total Pages
      1218-1223
  • [Book] 相互作用の定量化:イメージングと蛍光相関分光法(科学と生物45)2007

    • Author(s)
      金城政孝
    • Total Pages
      570-756
  • [Book] FCCSによるタンパク質相互作用解析(別冊 分子間相互作用解析ハンドブック)2007

    • Author(s)
      三國新太郎、小暮貴子、宮脇敦史、金城政孝
    • Total Pages
      90-95
  • [Book] 蛍光相関分光法(FCS)の基礎(生細胞蛍光イメージング顕微鏡コースブック)2007

    • Author(s)
      金城政孝
    • Total Pages
      101-109
    • Publisher
      共立出版
  • [Remarks] 研究室ホームページ

    • URL

      http://www.lfsci.hokudai.ac.jp/labs/infmcd/index.html

  • [Remarks] NHKサイエンス・ゼロに出演(金城、北村、三國) 2009年2月14日(土曜日)タンパク質凝集を生細胞で測定するための意義と,病気との関連について解説した。

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Published: 2013-07-31  

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