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2012 Fiscal Year Final Research Report

Regulation of germ line function and development by genome imprinting

Planned Research

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Project AreaThe germline: its developmental cycle and epigenome network
Project/Area Number 20062009
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionTokyo University of Agriculture

Principal Investigator

KONO Tomohiro  東京農業大学, 応用生物科学部, 教授 (80153485)

Co-Investigator(Renkei-kenkyūsha) OBATA Yayoi  東京農業大学, 応用生物科学部, 准教授 (70312907)
OGAWA Hidehiko  東京農業大学, 応用生物科学部, 准教授 (20339089)
Project Period (FY) 2008 – 2012
Keywordsゲノムインプリント / 二母性胚 / 遺伝子発現 / 個体発生 / 非翻訳RNA
Research Abstract

We showed novel findings that imprint gene clusters, including the non-cording RNAs, in the Igf2-H19 domain of the chromosome 7 and the Dlk1-Dio3 domain of the chromosome 12, play a decisive role for embryogenesis and placentation. In addition, we provided comprehensive and single resolution DNA methylome data of germ cells, and also we showed particular functions of maternal genome on embryogenesis in cloned embryos and trophoblastic stem cells.

  • Research Products

    (40 results)

All 2013 2012 2011 2010 2009 2008 2007 2004 Other

All Journal Article (15 results) (of which Peer Reviewed: 15 results) Presentation (14 results) Book (2 results) Remarks (1 results) Patent(Industrial Property Rights) (8 results) (of which Overseas: 4 results)

  • [Journal Article] Mouse oocyte methylomes at base resolution reveal genome- wide accumulation of non-CpG methylation and role of DNA methyltransferases2013

    • Author(s)
      Shirane K, Toh H, Kobayashi H, Miura F, Chiba H, Ito T, Kono T, Sasaki H
    • Journal Title

      PLoS Genet

      Volume: 9(4) Pages: e1003439

    • DOI

      doi:10.1371/journal.pgen.1003439

    • Peer Reviewed
  • [Journal Article] The transcriptomic architecture of mouse Sertoli cell clone embryos reveals temporal.spatial-specific reprogramming2013

    • Author(s)
      Cao F, Fukuda A, Watanabe H, Kono T
    • Journal Title

      Reproduction

      Volume: 145(3) Pages: 277-288

    • Peer Reviewed
  • [Journal Article] Contribution of intragenic DNA methylation in mouse gametic DNA methylomes to establish oocyte-specific heritable marks2012

    • Author(s)
      Kobayashi H, Sakurai T, Imai M, Takahashi N, Fukuda A, Yayoi O, Sato S, Nakabayashi K, Hata K, Sotomaru Y, Suzuki Y, Kono T
    • Journal Title

      PLoS Genet

      Volume: 8(1) Pages: e1002440

    • DOI

      doi:10.1371/journal.pgen.1002440

    • Peer Reviewed
  • [Journal Article] Porcine nuclei in early growing stage do not possess meiotic competence in matured oocytes2012

    • Author(s)
      Ogawa H, Matsuzaki T, Yamamoto A, Kashiwazaki N, Kono T
    • Journal Title

      Theriogenology

      Volume: 78(3) Pages: 560-566

    • DOI

      doi:10.1016/j.theriogenology.2012.03.001

    • Peer Reviewed
  • [Journal Article] Imprinted DNA methylation reprogramming during early mouse embryogenesis at the Gpr1-Zdbf2 locus is linked to long cis-intergenic transcription2012

    • Author(s)
      Kobayashi H, Sakurai T, Sato S, Nakabayashi K, Hata K, Kono T
    • Journal Title

      FEBS Lett

      Volume: 23;586(6) Pages: 827-833

    • DOI

      doi:10.1016/j.febslet.2012.01.059

    • Peer Reviewed
  • [Journal Article] Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells2012

    • Author(s)
      Stadtfeld M, Apostolou E, Akutsu H, Fukuda A, Follett P, Natesan S, Kono T, Shioda T, Hochedlinger K
    • Journal Title

      Nature

      Volume: 13;465(7295) Pages: 175-181

    • DOI

      doi:10.1038/nature09017

    • Peer Reviewed
  • [Journal Article] Epigenetically immature oocytes lead to loss of imprinting during embryogenesis2011

    • Author(s)
      Obata Y, Hiura H, Fukuda A, Komiyama J, Hatada I, Kono T
    • Journal Title

      J Reprod Dev

      Volume: 57(3) Pages: 327-334

    • Peer Reviewed
  • [Journal Article] Longevity in mice without a father2010

    • Author(s)
      Kawahara M, Kono T
    • Journal Title

      Hum Reprod

      Volume: 25(2) Pages: 457-461

    • DOI

      doi:10.1093/humrep/dep400

    • Peer Reviewed
  • [Journal Article] Restoration of Dlk1 and Rtl1 is necessary but insufficient to rescue lethality in intergenic differentially methylated region (IG-DMR)- deficient mice2010

    • Author(s)
      Takahashi N, Kobayashi R, Kono T
    • Journal Title

      J Biol Chem

      Volume: 285(34) Pages: 26121-26125

    • DOI

      doi:10.1074/jbc.M109.075325

    • Peer Reviewed
  • [Journal Article] Identification of inappropriately reprogrammed genes by large-scale transcriptome analysis of individual cloned mouse blastocysts2010

    • Author(s)
      Fukuda A, Cao F, Morita S, Yamada K, Jincho Y, Tane S, Sotomaru Y, Kono T
    • Journal Title

      PLoS One

      Volume: 30;5(6) Pages: e11274

    • DOI

      doi:10.1371/journal.pone.0011274

    • Peer Reviewed
  • [Journal Article] Identification of the mouse paternally expressed imprinted gene Zdbf2 on chromosome 1 and its imprinted human homolog ZDBF2 on chromosome 22009

    • Author(s)
      Kobayashi H, Yamada K, Morita S, Hiura H, Fukuda A, Kagami M, Ogata T, Hata K, Sotomaru Y, Kono T
    • Journal Title

      Genomics

      Volume: 93(5) Pages: 461-47

    • DOI

      doi:10.1016/j.ygeno.2008.12.012

    • Peer Reviewed
  • [Journal Article] Deletion of Gtl2, imprinted non-coding RNA, with its differentially methylated region induces lethal parent-origin- dependent defects in mice2009

    • Author(s)
      Takahashi N, Okamoto A, Kobayashi R, Shirai M, Obata Y, Ogawa H, Sotomaru Y, Kono T
    • Journal Title

      Hum Mol Genet

      Volume: 15;18(10) Pages: 1879-1888

    • Peer Reviewed
  • [Journal Article] Defining contributions of paternally methylated imprinted genes at the Igf2-H19 and Dlk1-Gtl2 domains to mouse placentation by transcriptomic analysis2009

    • Author(s)
      Kawahara M, Morita S, Takahashi N, Kono T
    • Journal Title

      J Biol Chem

      Volume: 284(26) Pages: 17751-17765

    • URL

      doi:10.1074/jbc.M109.000299

    • Peer Reviewed
  • [Journal Article] Developmental ability of trophoblast stem cells in uniparental mouse embryos2009

    • Author(s)
      Ogawa H, Shindo N, Kumagai T, Usami Y, Shikanai M, Jonwn K, Fukuda A, Kawahara M, Sotomaru Y, Tanaka S, Arima T, Kono T
    • Journal Title

      Placenta

      Volume: 30(5) Pages: 448-456

    • DOI

      doi:10.1016/j.placenta.2009.02.006

    • Peer Reviewed
  • [Journal Article] Protocol for the production of viable bimaternal mouse embryos2008

    • Author(s)
      Kawahara M, Obata Y, Sotomaru Y, Shimozawa N, Bao S, Tsukadaira T, Fukuda A, Kono T
    • Journal Title

      Nat Protoc

      Volume: 3(2) Pages: 197-209

    • DOI

      doi:10.1038/nprot.2007.531

    • Peer Reviewed
  • [Presentation] 着床前クローン胚発生において異常発現遺伝子の染色体マップ2012

    • Author(s)
      曹峰,福田篤,渡辺大士,河野友宏
    • Organizer
      第35回日本分子生物学会
    • Place of Presentation
      福岡国際会議場
    • Year and Date
      2012-12-11
  • [Presentation] マウス配偶子における全ゲノム包括的 DNAメチローム解析2011

    • Author(s)
      小林久人,河野友宏
    • Organizer
      日本分子生物学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-16
  • [Presentation] DNAメチローム解析による生殖系列のリプログラミング評価2011

    • Author(s)
      河野友宏
    • Organizer
      第56回日本生殖医学会学術講演会・総会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-08
  • [Presentation] マウス雌核発生胚の胚盤胞期胚における内部細胞塊および栄養外胚葉における網羅的遺伝子発現解析2011

    • Author(s)
      小川英彦,後藤詩織,岸靖典,曹峰,河野友宏
    • Organizer
      第104回日本繁殖生物学会大会
    • Place of Presentation
      いわて県民情報交流センター
    • Year and Date
      2011-09-16
  • [Presentation] Methylomes and transcriptomes in mouse germ cells2011

    • Author(s)
      Tomohiro Kono
    • Organizer
      Fertility 2011
    • Place of Presentation
      Dublin, Ireland
    • Year and Date
      2011-01-07
  • [Presentation] Bisulphite Shotgun Sequencing法によるマウス生殖細胞の包括的 DNAメチル化解析2010

    • Author(s)
      小林久人,桜井隆順,福田篤,高橋望,尾畑やよい,中林一彦,秦健一郎,外丸佑介,鈴木穣,河野友宏
    • Organizer
      第33回分子生物学会(BMB2010)
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2010-12-08
  • [Presentation] 着床前マウスクローン胚におけるトランスクリプトーム解析2010

    • Author(s)
      曹 峰,福田 篤,岸 靖典,河野 友宏
    • Organizer
      第33回分子生物学会(MB2010)
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2010-12-07
  • [Presentation] 二母性マウス胚由来胎盤における網羅的遺伝子発現解析2009

    • Author(s)
      川原学,森田慎之助,高橋望,河野友宏
    • Organizer
      第102回日本繁殖生物学会
    • Place of Presentation
      近畿大学農学部
    • Year and Date
      2009-09-12
  • [Presentation] 非コードインプリント遺伝子Gtl2欠損マウスの親特異的な致死性と分子制御機構2009

    • Author(s)
      高橋望,小林亮太,岡本晶,山口瑛人,河野友宏
    • Organizer
      第102回日本繁殖生物学会
    • Place of Presentation
      近畿大学農学部
    • Year and Date
      2009-09-10
  • [Presentation] The regulation of imprinted gene2009

    • Author(s)
      Tomohiro Kono
    • Organizer
      From imprinting to the Epigenome in 25 years
    • Place of Presentation
      University of Cambridge, England
    • Year and Date
      2009-09-06
  • [Presentation] Genetic modification for bi-maternal embryo development2009

    • Author(s)
      Tomohiro Kono
    • Organizer
      35th Annual Conference of the International Embryo Transfer Society
    • Place of Presentation
      SanDiego, USA
    • Year and Date
      2009-01-05
  • [Presentation] 非コードインプリント遺伝子 Gtl2欠損マウスにおける親の特異的な致死性および遺伝子発現異常2008

    • Author(s)
      高橋望,岡本晶,小林亮太,白井求,小川英彦,尾畑やよい,河野友宏
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-11
  • [Presentation] Generation of viable bimaternal mice lacking a paternal genome2008

    • Author(s)
      Tomohiro Kono
    • Organizer
      World Congress on Reproductive Biology
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      2008-05-24
  • [Presentation] Deletion of the maternally expressed imprinted gene, Gtl2, resulted in parental-specific lethality in mice2008

    • Author(s)
      Nozomi Takahashi, Akira Okamoto, Motomu Shirai, Ryota Kobayashi, Tomohiro Kono
    • Organizer
      World Congress on Reproductive Biology
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      2008-05-24
  • [Book] 卵子発育とゲノムインプリンティング,「卵子学」2011

    • Author(s)
      河野友宏, 他
    • Total Pages
      110-121
    • Publisher
      京都大学学術出版会
  • [Book] 生殖系列細胞のプログラム, 「生命の誕生にむけて」2010

    • Author(s)
      河野友宏,他
    • Total Pages
      20-26
    • Publisher
      近大出版
  • [Remarks]

    • URL

      http://nodai-konolab.net/

  • [Patent(Industrial Property Rights)] 核移植卵、単為発生胚および単為発生非ヒト哺乳動物の作出方法2012

    • Inventor(s)
      河野友宏、川原学
    • Industrial Property Rights Holder
      学校法人東京農業大学
    • Industrial Property Number
      特許、特許第5078074号
    • Acquisition Date
      2012-09-07
  • [Patent(Industrial Property Rights)] METHOD OF CONSTRUCTING NUCLEUS-IMPLANTED EGG,PARTHENOGENETIC EMBRYO AND PARTHENOGENETIC MAMMAL2010

    • Inventor(s)
      河野友宏、尾畑やよい、川原学
    • Industrial Property Rights Holder
      学校法人東京農業大学
    • Industrial Property Number
      特許、7659443
    • Acquisition Date
      2010-02-09
    • Overseas
  • [Patent(Industrial Property Rights)] METHOD OF CONSTRUCTING NUCLEAR-TRANSPLANTED EGG,PARTHENOGENETIC EMBRYO AND PARTHENOGENETIC MAMMAL2009

    • Inventor(s)
      河野友宏、尾畑やよい
    • Industrial Property Rights Holder
      学校法人東京農業大学
    • Industrial Property Number
      特許、1661456
    • Acquisition Date
      2009-02-25
    • Overseas
  • [Patent(Industrial Property Rights)] 核移植卵、単為発生胚および単為発生哺乳動物の作出方法2009

    • Inventor(s)
      河野友宏、尾畑やよい
    • Industrial Property Rights Holder
      学校法人東京農業大学
    • Industrial Property Number
      特許、特許第4275137号
    • Acquisition Date
      2009-03-13
  • [Patent(Industrial Property Rights)] METHOD OF CONSTRUCTING NUCLEUS-IMPLANTED EGG,PARTHENOGENETIC EMBRYO AND PARTHENOGENETIC MAMMAL2008

    • Inventor(s)
      河野友宏、尾畑やよい、川原学
    • Industrial Property Rights Holder
      学校法人東京農業大学
    • Industrial Property Number
      特許権、12/213,385
    • Filing Date
      2008-06-18
    • Overseas
  • [Patent(Industrial Property Rights)] 核移植卵、単為発生胚および単為発生非ヒト哺乳動物の作出方法2007

    • Inventor(s)
      河野友宏、川原学
    • Industrial Property Rights Holder
      学校法人東京農業大学
    • Industrial Property Number
      特許権、特願2007-171707
    • Filing Date
      2007-06-29
  • [Patent(Industrial Property Rights)] METHOD OF CONSTRUCTING NUCLEAR-TRANSPLANTED EGG,PARTHENOGENETIC EMBRYO AND PARTHENOGENETIC MAMMAL2004

    • Inventor(s)
      河野友宏、尾畑やよい
    • Industrial Property Rights Holder
      学校法人東京農業大学
    • Industrial Property Number
      特許権、04771478.7
    • Filing Date
      2004-08-04
    • Overseas
  • [Patent(Industrial Property Rights)] 核移植卵、単為発生胚および単為発生哺乳動物の作出方法2004

    • Inventor(s)
      河野友宏、尾畑やよい
    • Industrial Property Rights Holder
      学校法人東京農業大学
    • Industrial Property Number
      特許権、特願2005-512613
    • Filing Date
      2004-08-04

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Published: 2014-08-29  

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