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1992 Fiscal Year Final Research Report Summary

Dissection of polypeptide translocator function of SecY

Research Project

Project/Area Number 02404087
Research Category

Grant-in-Aid for General Scientific Research (A)

Allocation TypeSingle-year Grants
Research Field 分子遺伝学・分子生理学
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

ITO Koreaki  Kyoto Univ., Professor, ウイルス研究所, 教授 (90027334)

Co-Investigator(Kenkyū-buntansha) AKIYAMA Yoshinori  Kyoto Univ., Instructor, ウイルス研究所, 助手 (10192460)
Project Period (FY) 1990 – 1992
KeywordsProtein secretion / protein translocation / SecY / SecE / Dominant mutation / Periplasm / Membrane protein
Research Abstract

SecY is an integral membrane protein and believed to be a central component of the protein translocator in Escherichia coli. We have identified dominant negative mutations of secY whose expression interfered with protein export. Such mutations proved to reside in the C-terminal third of SecY, mostly in the cytoplasmic domain 5 (C5). On of them (secY^d1), a three residue deletion in the C5-TM9 interface, was strongly dominant-negative. The dominant negative mutant protein will sequester the interacting components in an inactive complex, and hence compete with SecY^+ for the formtion of the functiona SecY complex. Linker insertion mutations that suppressed secY^d1 were localized within the C4-TM7 region is important for SecY's interaction with other components of the system.
Consistent with our model, the secY24(Ts) mutation in the C4 domain was found to impair the SecY's interaction with SecE. Also, overproduction of either SecE or "ORF12" in the secDF operon overcame the export interference. Futhermore, we were able to identify a new gene, ydr, as another dosage-dependent overcomer of secY^d1. Although overexpressed (and presumably uncomplexed) SecY was rapidly degraded in vivo, it was significantly stabilized by simultaneous overproduction of either SecE, Orf12,or Ydr. Interestingly, overproduction of Ydr in the secY24 mutant cell severely interfered with protein export and the viability. Ydr, a hydrophilic 181-residue protein with is C-terminal region potentially forming an amphiphilic alpha-helix, is loosely associated with the membrane.
Finally we addressed whether any factors are required for membrane protein integration. Our mutational analyses suggested that FtsH, a putative membrane bound ATPase with homology to a family of eukaryotic ATPases, has a role in assuring efficient anchoring of a hydrophobic stretch to the membrane as well as in the translocation process itself.

  • Research Products

    (35 results)

All Other

All Publications (35 results)

  • [Publications] Akiyama,Y.and Ito,K.: "SecY protein,a membrane embedded secretion factor of E.coli,is cleaved by the OmpT protease in vitro." Biochem.Biophys.Res.Commun.167. 711-715 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Akiyama,Y.,Inada,T.,Nakamura,Y.and Ito,K.: "SecY,a multispanning membrane protein,contains a potential leader peptidase cleavage site." J.Bacteriol.172. 2888-2893 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Amaya,Y.,Nakano,A.,Ito,K.and Mori,M.: "Isolation of a yeast gene,SRH1,that encodes a homologue of the 54K subunit of mammalian signal recognition particle." J.Biochem.107. 457-463 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Baba,T.,Jacq,A.,Brickman,E.,Beckwith,J.,Taura,T.,Ueguchi,C.,Akiyama,Y.,and Ito,K.: "Characterization of cold-sensitive secY mutants of Escherichia coli." J.Bacteriol.172. 7005-7010 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ito,K.: "Structure,function and biogenesis of SecY,an integral membrane protein involved in protein export." J.Bioenerg.Biomembr.22. 353-367 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nakamura,K.,Takamatsu,H.,Akiyama,Y.,Ito,K.,and Yamane,K.: "Complementation of the protein transport defect of the Escherichia coli secY mutant (secY24) by B.subtilis secY homologue." FEBS Lett.273. 75-78 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ueguchi,C.,and Ito,K.: "Escherichia coli sec mutants accumulate a processed immature form of maltose-binding protein (MBP),a late-phase intermediate in MBP export." J.Bacteriol.172. 5643-5649 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yamane,K.,Akiyama,Y.,Ito,K.,and Mizushima,S.: "A positively charged region is a determinant of the orientation of cytoplasmic membrane proteins in Escherichia coli." J.Biol.Chem.265. 21166-21171 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Sakaguchi,M.,Ueguchi,C.,Ito,K.,and Omura,T.: "Yeast gene which suppresses the defect in protein export of a secY mutant of E.coli." J.Biochem.109. 799-802 (1991)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Taura,T.,and Ito,K.: "Does protein secretion activity vary during the cell cycle of Escherichia coli?" J.Biochem.109. 811-815 (1991)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ito,K.and Akiyama,Y.: "In vivo analysis of integration of membrane proteins in Escherichia coli." Mol.Microbiol.5. 2243-2253 (1991)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kamitani,S.,Akiyama,Y.,and Ito,K.: "Identification and characterization of an Escherichia coli gene required for the formation of correctly folded alkaline phosphatase,a periplasmic enzyme." EMBO J.11. 57-62 (1992)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ueguchi,C.,and Ito,: "Multicopy suppression:an approach to understanding intracellular functioning of the protein export system." J.Bacteriol.174. 1454-1461 (1992)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shimoike,T.,Akiyama,Y.,Baba,T.,Taura,T.,and Ito,K.: "SecY variants that interfere with Escherichia coli protein export in the presence of normal secY." Mol.Microbiol.6. 1205-1210 (1992)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ito,K.: "SecY and integral membrane components of the Escherichia coli protein translocation system." Mol.Microbiol.6. 2423-2428 (1992)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Taura,T.,Ueguchi,C.,Shiba,K.,and Ito,K.: "Insertional disruption of the nusB gene leads to cold-sensitive growth and suppression of the secY24 mutation." Mol.Gen.Genet.234. 429-432 (1992)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Akiyama,Y.,Kamitani,S.,Kusukawa,N.,and Ito,K.: "In vitro catalysis of oxidative folding of disulfidebonded proteins by Escherichia coli dsbA (ppfA) gene product." J.Biol.Chem.267. 22440-22445 (1992)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Akiyama,Y.and Ito,K.: "Folding and assembly of bacterial alkaline phosphatase in vitro and in vivo." J.Biol.Chem.268,. (1993)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Ito,K.,Akiyama,Y.,Ueguchi,C.,Taura,T.and Baba,T.: "Structure and function of E.coli SecY protein,an integral membrane component of the protein translocation system.Protein Engineering.Protein Design in Basic Research,Medicine,and Industry (ed.M.Ikehara)" Japan Scientific Societies Press/Springer-Verlag,6 (1990)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Akiyama,Y. and Ito,K.: "SecY protein, a membrane embedded secretion factor of E.coli, is cleaved by the OmpT protease in vitro." Biochem.Biophys.Res.Commun. 167. 711-715 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Akiyama,Y., Inada,T., Nakamura,Y. and Ito,K: "SecY, a multispanning membrane protein, contains a potential leader peptidase cleavage site." J.Bacteriol. 172. 2888-2893 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ito,K: "Structure, function and biogenesis of SecY, an integral membrane protein involved in protein export." J.Bioenerg.Biomembr. 22. 353-367 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ueguchi,C. and Ito,K: "Escherichia coli sec mutants accumulate a processed immature form of maltose-binding protein (MBP), a late-phase intermediate in MBP export" 4.Bacteriol. 172. 5643-5649 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Baba,T., Jacq,A., Brickman,E., Beckwith,J., Taura,T., Ueguchi,C., Akiyama,Y., and Ito,K: "Characterization of cold-sensitive secY mutants of Escherichia coli" J.Bacteriol. 172. 7005-7010 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Taura,T., and Ito,K: "Does protein secretion activity vary during the cell cycle of Escherichia coli?" J.Biochem. 109. 811-815 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ito,K. and Akiyama,Y: "In vivo analysis of integration of proteins Escherichia coli." Mol.Microbiol. 5. 2243-2253 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ito,K., and Akiyama,Y.: "Membrane components of the protein secretion machinery." Meth.Cell Biol. 34. 189-203 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kamitani,S., Akiyama,Y., and Ito,K: "Identification and characterization of an Escherichia coli gene required for the formation of correctly folded alkaline phosphatase, a periplasmic enzyme." EMBO J. 11. 57-62 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ueguchi,C., and Ito,K: "Multicopy suppression an approach to understanding intracellular functioning of the protein export system." J.Bacteriol. 174. 1454-1461 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shimoike,T., Akiyama,Y., Baba,T., and Ito,K: "SecY variants that interfere with Escherichia coli protein export in the presence of normal secY." Mol.Microbiol. 6. 1205-1210 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ito,K: "SecY and integral membrane components of the Escherichia coli protein translocation system." Mol.Microbiol. 6. 2423-2428 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Taura,T., Ueguchi,C., Shiba,K., and Ito,K: "Insertional disruption of the nusB gene leads to cold-sensitive growth and suppression of the secY24 mutation." Mol.Gen.Genet. 234. 429-432 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Akiyama,Y., Kamitani,S., Kusukaw,N., and Ito,K: "In vitro catalysis of oxidative folding of disulfide-bonded proteins by Escherichia coli dsbA (ppfA) gene product" J.Biol.Chem. 267. 22440-22445 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Akiyama,Y. and Ito,K.(1993): "Folding and assembly of bacterial alkaline phosphatase in vitro and in vivo." J.Biol.Chem. 268. (1993)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ito,K., Akiyama,Y., Ueguchi,C., Taura,T. and Baba,T: Japan Scientific Societies Press/Springer-Verlag. Structure and function of E.coli SecY protein, an integral membrane component of the protein translocation system. Protein Engineering. Protein Design in Basic Research, Medicine and Industry(ed. M.Ikehara), 6 (1990)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1994-03-24  

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