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1996 Fiscal Year Final Research Report Summary

Molecular mechanisms of branch migration and resolution of Holliday junctions

Research Project

Project/Area Number 06404002
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field 遺伝
Research InstitutionOsaka University

Principal Investigator

SHINAGAWA Hideo  Res.Inst.Microbial Diseases, Osaka Univ.Professor, 微生物病研究所, 教授 (40029799)

Co-Investigator(Kenkyū-buntansha) IWASAKI Hiroshi  Res.Inst.Microbial Diseases, Osaka Univ.Research Associate, 微生物病研究所, 助手 (60232659)
Project Period (FY) 1994 – 1996
KeywordsDNA recombination / DNA repair / Holliday junction / Mutant / RecG protein / RuvA protein / RuvB protein / RuvC protein
Research Abstract

We studied reaction mechanisms and functions of RuvA and RuvB protein complex and RecG protein which drives branch migration of Holliday junctions and RuvC protein which endonucleolytically resolves Holliday junctions.
1.We discovered that RecG protein has a unique function to resolve the R-loops formed at the replication origin and negatively regulate the initiation of replication.
2.We studied the substrate specificity of RuvC resolvase with various synthetic Holliday junctions and found that the existence of thymine residue at or near crossover point is important but the sequence homology at the junction is not important for the cleavage.
3.We cloned and analyzed the ruvA,ruvB and ruvC genes of Pseudomonas aeruginosa and found that although the arrangement of the genes are different from that of the Escherichia coli genes, they possess the similar functions.
4.We cloned, expressed the Thermus thermophilus ruvB gene and characterized the RuvB protein.
5.We studied the morphology of ruv mutants and recG mutants and found that the abortive recombination in these mutants inhibit the chromosome nondisjunction.

  • Research Products

    (17 results)

All Other

All Publications (17 results)

  • [Publications] Shinagawa, H. Iwasaki, H.: "Processing the Holliday junction in homologous recombination." Trends Biochem. Sci.21. 107-111 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Hishida, T., Iwasaki, H., Ishioka, K. Shinagawa, H.: "Molecular analysis of the Pseudomonas aeryginosa genes, ruvA, ruvB and ruvC, involved in processing of homologous recombination intermediates." Gene. 182. 63-70 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shida, T., Iwasaki, H., Saito, a., Kyogoku, Y. Shinagawa. H.: "Analysis of substrate specificity of the RuvC Holliday junction resolvase with synthetic Holliday junctions." J. Biol. Chem.271. 26105-26109 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shida, T., Iwasaki, H., Shinagawa, H. Kyogoku, Y.: "Characterization and comparison of synthetic immobile and mobile Holliday junctions." J. Biochem.119. 653-658 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Fukuoh, A., Iwasaki, H., Ishioka, K. Shinagawa, H.: "ATP-dependent resolution of R-loops at the ColEl replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase." EMBOJ.16. 203-209 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shinagawa, H.: "SOS response as an adaptive response to DNA damage in prokaryotes. In Stress-inducible Cellular Responses." Base1 : Birkhdddnser Verlag, U. Feige, R. I. Morimoto, I. Yahara and B. Polla, eds., 221-235 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Takahagi, M., Iwasaki, H.and Shinagawa, H.: "Structural requirements of substrate DNA for binding to and cleavage by RuvC,a Holliday junction resolvase." J.Biol.Chem.269. 15132-15139 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ariyoshi, M., Vassylyev, D.G., Iwasaki, H., Fujishima, A., Shinagawa, H.and Morikawa, K.: "Preliminary crystallographic study of Escherichia coli RuvC protein : an endonuclease specific for Holliday junctions." J.Mol.Biol.241. 281-282 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ariyoshi, M., Vassylyev, D.G., Iwasaki, H., Nakamura, H., Shinagawa, H.and Morikawa, K.: "Atomic structure of the RuvC resolvase : a Holliday junction-specific endonuclease from E.coli." Cell. 78. 1063-1072 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Ishino, Y., Iwasaki, H., Kato, I.and Shinagawa, H.: "Amino acid sequencemotifs essential to 3'*5' exonuclease activity of Escherichia coli DNA Polymerase II." J.Biol.Chem.269. 14655-14660 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shinagawa, H.and Iwasaki, H.: "Molecular mechanisms of Holliday junction processing in Escherichia coli." Adv.Biophys.31. 49-65 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Saito, A., Iwasaki, H., Ariyoshi, M., Morikawa, K.and Shinagawa, H.: "Identification of four acidic amino acids that constitute the catalytic center of the RuvC Holliday junction resolvase" Proc.Natl.Acad.Sci.USA,92. 7470-7474 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shinagawa, H.and Iwasaki, H.: "Processing the Holiday junction in homologous recombination." Trends Biochem.Sci.21. 107-111 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shida, T., Iwasaki, H., Shinagawa, H.and Kyogoku, Y.: "Characterization and comparison of synthetic immobile and mobile Holliday junctions." J.Biochem.119. 653-658 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shida, T., Iwasaki, H., Saito, A., Kyogoku, Y.and Shinagawa, H.: "Analysis of substrate specificity of the RuvC Holliday junction resolvase with synthetic Holliday junctions." J.Biol.Chem.271. 26105-26109 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Hishida, T., Iwasaki, H., Ishioka, K.and Shinagawa, H.: "Molecular analysis of the Pseudomonas aeruginosa genes, ruvA,ruvB and ruvC,involved in processing of homologous recombination intermediates." Gene. 182. 63-70 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Fukuoh, A., Iwasaki, H., Ishioka, K.and Shinagawa, H.: "ATP-dependentresolution of R-loops at the ColE1 replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase." EMBO J.16. 203-209 (1997)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-03-09  

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