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1996 Fiscal Year Final Research Report Summary

Isolation and characterization of new markers for human brain tumors using molecular biological techniques

Research Project

Project/Area Number 06557078
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section試験
Research Field Cerebral neurosurgery
Research InstitutionNiigata University

Principal Investigator

USUI Hiroshi  Brain Res.Inst., Niigata Univ., Research Associate, 脳研究所, 助手 (20192510)

Co-Investigator(Kenkyū-buntansha) WASHIYAMA Kazuo  Brain Res.Inst., Niigata Univ., Associate Professor, 脳研究所, 助教授 (00183715)
KUMANISHI Toshiro  Brain Res.Inst., Niigata Univ., Professor, 脳研究所, 教授 (40018601)
Project Period (FY) 1994 – 1996
Keywordsbrain tumor / tumor marker / gene expression / cDNA cloning / brain development / onco-fetal antigen / glioma / genemutation
Research Abstract

In this research project, we first established improved molecular biological procedures for efficient isolation of cDNA clones of differentially expressed mRNAs from small materials : (1) modified differential screening procedure, (2) directional tag PCR subtraction, an efficient subtractive cDNA cloning procedure, and (3) cDNA library DNA-Southern blot procedure which can replace Northern blot analysis.
Using these procedures, we successfully isolated 22 distinct rat cDNA clones whose corresponding mRNAs were preferentially expressed in the fetal brain during the brain development. We then isolated their human homologues and analyzed the mRNA expressions in various human tissues. We found that the expression pattern of the human neuronatin was notable. The neuronatin mRNA was selectively expressed in fetal human brain among normal human tissues and in human pituitary adenomas among various human brain tumors, suggesting the utilization as a new marker for the pituitary adenomas. We also analyzed the mRNA patterns of human glioma cell lines exhibiting different biological characters using the procedures described above. We identified 9 cDNA clones whose corresponding mRNAs were expressed more abundantly in the cells which showed hetero-transplantability and higher growth rate than the control cells. These cDNA clones included novel clones and those involved in the protein synthesis, signal transduction, and nucleotide metabolism. These findings showed that our improved procedures are useful to analyze molecular basis of tumor cells and to identify new tumor markers.
In addition, we analyzed gene mutations in human brain tumors to understand the molecular backgrounds of different mRNA expressions, and found frequent gene mutations of tumor suppressor genes, such as p53 and p16, in human brain tumors.

  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Usui, H.: "Isolation of cDNA clones of the rat mRNAs expressed preferentially in the prenatal stages of brain development" Dev. Brain Res.97. 185-193 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tsumanuma, I.: "Infrequent mutation of Wafl/p21 gene, a CDK inhibitor gene, in brain tumors" Neurol. Med. Chir.37. 150-157 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Washiyama, K.: "Neurotrophin and neurotrophin receptor proteins in medulloblastomas and other primitive neuroectodermal tumors of the pediatric central nervous system" Am. J. Pathol.148. 929-940 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Koga, H.: "Analysis of p53 gene mutations in human glioma cell lines" Brain Tumor Pathol.13. 1-10 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kumanishi, T.: "Primary malignant lymphoma of the brain : Demonstration of frequent p16 and p15 gene deletions" Jpn. J. Cancer Res.87. 691-695 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Zhang, S.: "A comparative study of glioma cell lines for p16, p15, p53 and p21 gene alteration" Jpn. J. Cancer Res.87. 900-907 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Feng, X.: "Intracranial germ cell tumors : Detection of p53 gene mutations by single-strand conformation polymorphism (SSCP) analysis" Jpn. J. Cancer Res.86. 555-561 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Tsumanuma, I: "The analysis of p53 tumor suppresspor gene in pineal parenchymal tumors" Brain Tumor Pathol.12. 39-43 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 古閑比佐志: "脳腫瘍に於けるp53癌抑制遺伝子の変異" 脳と神経. 47. 845-855 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Usui, H.: "Isolation of clones of rat striatum-specific mRNAs by directional tag PCR subtraction" J. Neurosci.14. 4915-4926 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Koga, H.: "Primary malignant lymphoma of the brain : demonstration of the p53 gene mutations by PCR-SSCP analysis and immunohistochemistry" Brain Tumor Pathol.11. 151-155 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Koga, H.: "Analysis of p53 gene mutations in low and high grade astrocytomas by PCR-SSCP and immunohistochemistry" Acta Neuropathol.87. 225-232 (1994)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kilduff, T. S.: "Molecular Regulation of Conscious State" CRC Press (in press), (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 熊西 敏郎: "現代病理学体系" 中山書店, 17 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 熊西 敏郎: "タンパク質化学" 廣川書店, 5 (1995)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Usui, H.: "Isolation of cDNA clones of the rat mRNAs expressed preferentially in the prenatal stages of brain development" Dev.Brain Res.97. 185-193 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tsumanuma, I.: "Infrequent mutation of Waf1/p21 gene, a CDK inhibitor gene, in brain tumors" Neurol.Med.Chir.37. 150-157 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kilduff, T.S.: "Isolation and identification of specific transcripts by subtractive hybridization" in : Molecular Regulation of Conscious State, CRC Press. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Washiyama, K.: "Neurotrophin and neurotrophin receptor proteins in medulloblastomas and other primitive neuroectodermal tumors of the pediatric central nervous system" Am.J.Pathol.148. 929-940 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Koga, H.: "Analysis of p53 gene mutations in human glioma cell lines" Brain Tumor Pathol.13. 1-10 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kumanishi, T.: "Primary malignant lymphoma of the brain : Demonstration of frequent p16 and p15 gene deletions" Jpn.J.Cancer Res.87. 691-695 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Zhang, S.: "A comparative study of glioma cell lines for p16, p15, p53 and p21 gene alteration" Jpn.J.Cancer Res.87. 900-907 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Feng, X.: "Intracranial germ cell tumors : Detection of p53 gene mutations by single-strand conformation polymorphism (SSCP) analysis" Jpn.J.Cancer Res.86. 555-561 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kumanishi, T.: "Tumor suppressor genes and human brain tumors (Japanese)" in : Current Encyclopedia of Patholgy. : Nakayama Publishing Come.257-273 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Tsumanuma, I.: "The analysis of p53 tumor suppresspor gene in pineal parenchymal tumors" Brain Tumor Pathol.12. 39-43 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Koga, H.: "p53 tumor suppressor gene mutations in human brain tumors (Japanese)" Brain and Nerve. 47. 845-855 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kumanishi, T.: "Glial fibrillary acidic protein ; GFAP (Japanese)" in : Protein Chemistry-Molecular Structures and Functions-vol.14 : Hirokawa Publishing Comp.3-8 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Usui, H.: "Isolation of clones of rat striatum-specific mRNAs by directional tag PCR subtraction." J.Neurosci.14. 4915-4926 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Koga, H.: "Primary malignant lymphoma of the brain : demonstration of the p53 gene mutations by PCR-SSCP analysis and immunohistochemistry" Brain Tumor Pathol.11. 151-155 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Koga, H.: "Analysis of p53 gene mutations in low and high grade astrocytomas by PCR-SSCP and immunohistochemistry" Acta Neuropathol.87. 225-232 (1994)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-03-09  

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