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1998 Fiscal Year Final Research Report Summary

Crystallographic and Genetic Study of Cytochrome bc1 Complex

Research Project

Project/Area Number 08044203
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research Field Structural biochemistry
Research InstitutionOsaka University

Principal Investigator

FUKUYAMA Keiichi  Graduate School of Science, Professor, 大学院・理学研究科, 教授 (80032283)

Co-Investigator(Kenkyū-buntansha) OH-OKA Hirozo  Graduate School of Science, Research Associate, 大学院・理学研究科, 助手 (30201966)
TAKAHASHI Yasuhiro  Graduate School of Science, Lecturer, 大学院・理学研究科, 講師 (10154874)
SAEKI Kazuhiko  Graduate School of Science, Lecturer, 大学院・理学研究科, 講師 (40201511)
FEVZI Daldal  Univ. of Pennsylvania Dept. of Biology, 教授
DALDAL Fevzi  Univ.of Pennsylvania Dept.of Biology, Professor
Project Period (FY) 1996 – 1998
KeywordsCytochrome / Histidine-tag / Rhodobacter capsulatus / Membrane Protein
Research Abstract

For efficient supply of crystallization materials, two fast and highly efficient methods were developed to facilitate large scale purification of the cytochrome (cyt) bc_1 complex from Rhodobacer capsulatus. The methods rely on the high affinity of hexa-histidine tag for Ni^<2+>2-nitrilotriacetic acid (NTA) agarose. Genes for two type of (His) _6-tagged bc_1 complex were engineered : one was fused at the C-terminus of cyt c^1 (ct-tagged), and another was at the C-terminus of Rieske subunit (Rieske-tagged). Each engineered gene was transferred into a bc^1complex-null mutant MT-RBCl. The resultant strains and the bc^1 complexes they produce were analyzed in detail.
Both Rieske- and c1 ^1-tagged bc^1 complex supported photosynthetic growth of R.capsulatus. The enzymes in chromatophore membrane showed the steady-state activity of about 20% and 35%, and the flash-induced single turnover kinetics of about 70% and 90% of those of wild-type complex, respectively. The tagged bcl^1 complex can be readily purified with high yield by Ni^<2+>-NTA-agarose chromatography. Their crystallization are under study.

  • Research Products

    (16 results)

All Other

All Publications (16 results)

  • [Publications] K.Fukuyama: "Binding of Iodide to Atrhromyces ramosus Peroxidase Investigated with X-Ray Crystallo-graphic Analysis, ^1H and ^<127>INMR Spectroscopy, and Steady-state Kinetics" J.Biol.Chem.272(9). 5752-5756 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Kumagai: "Membrane Localization, Topology and Mutual Stabilization of the rnfABC Gene Products in Rhodobacter capsulatus and Implications for A New Family of Energy-Coupling NADH-Oxidoreductases" Biochemistry.36(18). 5509-5521 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Oh-oka: "Viscosity Dependence of the Electron Transfer Rate from Bound Cytochrome c to P840 in the Photosynthetic Reaction Center of the Green Sulfur Bacterium Chlorobium tepidum" Biochemistry. 36(30). 9267-9272 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Itakura: "Binding Mode of Benzhydroxamic Acid to Atrhromyces ramosus Peroxidase Shown by X-Ray Crystallographic Analysis of the Complex at 1.6 Å Resolution" FEBS Letters. 412. 107-110 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Oda: "Tertiary and Quaternary Structure of 0.19 α-Amilase Inhibitor from Wheat Kernel Determined by X-Ray Analysis of the Complex at 2.06 Å Resolution" Biochemistry. 36 (44). 13503-1351 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Tachiki: "Domain Organization and Functional Analysis of Thermus thermophilus MutS Protein" Nucleic Acid Research. 26 (18). 4153-4159 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Omata: "Crysta-llization and Preliminary X-Ray Diffraction Studies on the Water Soluble Form of Rat Heme Oxygenase-1 in Complex with Hme" Acta Cryst.D54. 1017-1019 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A.Shibata: "Crystallization and Preliminary X-Ray Diffraction Studies of a DNA Excision Enzyme, UvrB, from Thermus thermophilus HB8" Acta Cryst.D55. 704-705 (199)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Fukuyama, K.Sato, H.Itakura, S.Takahashi & T.Hosoya: "Binding of Iodide to Atrhromyces ramosus Peroxidase Investigated with X-Ray Crystallo-graphic Analysis, ^1H and ^<127>I NMR Spectroscopy, and Steady-state Kinetics" J.Biol.Chem.272(9). 5752-5756 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Kumagai, T.Fujiwara, H.Matsubara and K.Saeki: "Membrane Localization, Topology and Mutual Stabilization of the rnfABC Gene Products in Rhodobacter capsulatus and Implications for A New Family of Energy-Coupling NADH-Oxidoreductases" Biochemistry. 36. 5509-5521 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Oh-oka, M.Iwaki & S.Itoh: "Viscosity Dependence of the Electron Transfer Rate from Bound Cytochrome c to P840 in the Photosynthetic Reaction Center of the Green Sulfur Bacterium Chlorobium tepidum" Biochemistry. 36(30). 9267-9272 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Itakura, Y.Oda & K.Fukuyama: "Binding Mode of Benzhydroxamic Acid to Atrhromyces ramosus Peroxidase Shown by X-Ray Crystallographic Analysis of the Complex at 1.6 * Resolution" FEBS Letters. 412. 107-110 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Oda, T.Matsunaga, K.Fukuyama, T.Miyazaki, T.Morimoto: "Tertiary and Quaternary Structure of 0.19 alpha-Amilase Inhibitor from Wheat Kernel Determined by X-Ray Analysis of the Complex at 2.06 * Resolution" Biochemistry. 36 (44). 13503-13511 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Tachiki, R.Kato, R.Masui, K.Hasegawa, H.Itakura, K.Fukuyama & S.Kuramitsu: "Domain Organization and Functional Analysis of Thermus thermophilus MutS Protein" Nucleic Acid Research. 26 (18). 4153-4159 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Omata, S.Asada, H.Sakamoto, K.Fukuyama & M.Noguchi: "Crysta-llization and Preliminary X-Ray Diffraction Studies on the Water Soluble Form of Rat Heme Oxygenase-1 in Complex with Hme" Acta Cryst. D54. 1017-1019 (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A.Shibata, N.Nakagawa, M.Sugihara, R.Masui, R.Kato, S.Kuramitsu & K.Fukuyama: "Crystallization and Preliminary X-Ray Diffraction Studies of a DNA Excision Enzyme, UvrB,from Thermus thermophilus HB8" Acta Cryst.D55. 704-705 (1999)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-12-08  

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