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1997 Fiscal Year Final Research Report Summary

Molecular Analysis of the Genes Involved in Cardiac Defects

Research Project

Project/Area Number 08044320
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research Field Pediatrics
Research InstitutionKeio University

Principal Investigator

SHIMIZU Nobuyoshi  Keio University, School of Medicine, Department of Molecular Biology, Professor, 医学部, 教授 (50162706)

Co-Investigator(Kenkyū-buntansha) ANTONARAKIS スティタアノス  ジュネーブ大, 医学部, 教授
ASAKAWA Shuichi  Keio University School of Medicine, Department of Molecular Biology, Assistant, 医学部, 助手 (30231872)
KAWASAKI Kazuhiko  Keio University School of Medicine, Department of Molecular Biology, Assistant, 医学部, 助手 (90245465)
KUDOH Jun  Kieo University School of Medicine, Department of Molecular Biology, Assistant, 医学部, 助手 (80178003)
MINOSHIMA Shinsei  Keio University School of Medicine, Department of Molecular Biology, Assistant P, 医学部, 講師 (90181966)
ANTONARAKIS Stylianos  Univ.of Geneva Medical School, Division of Medical Genetics, Professor
Project Period (FY) 1996 – 1997
Keywordscardiac defects / exon trapping / genome sequencing / cDNA screening / transcription factor / morphogenesis / autoimmune disease / immune tolerance
Research Abstract

To isolate novel genes involved in the morphogenesis of heart, we performed exon trapping and genomic sequencing of the DNA contigs of human chromosomes 21 and 22. We also employed cDNA screening of heart cDNA library. We have isolated several novel genes from chromosome 21 including SIM (single-minded), MNB (minibrain), KNP (keio novel protein)1, KNP3, KNP4 and so on. In collaboration with Professor Antonarakis, we found two SIM genes, SIM1 and SIM2, and determined their genomic structures and tissue expresseion patterns. The SIM genes are thought to be functioning as trascription factors during the brain development. We found a cDNA clone which is expressed only in the heart of embryos but its entire structure is not yet unveiled. In collaboration with Professor McDermid, we detected a new gene which is a human homolog of mouse Bid2 gene which is believed to regulate certain cell types during the morphogenesis of heart. Thus, we have made a good progress for the past two years. Moreover, we were able to isolate another new gene AIRE which is responsible for the pathogenesis of an autoimmune disease APECED.The AIRE gene produces a pathogenesis of an autoimmune disease APECED.The AIRE gene produces a transcription factor which seems to play a role in regulating the maturation process of immune response. this finding was made in collaboration with Professors Antonarakis and Krohn. We had a mini-symposium on the autoimune disease by inviting these two professors and their research fellows to exchange ideas together with 70 audiences. During their stay, we had fruitful discussion and determined future directions of our collaboration.

  • Research Products

    (42 results)

All Other

All Publications (42 results)

  • [Publications] Osoegawa,K.: "An Integrated Map with Cosmid/PAC Contigs of a 4-Mb Down Syndrome Critical Region" Genomics. 32(3). 375-387 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Yamaki,A.: "The Mammalian single-minded(SIM)Gene;Mouse cDNA Structure and Diencephalic Expression Indicate a Candidate Gene for Down Syndrome" Genomics. 35(1). 136-143 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Shidoh,N.: "Cloning of a Human Homolog of the Drosophila Minibrain/Rat Dyrk Gene from “the Down Syndrome Critical Region"of Chromosome21" Biochem.Biophys.Res.Commun.225(1). 92-99 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nagamine,K.: "Isolation of cDNA for a Novel Human Protein KNP-I that is Homologous to the E.coli SCRP-27A Protein from the Autoimmune Polyglandular Disease Type I(APECED)Region of Chromosome 21q22.3" Biochem.Biophys.Res.Commun.225(2). 608-616 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Muratake,T.: "Structural Organization and Chromosomal Assignment of the Human 14-3-3 η Chain Gene(YWHAH)" Genomics. 36(1). 63-69 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Wang,Y.: "Chromosomal Mapping of a Family of Human Glutamine Synthetase Genes:Functional Gene(GLUL)on 1q25,Pseudogene(GLULP)on 9p13 and Three Related Genes(GLULL1,GLULL2,GLULL3)on 5q33,11p15 and 11p24" Genomics. 37(2). 195-199 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kawasaki,K.: "One Megabase Sequence Analysis of the Human Immunoglobulin λ Gene Locus" Genome Res.7(3). 250-261 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Imamura,Y.: "Human Retina-specific Amine Oxidase(RAO):cDNA Cloning,Tissue Expression and Chromosomal Mapping" Genomics. 40(2). 277-283 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kudoh,J.: "Localization of 16 Exons to a 450-kb Region Involved in the Autoimmune Polyglandular Disease Type I(APECED)on Human Chromosome 21q22.3" DNA Res.4(1). 45-52 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kubota,R.: "A Nobel Myosin-like Protein(Miocilin)Expressed in Connecting Cilium of Photoreceptor.Molecular Cloning,Tissue Expression and Chromosomal Mapping" Genomics. 41(3). 360-369 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nakayama,T.: "Mapping of the Human HPC-1/Syntaxin 1A Gene to Chromosome 7 Band q11.2" Genomics. 42(1). 173-176 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Asakawa,S.: "Human BAC Library:Construction and Rapid Screening" Gene. 191(1). 69-79 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nagamine,K.: "Genomic Organization and Complete Nucleotide Sequence of the TMEMI Gene on Human Chromosome 21q22.3" Biochem.Biophys.Res.Commun.235(1). 185-190 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Chrast,R.: "Cloning of Two Human Homologs of the Drosophila single-minded Gene SIMI on Chromosome 6q and SIM2 on 21q Within the Down Syndrome Chromosomal Region" Genome Res.7(6). 615-624 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nagamine,K.: "Genomic Organization and Nucletide Sequence of the Human PWP2 Gene on Chromosome 21" Genomics. 42(3). 528-531 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nagasawa,A: "Cloning of the cDNA for a New Member of the Immunoglobulin Superfamily(ISLR)Containing Leucine-Rich Repeat(LRR)" Genomics.44(3). 273-279 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Nagamine,K.: "Positional Cloning of APECED Gene" Nature Genet.17(4). 393-398 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Kubota,R.: "Genomic Organization of the Human Myocilin Gene(MYOC)Responsible for Primary Open Angle Glaucoma" Biochem.Biophys.Res.Commun.242(2). 396-400 (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Antonarakis,S.E.: "Report of the Committee on the Genetic Constitution of Chromosome21 In“Human Gene Mapping 1995"(eds)Cuticchia,A.J.et al." The Johns Hopkins Univ.Press, 40 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Minoshima,S.: "A Network-Transparent Database System for Mutations in the Human Disease Genes,In Proceedings Genome Informatics Workshop 1996" Universal Academy Press,Inc., 2 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Minoshima,S.: "Proceedings Genome Informatics Workshop 1997" Universal Academy Press,Inc.,Tokyo, 2 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Osoegawa, K., Susukida, R., Okano, S., Kudoh, J., Minoshima, S., Shimizu, N., de Jong, P.J., Groet, J., Ives, J., Lehrach, H., Nizetic, D.and Soeda, E.: "An Integrated Map with Cosmid/PAC Contigs of a 4-Mb Down Syndrome Critical Region" Genomics. 32 (3). 375-387 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Yamaki, A., Noda, S., Kudoh, J., Shindoh, N., Maeda, H., Minoshima, S., Kawasaki, K., Shimizu, Y.and Shimizu, N.: "The Mammalian single-minded (SIM) Gene ; Mouse cDNA Structure and Diencephalic Expression Indicate a Candidate Gene for Down Syndrome" Genemics. 35 (1). 136-143 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Shindoh, N., Kudoh, J., Maeda, H., Yamaki, A., Minoshima, S., Shimizu, Y.and Shimizu, N.: "Cloning of a Human Homolog of the Drosophila minibrain/rat Dyrk Gene from "the Down Syndrome Critical Region" of Chromosome 21" Biochem.Biophys.Res.Commun.225 (1). 92-99 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagamine, K., Kudoh, J., Minoshima, S., Kawasaki, K., Asakawa, S., Ito, F.and Shimizu, N.: "Isolation of cDNA for a Novel Human Protein KNP-I That is Homologous to the E.coli SCRP-27A Protein from the Autoimmune Polyglandular disease Type I (APECED) Region of Chromosome 21q22.3" Biochem.Giophys.Res.Commun.225 (2). 608-616 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Muratake, T., Hayashi, S., Ichikawa, t., Kumanishi, T., Ichikawa, Y., Kuwano, R., Isobe, T., Wang, Y., Minoshima, S., Shimizu, N.and Takahashi, Y.: "Structural Organization and Chromosomal Assignment of the Human 14-3-3 eta Chain Gene (YWHAH)" Genomics. 36 (1). 63-69 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Wang, Y., Kudoh, J., Kubota, R., Asakawa, S., Minoshima, S.and Shimizu, N.: "Chromosomal Mapping of a Family of Human Glutamine Synthetase Genes : Functional Gene (GLUL) on 1q25, Pseudogene (GLULP) on 9p13 and Three Related Genes (GLULL1, GLULL2, GLULL3) on 5q33,11p15 and 11p24" Genomics. 37 (2). 195-199 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kawasaki, K., Minoshima, S., Mine, E., Shibuya, K., Shintani, A., Schmeits, J.L., Wang, J.and Shimizu, N.: "One Megabase Sequence Analysis of the Human Immunoglobulin lambda Gene Locus" Genome Res.7 (3). 250-261 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Imamura, Y., Kubota, R., Wang, Y., Asakawa, S., Kudoh, J., Mashima, Y., Oguchi, Y.and Shimizu, N.: "Human Retina-specific Amine Oxidase (RAO) : cDNA Cloning, Tissue Expression and Chromosomal Mapping" Genomics. 40 (2). 277-283 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kudoh, J., Nagamine K., Asakawa, S., Abe, I., Kawasaki, K., Maeda, H., Tsujimoto, S., Minoshima, S., Ito, F.and Shimizu, N.: "Localization of 16 Exons to a 450-kb Region Involved in the Autoimmune Polyglandular Disease Type I (APECED) on Human Chromosome 21q22.3" DNA Res.4 (1). 45-52 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kubota, R., Noda, S., Wang, Y., Minoshima, S., Asakawa, S., Kudoh, J., Mashima, Y., Oguchi, Y.and Shimizu N.: "A Noble Myosin-like Protein (Miocilin) Expressed in Connecting Cilium of Photoreceptor : Molecular Cloning, Tissue Expression and Chromosomal Mapping" Genomics. 41 (3). 360-369 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nakayama, T., Fujiwara, T., Miyasawa, A., Asakawa, S., Shimizu, N., Shimizu, Y., Mikoshiba, K.and Akagawa, K.: "Mapping of the Human HPC-1/Syntaxin 1A Gene to Chromosome 7 Band q11.2" Genomics. 42 (1). 173-176 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Asakawa, S., Abe, I., Kudoh, Y., Kishi, N., Wang, Y., Kubota, R., Kudoh, J., Kawasaki, K., Minoshima, S.and Shimizu, N: "Human BAC Library : Construction and Rapid Screening" Gene. 191 (1). 69-79 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagamine, K., Kudoh, J., Kawasaki, K., Minoshima, S., Asakawa, S., Ito, F.and Shimizu, N: "Genomic Organization and Complete Nucleotide Sequence of the TMEM1 Gene on Human Chromosome 21q22.3 Chrast" Biochem.Biophys.Res.Commun.235 (1). 185-190 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] R.Scott, H.S., Chen, H., Kudoh, J., Rossier, C., Minoshima, S., Wang, Y., Shimizu, N.and Antonarakis, S.E.: "Cloning of Two Human Homologs of the Drosophila single-minded Gene SIM1 on Chromosome 6q and SIM2 on 21q Within the Down Syndrome Chromosomal Region" Genome Res.7 (6). 615-624 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagamine, K., Kudoh, J., Minoshima, S., Kawasaki, K., Asakawa, S., Ito, F.and Shimizu, N: "Genomic Organization and Nucleotide Sequence of the Human PWP2 Gene on Chromosome 21" Genomics. 42 (3). 528-531 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagasawa, A., Kubota, R., Imamura, Y., Nagamine K., Wang, Y., Asakawa, S., Kudoh, J., Minoshima, S., Mashima, Y., Oguchi, Y.and Shimizu, N.: "Cloning of the cDNA for a New Member of the Immunoglobulin Superfamily (ISLR) Containing Leucine-Rich Repeat (LRR)" Genomics. 44 (3). 273-279 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Nagamine, K., Peterson P., Scott, H.S., Kudoh, J., Minoshima, S., Heino, M., Krohn, K.J.E., Lalioti, M.D., Mullis, P.E., Antonarakis, S.E., Kawasaki, K., Asakawa, S., Ito, F.and Shimizu, N: "Positional Cloning of a Novel Zinc Finger Protein, AIR,Mutated in Autoimmune Polyglandular Disease Tyoe I (APECED)" Nature Genet.17 (4). 393-398 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Kubora, R., Kudoh, J., Mashima, Y., Asakawa, S., Minoshima, S., Hejtmancik, J.F., Oguchi, Y.and Shimizu, N.: "Genomic Organization of the Human Myocilin Gene (MYOC) Responsible for Primary Open Angle Glaucoma" Biochem.Biophys.Res.Commun.

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Antonarakis, S.E., Patterson, D., Van Broeckhoven, C., Shimizu, N., Gardiner, K., Delabar, J., Korenberg, J.and Reeves, R.: Report of the Committee on the Genetic Constitution of Chromosome 21, In "Human Gene Mapping 1995". (eds) Cuticchia, A.J., Chipperfield, M.A., & Foster, P.A.The Johns Hopkins Univ.Press, Baltimore, 1060-1099 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Minoshima, S., Mitsuyama, S., and Shimizu, N.: Mutation View : A Network-transparent Database System for Mutations in the Human Disease Genes, In Genes, In Proceedings Genome Informatics Workshop 1996. Universal Academy Press, Inc., Tokyo, 240-241 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Monoshima, S., Mitsuyama, S., Kawamura, T.and Shimizu, N.: Mutation View : A Distributed Database for Human Disease Gene Mutations, In Proceedings Genome Informatics Workshop 1997. Universal Academy Press, Inc., Tokyo, 244-245 (1997)

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-03-16  

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