• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to project page

1997 Fiscal Year Final Research Report Summary

Studies of Isoprenoid Biosynthesis in Escherichia coli-Further clarification of metabolic pathway and it's regulation mechanism

Research Project

Project/Area Number 08458169
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioorganic chemistry
Research InstitutionTohoku Univ.

Principal Investigator

NISHINO Tokuzo  Tohoku Univ., Graduate School of Engineering, Professor, 大学院・工学研究科, 教授 (90005827)

Project Period (FY) 1996 – 1997
KeywordsPrenyltransferase / farnesyl diphosphate / Escherichia coli / mutagenesis / geranylgeranyl diphosphate
Research Abstract

1.We detected two novel prenyltransferase activities in a farnesyl transferase null mutant of Escherichia coli. Although the amounts of these enzymes are slight, they are thought to substitute for the detected enzyme. They can be purified by adding a detergent into buffer solution, like membrane proteins. one of them was characterized as octaprenyl diphosphate synthase, and the other was shown to synthesize farnesyl diphosphate and longer prenyl diphosphates
2.We tried to elucidate the mechanism by which prenyltransferases decided chain length of their products, aiming at production of prenyl diphosphates in Escherichia coli. Using random mutagenesis technique, we succeeded to change chain length of the products.of prenyltransferases derived from a thermophilic eubacteria and a high-degree thermophilic archaea, and revealed that an amino acid residue which locates on the fifth position before the first of two aspartate-rich motifs, which are highly conserved between prenyltransferases, is important for the mechanism of product detemination. They were the first reports on the artificial control of the product's chain length of prenyltransferases. Besides, we compared surrounding regions of the important amino acid residues of various prenyltransferases and mutagenized them according to the result of comparison. Therefore we found that the mechanisms of product determination of prenyltransferases can be differentiated phylogenctically.

  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] S.-i.Ohnuma et al.: "Identification and Chardcterization of Geranylgeraniol Kinase and Geranylgeranyl Phosphate Kinase from Archaebacterium Sulfolobus acidocaldarius" J.Biochem.119. 541-547 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.Fujisaki et al.: "Cloning of a Gene from Escherichia coli that Confers Pesistance to Fosmidomycin as a Consequence of Amplification" Gene. 175. 83-87 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.-i.Ohnuma et al.: "Conversion from Farnesyl Diphosphate Synthase to Geranylgoranyl Diphosphate Synthase by Random Chemical Mutagenesis" J.Biol.chem.271. 10087-10095 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Okada et al.: "Polyprenyl Diphosphate Synthase Essentially Defines the Length of the Side Chain of Clbiguinone" Biochim.Biophys.Acta. 1302. 217-223 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] T.Koyama et al.: "Identification of Significant Residues in the Substrate Binding Site of Bacillus stearothermophilus Farnesyl Diphosphate Synthase" Biochomistry. 35. 9533-9538 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.-i.Ohnuma: "Conversion of Product Specificity of Archaebacterial Geraylgerany-diphosphate Synthase" J.Biol.chem.271. 18831-18837 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.-i.Ohnuma et al.: "A Role of the Amino Acid ResidueLocated on the Fifth Position before the First Aspartat-rich Motif of Farnesyl Diphosphorte Synthouse on Determination of the Final Product" J.Biol.chem.271. 30748-30754 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.-i.Ohnuma et al.: "Effects of Random Mutabenesis ina Putative Substrate-Binding Domain of Geranylgeravnyl Diphosphate Synthase upon Intermediate Formation and Substrate Specificity" J.Biochem.121. 696-704 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.-i.Ohnuma et al.: "Conversion from Archeal Geranylgeranyl Diphosphate Synthase to Farnesyl Diphosphate Synthase" J.Biol.chem.272. 5192-5198 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Nagaki et al.: "An Artificial Substrate for the Thermostable Farnesyl Diphosphate Synthase from Bacillus stearathernophilus" Chem.Lett.497-498 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 西野 徳三: "エーテル脂質生合成の初期段階" 日本油化学会誌. 46. 25-34 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] K.Kubo et al.: "Cys2/His2 Zinc-finger Protein family of Petunia:Evolction and General Meohanism of Target-sequence Pcecognition" Nucleic Acid Res.(in pross). (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.-i.Ohnuma et al.: "Recognition of Allylic Sobstrates in Suldlobrs acidocaldarius Geranylgeranyl Diphosphote Synthase-Analysis UsingMutated Enzymes and Astificial Allylic Substrates" J.Biochem.(in pross). (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Hemmi et al.: "Iolentification of lynes that Affect the Lycopene Formation in Esoherichia coli Transformed with Carotenoid Biosynthetic Genes.-Candidates for Eorly Steps of clsoprenoid Biosynthesis-" J.Biochem.(in pross). (1998)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] S.-i.Ohnuma, M.Watanabe, and T.Nishino: "Identification and Characterization of Geranylgeraniol Kinase and Geranylgeranyl Phosphate Kinase from the Archaebacterium Sulfolobus acidocaldarius." J.Biochem.119. 541-547 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S.Fujisaki, S.-i.Ohnuma, T.Horiuchi, I.Takahashi, S.Tsukui, Y.Nishiyama, T.Nishino, M.Kitabatake, and H.Inokuchi: "Cloning of a Gene from Escherichia coli that Confers Resistance to Fosmidomycin as a Consequence of Amplification." Gene. 175. 83-87 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S.i.Ohnuma, T.Nakazawa, H.Hemmi, A.-M.Hallberg, T.Koyama, K.Ogura, and T.Nishino: "Conversion from Farnesyl Diphosphate Synthase to Geranylgeranyl Diphosphate Synthase by Randam Chemical Mutagenesis" J.Bio.Chem.271. 10087-10095 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Okada, K.Suzuki, Y.Kamiya, X.Zhu, S.Fujisaki, Y.Nishimura, T.Nishino, T.Nakagawa, M.Kawamukai, and H.Matsuda: "Polyprenyl Diphosphate Synthase Essentially Defines the Length of the Side Chain of Ubiquinone." Biochim.Biophys.Acta.1302. 217-223 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T.Koyama, M.Tajima, H.Sano, T.Doi, A.Koike-Takeshita, S.Obata, T.Nishino, and K.Ogura: "Identification of Significant Residues in the Substrate Binding Site of Bacillus stearothermophilus Farnesyl Diphosphate Synthase." Biochemistry. 35. 9533-9538 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S.-i. Ohnuma, k.Hirooka, H.Hemmi, C.Ishida, C.Ohto, and T.Nishino: "Conversion of Product Specificity of Archaebacterial Geranylgeranyl-diphosphate Synthase" J.Biol.Chem.271. 18831-18837 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S.-i.Ohnuma, K.Narita, T.Nakazawa, C.Ishida, Y.Takeuchi, C.Ohto, and T.Nishino: "A Role of the Amino Acid Residue Located on the Fifth Position before the First Aspartate-rich Motif of Farnesyl Diphosphate Synthase on Determination of the Final Product." J.Biol.Chem.271. 30748-30754 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S.-i.Ohnuma, H.Hemmi, C.Ohto, H.Nakane, and T.Nishino: "Effects of Random Mutagenesis in a Putative Substrate-Binding Domain of Geranylgeranyl Diphosphate Synthase upon Intermediate Formation and Substrate Specificity" J.Biochem.121. 696-704 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S.-i.Ohnuma, K.Hirooka, C.Ohto, and T.Nishino: "Conversion from Archeal Geranylgeranyl Diphosphate Synthase to Farnesyl Diphosphate Synthase" J.Biol.Chem.272. 5192-5198 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Nagaki, T.Koyama, T.Nishino, K.Shimizu, Y.Maki, and K.Ogura: "An Artificial Substrate for the Thermostable Farnesyl Diphosphate Synthase from Bacillus stearothermophilus" Chem.Lett.497-498 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] T.Nishino: "Early Steps of Biosynthesis of Ether Lipids in Archaebacteria." J.Jpn.Oil Chem.soc.46. 25-34 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] K.Kubo, A.Sakamoto, A.Kobayashi, Z.Rybka, Y.Konno, H.Nakagawa, T.Nishino, and H.Takatsuji: "Cys2/His2 Zinc-finger Protein family of Petunia : Evolution and General Mechanism of Target-sequence Recognition" Nucleic Acid Res.(in press.). (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] S.-i.Ohnuma, H.Hemmi, T.Koyama, K.Ogura, and T.Nishino: "Recognition of Allylic substrates in Sulfolobus acidocaldarius Geranylgeranyl Diphosphate Synthase.-Analysis Using Mutated Enzymes and Artificial Allylic Substrates-" j.Biochem.(in press.). (1998)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Hemmi, S.-i.Ohnuma, k.Nagaoka, and T.Nishino: "Identification of Genes that Affect the Lycopene Formation in Escherichia coli transformed with Carotenoid Biosynthetic Genes. -Candidates for Early Steps of Isoprenoid Biosynthesis-" J.Biochem.(in press.). (1998)

    • Description
      「研究成果報告書概要(欧文)」より

URL: 

Published: 1999-03-16  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi