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1997 Fiscal Year Final Research Report Summary

Development of High-Performance Gene Diagnosis System for Common Diseases Using Capillary Electrophoresis

Research Project

Project/Area Number 08672490
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Physical pharmacy
Research InstitutionThe University of Tokushima (1997)
Kobe Pharmaceutical University (1996)

Principal Investigator

BABA Yoshinobu  The Univ.of Tokushima, Faculty of Pharm.Sci., Professor, 薬学部, 教授 (30183916)

Project Period (FY) 1996 – 1997
KeywordsCapillary Electrophoresis / PCR / Gene Dianosis / Cancer / Alzheimer's disease / Heart Disease
Research Abstract

Many human diseases are caused by small alterations in DNA sequence of the disease-causing genes. The alterations in DNA sequence include many types of mutation and polymorphism on disease-causing genes, such as one or several nucleotides replacement, deletion or insertion of some sequence, differences in a variable number of tandem repeat (VNTR) locus, and the instability of microsatellite repeat. DNA diagnosis for human diseases is, therefore, realized by the analysis of the alterations in the DNA sequence of disease-causing genes. In this study, we developed multicolor detectable laser-induced fluorescence (LIF) detection system for capillary electrophoresis and capillary array electrophoresis, and examined the efficiency and the performance of the systems coupled with polymerase chain reaction (PCR) technique for rapid genotyping of disease-causing genes and high-speed DNA diagnosis for human diseases. The system is successfully applied to rapid genotyping of apolipoprotein E gene (APOE) and p53 tumor suppressor gene through detection of one nucleotide replacement, apolipoprotein B gene (APOB) through typing of its VNTR locus, detection of an expansion for triplet repeat, and DNA mismatch repair gene through microsatellite instability analysis. Additionally, the systems are successfully applied to DNA diagnosis for cancer (p53 and DNA mismatch repair gene), Alzheimer's disease (APOE), coronary heart disease (APOB), and myotonic dystrophy (triplet repeat). In these instances, many data shown here demonstrate that capillary electrophoresis coupled with the PCR technique is a promising technology for DNA diagnosis of human diseases with high throughput, high accuracy, less labor-intensive, and cost effectiveness.

  • Research Products

    (48 results)

All Other

All Publications (48 results)

  • [Publications] Y.Baba: "Capillary Affinity Gel Electrophoresis:New Tool for Detection of the Mutation on DNA" Mol.Biotechnol.6・2. 143-153 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Baba: "Analysis of Disease-Causing Genes and DNA Based Drugs by Capillary Electrophoresis:Towards DNA Diagnosis and Gene Therapy for Human Diseases" J.Chromatogr.B.687. 271-302 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 角田 ちぬよ: "DNA診断へのキャピラリー電気泳動の応用" Jpn.J.Electrophoresis. 40・3. 161-165 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 馬場 嘉信: "電気泳動チップによるヒトゲノムの超高速解析" ファルマシア. 32・5. 528-529 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Ueda: "Is Higher Concentration of Linear Polyacrylamide Not Suitable for the Capillary Electrohporetic Separation of Large DNA?" Anal.Sci.13・1. 109-112 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] M.Ueda: "Electrophoresis of Long DNA Molecules in Linear Polyacrylamide Solution" Biophys.Chem.(発表予定).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] H.Inoue: "Enhanced Separation of DNA Sequencing Products by Capillary Electrophoresis Using Stepwise Gradient to Electric Field Strength" J.Chromatogr.A.(発表予定).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Baba: "Base-Specific Separation of Oligodeoxynucleotides by Capillary Affinity Gel Electrophoresis" Electrophoresis. (発表予定).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] A.Nishimura: "Analysis of Variable Number of Tandem Repeat Size of Heart Disease Causing Gene by Capillary Electrophoresis with Laser-Induces Fluorescence Detector" Chem.Pharm.Bull.(発表予定).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Baba: "Simultaneous Genotyping of CETP Gene and TBG Gene by Duplex PCR-RFLP Analysis Using Capillary Electrophoresis" J.Chromatogr.B.(発表予定).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Baba: "Simultaneous Genotyping of CETP Gene and TBG Gene by Duplex PCR-RFLP Analysis Using Capillary Electrophoresis" J.Chromatogr.B.(発表予定).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Baba: "CA Repeat Analysis by Capillary Electrophoresis in Non-denaturing Polymer Solutions." Analyst. (発表予定).

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 馬場 嘉信: "遺伝子分析のためのキャピラリー電気泳動法" 臨床検査. 41・5. 569-583 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 馬場 嘉信: "キャピラリー電気泳動によるヒト・ゲノム解析技術の開発と応用" 薬学雑誌. 117・5. 265-281 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 馬場 嘉信: "マイクロデバイス技術を用いたDNAの超高速分離" 高分子. 46・12. 894-894 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 馬場 嘉信: "キャピラリー電気泳動によるDNAシークエンシングと遺伝子診断" 医学のあゆみ. 183・4. 285-289 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 明石 満: "核酸アナローグを用いたキャピラリーアフィニティーゲル電気泳動によるオリゴデオキシヌクレオチドの塩基選択的分離" Jasco Report. 39・2. 37-43 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 馬場 嘉信: "マイクロマシ-ニングと流れ分析法のマイクロチップ化" J.Flow Injection Analysis. 14・2. 131-140 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 中村 洋: "機器分析の基礎" 朝倉書店, 160 (1996)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 梅澤 善夫: "最新の分離・精製・検出法" エヌ・ティー・エス出版, 1039 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 阿部 正彦: "ゲルテクノロジー" サイエンスフォーラム, 358 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 長田 義仁: "ゲルハンドブック" エヌ・ティー・エス出版, 808 (1997)

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 井上 晴夫: "分析科学III" 丸善(発表予定),

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] 木村 彰方: "医療におけるバイオテクノロジー" 医薬ジャーナル(発表予定),

    • Description
      「研究成果報告書概要(和文)」より
  • [Publications] Y.Baba: "Capillary Affinity Gel Electrophoresis : New Tool for Detection of the Mutation on DNA" Mol.Biotechnol.6 (2). 143-153 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Analysis of Disease-Causing Genes and DNA Based Drugs by Capillary Electrophoresis" J.Chromatogr.B.687. 271-302 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] C.Sumita: "Application of Capillary Electrophoresis to DNA Diagnosis" Jpn.J.Electrophoresis. 40 (3). 161-165 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Ultra-fast Analysis of Human Genome by Electrophoresis Chip" Pharmacia. 32 (5). 528-529 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Ueda: "Is Higher Concentration of Linear Polyacrylamide Not Suitable for the Capillary Electrohporetic Separation of Large DNA ?" Anal.Sci.13 (1). 109-112 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Ueda: "Electrophoresis of Long DNA Molecules in Linear Polyacrylamide Solution" Biophys.Chem.(in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Inoue: "Enhanced Separation of DNA Sequencing Products by Capillary Electrophoresis Using Stepwise Gradient of Electric Field Strength" J.Chromatogr.A. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Base-Specific Separation of Oligodeoxynucleotides by Capillary Affinity Gel Electrophoresis" Electrophoresis. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] A.Nishimura: "Analysis of Variable Number of Tandem Repeat Size of Heart Disease Causing Gene by CE with Laser-Induces Fluorescence Detector" Chem.Pharm.Bull.(in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Simultaneous Genotyping of CETP Gene and TBG Gene by Duplex PCR-RFLP Analysis Using Capillary Electrophoresis" J.Chromatogr.B.(in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Capillary Affinity Gel Electrophoresis : New Tool for Specific Recognition of DNA Sequence and the Mutation Detection of DNA" J.Chromatogr.B.(in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "CA Repeat Analysis by Capillary Electrophoresis in Non-denaturing Polymer Solutions." Analyst. (in press).

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Capillary Electrophoresis of Gene Analysis" Rinsho Kensa. 41 (5). 569-583 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Development of Analytical Technologies of Human Genome by Capillary Electrophoresis" Yakugaku Zasshi. 117 (5). 265-281 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Ultra-fast Separation of DNA by Microdevice Technology" Koubunshi. 46 (12). 894-894 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "DNA Sequencing and Gene Diagnosis by Capillary Electrophoresis" Igakuno Ayumi. 184 (4). 285-289 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Akashi: "Base-specific Separation of Oligonucleotides by Capillary Affinity Gel Electrophoresis" Jasco Report. 39 (2). 37-43 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Baba: "Micromachining and Microfabrication of Flow Analysis" J.Flow Injection Analysis. 14 (2). 131-140 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Nakamura: Introduction of Instrumental Analysis. Asakura Shoten, 160 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Umezawa: New Technologies for Separation and Detection. NTS Publishers, 1039 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] M.Abe: Gel Technology. Science Forum, 358 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] Y.Nagata: Gel Handbook. NTS Publishers, 808 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Inoue: Analytical Chemistry III. Maruzen (in press),

    • Description
      「研究成果報告書概要(欧文)」より
  • [Publications] H.Kimura: Biotechnology in Medicine. Iyaku Journal (in press),

    • Description
      「研究成果報告書概要(欧文)」より

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Published: 1999-03-16  

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